RNA–Protein interactions for RNA: ENST00000635614.1

CD55-211, Transcript of CD55 molecule (Cromer blood group), humanhuman

TSL 5

Gene CD55, Length 1,145 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD55-211ENST00000635614 CHD1O14646 1710 aa18.1■□□□□ 0.49
CD55-211ENST00000635614 BIVM-ERCC5R4GMW8 1640 aa18.1■□□□□ 0.49
CD55-211ENST00000635614 SNAPC4Q5SXM2 1469 aa18.08■□□□□ 0.49
CD55-211ENST00000635614 SYNJ2O15056 1496 aa18.06■□□□□ 0.48
CD55-211ENST00000635614 PBRM1Q86U86 1689 aa18.03■□□□□ 0.48
CD55-211ENST00000635614 SYNJ1O43426 1573 aa18.03■□□□□ 0.48
CD55-211ENST00000635614 ABCA5Q8WWZ7 1642 aa18.02■□□□□ 0.48
CD55-211ENST00000635614 RIMBP3CA6NJZ7 1639 aa18.01■□□□□ 0.47
CD55-211ENST00000635614 RIMBP3BA6NNM3 1639 aa18.01■□□□□ 0.47
CD55-211ENST00000635614 RIMBP3Q9UFD9 1639 aa18.01■□□□□ 0.47
CD55-211ENST00000635614 ARHGEF11O15085 1522 aa18.01■□□□□ 0.47
CD55-211ENST00000635614 ERICH3Q5RHP9 1530 aa17.94■□□□□ 0.46
CD55-211ENST00000635614 FHAD1B1AJZ9 1412 aa17.92■□□□□ 0.46
CD55-211ENST00000635614 CYB5RLQ6IPT4 315 aa17.91■□□□□ 0.46
CD55-211ENST00000635614 CLASP1Q7Z460 1538 aa17.91■□□□□ 0.46
CD55-211ENST00000635614 GRIN2AQ12879 1464 aa17.88■□□□□ 0.45
CD55-211ENST00000635614 MYCNP04198 464 aaPredicted RBP17.87■□□□□ 0.45
CD55-211ENST00000635614 ADAMTS12P58397 1594 aa17.87■□□□□ 0.45
CD55-211ENST00000635614 KIF27Q86VH2 1401 aa17.85■□□□□ 0.45
CD55-211ENST00000635614 ARAP1Q96P48 1450 aa17.81■□□□□ 0.44
CD55-211ENST00000635614 NUP160Q12769 1436 aa17.81■□□□□ 0.44
CD55-211ENST00000635614 DCAF8L1A6NGE4 600 aa17.78■□□□□ 0.44
CD55-211ENST00000635614 ATXN8OSP0DMR3 200 aa17.75■□□□□ 0.43
CD55-211ENST00000635614 CEP170Q5SW79 1584 aa17.74■□□□□ 0.43
CD55-211ENST00000635614 CUL7Q14999 1698 aa17.74■□□□□ 0.43
CD55-211ENST00000635614 IGF1RP08069 1367 aa17.73■□□□□ 0.43
CD55-211ENST00000635614 JPH4Q96JJ6 628 aa17.7■□□□□ 0.42
CD55-211ENST00000635614 SHROOM2Q13796 1616 aa17.68■□□□□ 0.42
CD55-211ENST00000635614 TRHP20396 242 aaPredicted RBP17.67■□□□□ 0.42
CD55-211ENST00000635614 CARMIL1Q5VZK9 1371 aa17.66■□□□□ 0.42
CD55-211ENST00000635614 CACNB1Q02641 598 aaPredicted RBP17.64■□□□□ 0.41
CD55-211ENST00000635614 KIAA0586Q9BVV6 1533 aa17.63■□□□□ 0.41
CD55-211ENST00000635614 GRWD1Q9BQ67 446 aaKnown RBP eCLIP17.63■□□□□ 0.41
CD55-211ENST00000635614 PRG4Q92954 1404 aaPredicted RBP17.63■□□□□ 0.41
CD55-211ENST00000635614 RUSC2Q8N2Y8 1516 aa17.6■□□□□ 0.41
CD55-211ENST00000635614 ERCC6L2Q5T890 1561 aa17.55■□□□□ 0.4
CD55-211ENST00000635614 NPM1P06748 294 aaKnown RBP eCLIP17.54■□□□□ 0.4
CD55-211ENST00000635614 RAPGEF2Q9Y4G8 1499 aa17.53■□□□□ 0.4
CD55-211ENST00000635614 CARMIL2Q6F5E8 1435 aa17.53■□□□□ 0.4
CD55-211ENST00000635614 IQGAP2Q13576 1575 aa17.47■□□□□ 0.39
CD55-211ENST00000635614 U3KPZ7 1027 aaPredicted RBP17.45■□□□□ 0.38
CD55-211ENST00000635614 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP17.43■□□□□ 0.38
CD55-211ENST00000635614 HNRNPUL2Q1KMD3 747 aaKnown RBP17.43■□□□□ 0.38
CD55-211ENST00000635614 FAM9AQ8IZU1 332 aaPredicted RBP17.43■□□□□ 0.38
CD55-211ENST00000635614 PTPRGP23470 1445 aa17.43■□□□□ 0.38
CD55-211ENST00000635614 TNIKQ9UKE5 1360 aa17.42■□□□□ 0.38
CD55-211ENST00000635614 EEA1Q15075 1411 aa17.4■□□□□ 0.38
CD55-211ENST00000635614 SAMD1Q6SPF0 538 aaPredicted RBP17.39■□□□□ 0.37
CD55-211ENST00000635614 PRXQ9BXM0 1461 aa17.37■□□□□ 0.37
CD55-211ENST00000635614 UGGT2Q9NYU1 1516 aa17.37■□□□□ 0.37
CD55-211ENST00000635614 GOLGA3Q08378 1498 aa17.35■□□□□ 0.37
CD55-211ENST00000635614 MAPKBP1O60336 1514 aa17.34■□□□□ 0.37
CD55-211ENST00000635614 CTTNBP2Q8WZ74 1663 aa17.34■□□□□ 0.37
CD55-211ENST00000635614 ATF5Q9Y2D1 282 aaPredicted RBP17.33■□□□□ 0.36
CD55-211ENST00000635614 ADCY10Q96PN6 1610 aa17.32■□□□□ 0.36
CD55-211ENST00000635614 TTBK1Q5TCY1 1321 aaPredicted RBP17.31■□□□□ 0.36
CD55-211ENST00000635614 DISP1Q96F81 1524 aa17.31■□□□□ 0.36
CD55-211ENST00000635614 UHRF1BP1LA0JNW5 1464 aa17.3■□□□□ 0.36
CD55-211ENST00000635614 UACAQ9BZF9 1416 aa17.3■□□□□ 0.36
CD55-211ENST00000635614 FAM69CQ0P6D2 419 aa17.29■□□□□ 0.36
CD55-211ENST00000635614 ABCC10Q5T3U5 1492 aa17.29■□□□□ 0.36
CD55-211ENST00000635614 ABCC2Q92887 1545 aa17.27■□□□□ 0.36
CD55-211ENST00000635614 KIAA0556O60303 1618 aa17.27■□□□□ 0.36
CD55-211ENST00000635614 KIF13AQ9H1H9 1805 aa17.24■□□□□ 0.35
CD55-211ENST00000635614 PLB1Q6P1J6 1458 aa17.24■□□□□ 0.35
CD55-211ENST00000635614 DIP2BQ9P265 1576 aa17.19■□□□□ 0.34
CD55-211ENST00000635614 KDM5BQ9UGL1 1544 aa17.18■□□□□ 0.34
CD55-211ENST00000635614 ASXL2Q76L83 1435 aa17.17■□□□□ 0.34
CD55-211ENST00000635614 KIF21BO75037 1637 aa17.13■□□□□ 0.33
CD55-211ENST00000635614 GLI2P10070 1586 aa17.12■□□□□ 0.33
CD55-211ENST00000635614 ZCCHC11Q5TAX3 1644 aaKnown RBP17.1■□□□□ 0.33
CD55-211ENST00000635614 APLP2Q06481 763 aa17.1■□□□□ 0.33
CD55-211ENST00000635614 ABCA8O94911 1581 aa17.1■□□□□ 0.33
CD55-211ENST00000635614 FKBP8Q14318 412 aa17.08■□□□□ 0.32
CD55-211ENST00000635614 P3H3Q8IVL6 736 aa17.08■□□□□ 0.32
CD55-211ENST00000635614 SAMD9Q5K651 1589 aa17.07■□□□□ 0.32
CD55-211ENST00000635614 UBTFP17480 764 aaKnown RBP17.07■□□□□ 0.32
CD55-211ENST00000635614 TSPOAP1O95153 1857 aa17.07■□□□□ 0.32
CD55-211ENST00000635614 EPRSP07814 1512 aaKnown RBP17.06■□□□□ 0.32
CD55-211ENST00000635614 WDR7Q9Y4E6 1490 aa17.06■□□□□ 0.32
CD55-211ENST00000635614 TEX14Q8IWB6 1497 aa17.05■□□□□ 0.32
CD55-211ENST00000635614 EFCAB5A4FU69 1503 aa17.04■□□□□ 0.32
CD55-211ENST00000635614 KDM6BO15054 1643 aa17.03■□□□□ 0.32
CD55-211ENST00000635614 RANGAP1P46060 587 aaPredicted RBP17.02■□□□□ 0.32
CD55-211ENST00000635614 KCNH8Q96L42 1107 aa17■□□□□ 0.31
CD55-211ENST00000635614 ZNF219Q9P2Y4 722 aaPredicted RBP17■□□□□ 0.31
CD55-211ENST00000635614 MAP3K4Q9Y6R4 1608 aa16.99■□□□□ 0.31
CD55-211ENST00000635614 RAPGEF6Q8TEU7 1601 aa16.99■□□□□ 0.31
CD55-211ENST00000635614 ATP10BO94823 1461 aa16.97■□□□□ 0.31
CD55-211ENST00000635614 CD109Q6YHK3 1445 aa16.96■□□□□ 0.31
CD55-211ENST00000635614 CFAP43Q8NDM7 1665 aa16.96■□□□□ 0.31
CD55-211ENST00000635614 FHOD3Q2V2M9 1422 aa16.95■□□□□ 0.3
CD55-211ENST00000635614 PLEKHD1A6NEE1 506 aa16.94■□□□□ 0.3
CD55-211ENST00000635614 MAGI3Q5TCQ9 1506 aa16.93■□□□□ 0.3
CD55-211ENST00000635614 FMN1Q68DA7 1419 aa16.93■□□□□ 0.3
CD55-211ENST00000635614 PHLDB1Q86UU1 1377 aa16.92■□□□□ 0.3
CD55-211ENST00000635614 PPRC1Q5VV67 1664 aaKnown RBP16.92■□□□□ 0.3
CD55-211ENST00000635614 ARID3CA6NKF2 412 aa16.91■□□□□ 0.3
CD55-211ENST00000635614 RNF39Q9H2S5 420 aa16.89■□□□□ 0.29
CD55-211ENST00000635614 CDK11AQ9UQ88 783 aaPredicted RBP16.89■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms