RNA–Protein interactions for RNA: ENST00000630224.2

TCF4-269, Transcript of transcription factor 4, humanhuman

TSL 5

Gene TCF4, Length 501 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-269ENST00000630224 WIZO95785 1651 aa11.29□□□□□ -0.6
TCF4-269ENST00000630224 CHRDL2Q6WN34 429 aa11.28□□□□□ -0.6
TCF4-269ENST00000630224 SPDYE1Q8NFV5 336 aaPredicted RBP11.28□□□□□ -0.6
TCF4-269ENST00000630224 CLEC11AQ9Y240 323 aa11.28□□□□□ -0.6
TCF4-269ENST00000630224 FANCD2Q9BXW9 1451 aa11.25□□□□□ -0.61
TCF4-269ENST00000630224 RIMBP3CA6NJZ7 1639 aa11.25□□□□□ -0.61
TCF4-269ENST00000630224 RIMBP3BA6NNM3 1639 aa11.25□□□□□ -0.61
TCF4-269ENST00000630224 RIMBP3Q9UFD9 1639 aa11.25□□□□□ -0.61
TCF4-269ENST00000630224 PITPNM1O00562 1244 aa11.24□□□□□ -0.61
TCF4-269ENST00000630224 URB2Q14146 1524 aaKnown RBP11.19□□□□□ -0.62
TCF4-269ENST00000630224 FKBP8Q14318 412 aa11.19□□□□□ -0.62
TCF4-269ENST00000630224 POTEHQ6S545 545 aa11.15□□□□□ -0.62
TCF4-269ENST00000630224 ARHGEF11O15085 1522 aa11.14□□□□□ -0.63
TCF4-269ENST00000630224 CFTRP13569 1480 aa11.14□□□□□ -0.63
TCF4-269ENST00000630224 CYB5RLQ6IPT4 315 aa11.14□□□□□ -0.63
TCF4-269ENST00000630224 STAG3Q9UJ98 1225 aa11.14□□□□□ -0.63
TCF4-269ENST00000630224 PRR29P0C7W0 189 aa11.13□□□□□ -0.63
TCF4-269ENST00000630224 ZNF608Q9ULD9 1512 aaPredicted RBP11.13□□□□□ -0.63
TCF4-269ENST00000630224 PRDM2Q13029 1718 aa11.08□□□□□ -0.64
TCF4-269ENST00000630224 PIP4P2Q8N4L2 257 aa11.07□□□□□ -0.64
TCF4-269ENST00000630224 CHD1O14646 1710 aa11.06□□□□□ -0.64
TCF4-269ENST00000630224 FXR2P51116 673 aaKnown RBP eCLIP11.05□□□□□ -0.64
TCF4-269ENST00000630224 TOP2AP11388 1531 aaKnown RBP11.04□□□□□ -0.64
TCF4-269ENST00000630224 EIF4G3O43432 1585 aaKnown RBP11.04□□□□□ -0.64
TCF4-269ENST00000630224 IFT140Q96RY7 1462 aa11.04□□□□□ -0.64
TCF4-269ENST00000630224 RSF1Q96T23 1441 aaPredicted RBP11.01□□□□□ -0.65
TCF4-269ENST00000630224 ARAP1Q96P48 1450 aa11.01□□□□□ -0.65
TCF4-269ENST00000630224 PROM2Q8N271 834 aa11.01□□□□□ -0.65
TCF4-269ENST00000630224 TOPBP1Q92547 1522 aa11□□□□□ -0.65
TCF4-269ENST00000630224 PRKAR2AP13861 404 aaKnown RBP11□□□□□ -0.65
TCF4-269ENST00000630224 AQRO60306 1485 aaKnown RBP eCLIP11□□□□□ -0.65
TCF4-269ENST00000630224 CCDC88BA6NC98 1476 aa10.95□□□□□ -0.66
TCF4-269ENST00000630224 TARBP1Q13395 1621 aaKnown RBP10.94□□□□□ -0.66
TCF4-269ENST00000630224 CHADLQ6NUI6 762 aa10.93□□□□□ -0.66
TCF4-269ENST00000630224 DNMBPQ6XZF7 1577 aa10.93□□□□□ -0.66
TCF4-269ENST00000630224 PLEKHG5O94827 1062 aa10.92□□□□□ -0.66
TCF4-269ENST00000630224 FBXO3Q9UK99 471 aa10.9□□□□□ -0.66
TCF4-269ENST00000630224 ABCC8Q09428 1581 aa10.9□□□□□ -0.67
TCF4-269ENST00000630224 RAD54L2Q9Y4B4 1467 aa10.88□□□□□ -0.67
TCF4-269ENST00000630224 TDRD9Q8NDG6 1382 aaKnown RBP10.88□□□□□ -0.67
TCF4-269ENST00000630224 POLA1P09884 1462 aaPredicted RBP10.87□□□□□ -0.67
TCF4-269ENST00000630224 HAX1O00165 279 aa10.85□□□□□ -0.67
TCF4-269ENST00000630224 SUPT5HO00267 1087 aaKnown RBP10.85□□□□□ -0.67
TCF4-269ENST00000630224 SNAPC4Q5SXM2 1469 aa10.85□□□□□ -0.67
TCF4-269ENST00000630224 CLASP1Q7Z460 1538 aa10.84□□□□□ -0.67
TCF4-269ENST00000630224 MIER1Q8N108 512 aa10.83□□□□□ -0.68
TCF4-269ENST00000630224 PLCD3Q8N3E9 789 aa10.83□□□□□ -0.68
TCF4-269ENST00000630224 CHMP7Q8WUX9 453 aaPredicted RBP10.83□□□□□ -0.68
TCF4-269ENST00000630224 CREBZFQ9NS37 354 aa10.83□□□□□ -0.68
TCF4-269ENST00000630224 SOGA1O94964 1423 aa10.83□□□□□ -0.68
TCF4-269ENST00000630224 SYNJ1O43426 1573 aa10.82□□□□□ -0.68
TCF4-269ENST00000630224 FARP1Q9Y4F1 1045 aaPredicted RBP10.81□□□□□ -0.68
TCF4-269ENST00000630224 NPM1P06748 294 aaKnown RBP eCLIP10.78□□□□□ -0.68
TCF4-269ENST00000630224 FGD5Q6ZNL6 1462 aa10.78□□□□□ -0.68
TCF4-269ENST00000630224 GAPVD1Q14C86 1478 aa10.77□□□□□ -0.69
TCF4-269ENST00000630224 PBRM1Q86U86 1689 aa10.75□□□□□ -0.69
TCF4-269ENST00000630224 GRIN2BQ13224 1484 aa10.74□□□□□ -0.69
TCF4-269ENST00000630224 MAGI1Q96QZ7 1491 aaPredicted RBP10.74□□□□□ -0.69
TCF4-269ENST00000630224 ZBTB47Q9UFB7 747 aaPredicted RBP10.74□□□□□ -0.69
TCF4-269ENST00000630224 SYNJ2O15056 1496 aa10.74□□□□□ -0.69
TCF4-269ENST00000630224 ERCC6L2Q5T890 1561 aa10.73□□□□□ -0.69
TCF4-269ENST00000630224 CUX1P39880 1505 aa10.72□□□□□ -0.69
TCF4-269ENST00000630224 WDR97A6NE52 1622 aa10.71□□□□□ -0.69
TCF4-269ENST00000630224 PAK3O75914 559 aaPredicted RBP10.7□□□□□ -0.7
TCF4-269ENST00000630224 CD44P16070 742 aaKnown RBP10.69□□□□□ -0.7
TCF4-269ENST00000630224 VASPP50552 380 aaPredicted RBP10.69□□□□□ -0.7
TCF4-269ENST00000630224 KIF13AQ9H1H9 1805 aa10.68□□□□□ -0.7
TCF4-269ENST00000630224 C19orf67A6NJJ6 358 aa10.68□□□□□ -0.7
TCF4-269ENST00000630224 KLHL34Q8N239 644 aa10.65□□□□□ -0.7
TCF4-269ENST00000630224 SP7Q8TDD2 431 aaPredicted RBP10.64□□□□□ -0.71
TCF4-269ENST00000630224 CEP170Q5SW79 1584 aa10.64□□□□□ -0.71
TCF4-269ENST00000630224 ABCA5Q8WWZ7 1642 aa10.63□□□□□ -0.71
TCF4-269ENST00000630224 MNX1P50219 401 aaPredicted RBP10.63□□□□□ -0.71
TCF4-269ENST00000630224 GRIN2AQ12879 1464 aa10.61□□□□□ -0.71
TCF4-269ENST00000630224 ZRANB1Q9UGI0 708 aa10.61□□□□□ -0.71
TCF4-269ENST00000630224 ABCA10Q8WWZ4 1543 aa10.58□□□□□ -0.72
TCF4-269ENST00000630224 ADAMTS12P58397 1594 aa10.58□□□□□ -0.72
TCF4-269ENST00000630224 EVX2Q03828 476 aa10.57□□□□□ -0.72
TCF4-269ENST00000630224 ILDR1Q86SU0 546 aaPredicted RBP10.57□□□□□ -0.72
TCF4-269ENST00000630224 SHROOM2Q13796 1616 aa10.57□□□□□ -0.72
TCF4-269ENST00000630224 TSPOAP1O95153 1857 aa10.57□□□□□ -0.72
TCF4-269ENST00000630224 FAM69CQ0P6D2 419 aa10.56□□□□□ -0.72
TCF4-269ENST00000630224 TSPYL2Q9H2G4 693 aaPredicted RBP10.56□□□□□ -0.72
TCF4-269ENST00000630224 NUP160Q12769 1436 aa10.55□□□□□ -0.72
TCF4-269ENST00000630224 PRG4Q92954 1404 aaPredicted RBP10.54□□□□□ -0.72
TCF4-269ENST00000630224 KDM4FA0A1W2PPD8 638 aa10.53□□□□□ -0.72
TCF4-269ENST00000630224 FAM212AQ96EL1 285 aa10.52□□□□□ -0.73
TCF4-269ENST00000630224 KDM6BO15054 1643 aa10.51□□□□□ -0.73
TCF4-269ENST00000630224 FHAD1B1AJZ9 1412 aa10.5□□□□□ -0.73
TCF4-269ENST00000630224 ZNF579Q8NAF0 562 aaKnown RBP10.5□□□□□ -0.73
TCF4-269ENST00000630224 WRNQ14191 1432 aaPredicted RBP eCLIP10.5□□□□□ -0.73
TCF4-269ENST00000630224 ABCC10Q5T3U5 1492 aa10.49□□□□□ -0.73
TCF4-269ENST00000630224 DIP2BQ9P265 1576 aa10.49□□□□□ -0.73
TCF4-269ENST00000630224 CLCN6P51797 869 aa10.49□□□□□ -0.73
TCF4-269ENST00000630224 JPH4Q96JJ6 628 aa10.49□□□□□ -0.73
TCF4-269ENST00000630224 RASEFQ8IZ41 740 aa10.48□□□□□ -0.73
TCF4-269ENST00000630224 SPOCK2Q92563 424 aa10.47□□□□□ -0.73
TCF4-269ENST00000630224 ADCY10Q96PN6 1610 aa10.47□□□□□ -0.73
TCF4-269ENST00000630224 NUBP1P53384 320 aa10.46□□□□□ -0.73
TCF4-269ENST00000630224 DCAF8Q5TAQ9 597 aa10.46□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 241.4 ms