RNA–Protein interactions for RNA: ENST00000630224.2

TCF4-269, Transcript of transcription factor 4, humanhuman

TSL 5

Gene TCF4, Length 501 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-269ENST00000630224 AEBP2Q6ZN18 517 aaPredicted RBP20.5■□□□□ 0.87
TCF4-269ENST00000630224 CHIC1Q5VXU3 224 aa19.91■□□□□ 0.78
TCF4-269ENST00000630224 SENP3Q9H4L4 574 aaPredicted RBP17.58■□□□□ 0.4
TCF4-269ENST00000630224 PHF23Q9BUL5 403 aaPredicted RBP17.4■□□□□ 0.38
TCF4-269ENST00000630224 FOXD1Q16676 465 aa16.24■□□□□ 0.19
TCF4-269ENST00000630224 PLPPR3Q6T4P5 718 aa16.16■□□□□ 0.18
TCF4-269ENST00000630224 ADRA2BP18089 450 aa15.46■□□□□ 0.07
TCF4-269ENST00000630224 PPP6R1Q9UPN7 881 aa15.43■□□□□ 0.06
TCF4-269ENST00000630224 PIAS4Q8N2W9 510 aaPredicted RBP15.37■□□□□ 0.05
TCF4-269ENST00000630224 MSH5O43196 834 aa15.17■□□□□ 0.02
TCF4-269ENST00000630224 NISCHQ9Y2I1 1504 aa14.74□□□□□ -0.05
TCF4-269ENST00000630224 SCAF1Q9H7N4 1312 aaKnown RBP14.29□□□□□ -0.12
TCF4-269ENST00000630224 PPP4R3CPQ6ZMV5 832 aa14.18□□□□□ -0.14
TCF4-269ENST00000630224 POTEDQ86YR6 584 aa14.07□□□□□ -0.16
TCF4-269ENST00000630224 MAPK8IP2Q13387 824 aaPredicted RBP14.06□□□□□ -0.16
TCF4-269ENST00000630224 DMRT2Q9Y5R5 561 aa13.94□□□□□ -0.18
TCF4-269ENST00000630224 NCBP3Q53F19 620 aaKnown RBP13.85□□□□□ -0.19
TCF4-269ENST00000630224 CNKSR2Q8WXI2 1034 aa13.85□□□□□ -0.19
TCF4-269ENST00000630224 ABCC9O60706 1549 aa13.74□□□□□ -0.21
TCF4-269ENST00000630224 RNF216Q9NWF9 866 aaPredicted RBP13.61□□□□□ -0.23
TCF4-269ENST00000630224 KCNA4P22459 653 aa13.6□□□□□ -0.23
TCF4-269ENST00000630224 HOXD11P31277 338 aaPredicted RBP13.55□□□□□ -0.24
TCF4-269ENST00000630224 NPM3O75607 178 aaKnown RBP13.52□□□□□ -0.25
TCF4-269ENST00000630224 DCAF8L1A6NGE4 600 aa13.51□□□□□ -0.25
TCF4-269ENST00000630224 CCDC180Q9P1Z9 1646 aa13.35□□□□□ -0.27
TCF4-269ENST00000630224 DNAJC5BQ9UF47 199 aa13.16□□□□□ -0.3
TCF4-269ENST00000630224 GRWD1Q9BQ67 446 aaKnown RBP eCLIP13.05□□□□□ -0.32
TCF4-269ENST00000630224 SLC4A1APQ9BWU0 796 aaKnown RBP12.99□□□□□ -0.33
TCF4-269ENST00000630224 RNF39Q9H2S5 420 aa12.89□□□□□ -0.35
TCF4-269ENST00000630224 RB1CC1Q8TDY2 1594 aa12.87□□□□□ -0.35
TCF4-269ENST00000630224 CACNB1Q02641 598 aaPredicted RBP12.81□□□□□ -0.36
TCF4-269ENST00000630224 C1QBPQ07021 282 aaKnown RBP12.78□□□□□ -0.36
TCF4-269ENST00000630224 PABPN1Q86U42 306 aaKnown RBP eCLIP12.77□□□□□ -0.37
TCF4-269ENST00000630224 SLC4A2P04920 1241 aa12.76□□□□□ -0.37
TCF4-269ENST00000630224 DCAF8L2P0C7V8 631 aa12.73□□□□□ -0.37
TCF4-269ENST00000630224 U3KPZ7 1027 aaPredicted RBP12.7□□□□□ -0.38
TCF4-269ENST00000630224 UNC13AQ9UPW8 1703 aa12.68□□□□□ -0.38
TCF4-269ENST00000630224 NACADO15069 1562 aa12.67□□□□□ -0.38
TCF4-269ENST00000630224 FOXD4L1Q9NU39 408 aa12.64□□□□□ -0.39
TCF4-269ENST00000630224 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP12.63□□□□□ -0.39
TCF4-269ENST00000630224 HNRNPUL2Q1KMD3 747 aaKnown RBP12.63□□□□□ -0.39
TCF4-269ENST00000630224 APLP2Q06481 763 aa12.58□□□□□ -0.4
TCF4-269ENST00000630224 MYCNP04198 464 aaPredicted RBP12.57□□□□□ -0.4
TCF4-269ENST00000630224 SAMD1Q6SPF0 538 aaPredicted RBP12.54□□□□□ -0.4
TCF4-269ENST00000630224 BICRAQ9NZM4 1560 aa12.53□□□□□ -0.4
TCF4-269ENST00000630224 CAPN15O75808 1086 aa12.49□□□□□ -0.41
TCF4-269ENST00000630224 ZBTB22O15209 634 aa12.43□□□□□ -0.42
TCF4-269ENST00000630224 EHMT2Q96KQ7 1210 aa12.42□□□□□ -0.42
TCF4-269ENST00000630224 SPINK5Q9NQ38 1064 aaPredicted RBP12.41□□□□□ -0.42
TCF4-269ENST00000630224 CC2D2AQ9P2K1 1620 aa12.37□□□□□ -0.43
TCF4-269ENST00000630224 TRHP20396 242 aaPredicted RBP12.37□□□□□ -0.43
TCF4-269ENST00000630224 ZNF219Q9P2Y4 722 aaPredicted RBP12.37□□□□□ -0.43
TCF4-269ENST00000630224 CECR2Q9BXF3 1484 aa12.37□□□□□ -0.43
TCF4-269ENST00000630224 MYO15BQ96JP2 1530 aa12.31□□□□□ -0.44
TCF4-269ENST00000630224 CSRNP3Q8WYN3 585 aa12.25□□□□□ -0.45
TCF4-269ENST00000630224 SCRIBQ14160 1630 aa12.25□□□□□ -0.45
TCF4-269ENST00000630224 EIF4G1Q04637 1599 aaKnown RBP12.24□□□□□ -0.45
TCF4-269ENST00000630224 DNAJC5Q9H3Z4 198 aa12.24□□□□□ -0.45
TCF4-269ENST00000630224 DSG3P32926 999 aa12.21□□□□□ -0.45
TCF4-269ENST00000630224 ATXN8OSP0DMR3 200 aa12.19□□□□□ -0.46
TCF4-269ENST00000630224 ABCB7O75027 752 aa12.18□□□□□ -0.46
TCF4-269ENST00000630224 SHROOM4Q9ULL8 1493 aa12.18□□□□□ -0.46
TCF4-269ENST00000630224 ZCCHC6Q5VYS8 1495 aaKnown RBP12.13□□□□□ -0.47
TCF4-269ENST00000630224 ATF5Q9Y2D1 282 aaPredicted RBP12.12□□□□□ -0.47
TCF4-269ENST00000630224 POLA2Q14181 598 aa12.07□□□□□ -0.48
TCF4-269ENST00000630224 DCAF1Q9Y4B6 1507 aa12.06□□□□□ -0.48
TCF4-269ENST00000630224 ZBTB12Q9Y330 459 aaPredicted RBP11.94□□□□□ -0.5
TCF4-269ENST00000630224 ERCC6Q03468 1493 aa11.86□□□□□ -0.51
TCF4-269ENST00000630224 CUX2O14529 1486 aa11.85□□□□□ -0.51
TCF4-269ENST00000630224 FBLN2P98095 1184 aa11.82□□□□□ -0.52
TCF4-269ENST00000630224 RBM42Q9BTD8 480 aaKnown RBP11.77□□□□□ -0.53
TCF4-269ENST00000630224 NESP48681 1621 aa11.72□□□□□ -0.53
TCF4-269ENST00000630224 TRIM41Q8WV44 630 aa11.7□□□□□ -0.54
TCF4-269ENST00000630224 NCAPD3P42695 1498 aa11.69□□□□□ -0.54
TCF4-269ENST00000630224 OSCARQ8IYS5 282 aa11.68□□□□□ -0.54
TCF4-269ENST00000630224 ATAD2BQ9ULI0 1458 aa11.65□□□□□ -0.54
TCF4-269ENST00000630224 THOC2Q8NI27 1593 aaKnown RBP11.62□□□□□ -0.55
TCF4-269ENST00000630224 SMARCA2P51531 1590 aa11.6□□□□□ -0.55
TCF4-269ENST00000630224 SMARCA4P51532 1647 aa11.59□□□□□ -0.55
TCF4-269ENST00000630224 KIF21AQ7Z4S6 1674 aa11.59□□□□□ -0.55
TCF4-269ENST00000630224 MKRN4PQ13434 485 aaPredicted RBP11.58□□□□□ -0.56
TCF4-269ENST00000630224 HMGXB3Q12766 1538 aa11.58□□□□□ -0.56
TCF4-269ENST00000630224 SPDYE2BA6NHP3 402 aa11.54□□□□□ -0.56
TCF4-269ENST00000630224 SPDYE6P0CI01 402 aa11.54□□□□□ -0.56
TCF4-269ENST00000630224 SPDYE2Q495Y8 402 aa11.54□□□□□ -0.56
TCF4-269ENST00000630224 BAZ1BQ9UIG0 1483 aaKnown RBP11.54□□□□□ -0.56
TCF4-269ENST00000630224 AKT1S1Q96B36 256 aa11.52□□□□□ -0.57
TCF4-269ENST00000630224 LAMC3Q9Y6N6 1575 aa11.5□□□□□ -0.57
TCF4-269ENST00000630224 ZNF692Q9BU19 519 aaPredicted RBP11.5□□□□□ -0.57
TCF4-269ENST00000630224 BAZ1AQ9NRL2 1556 aaPredicted RBP11.45□□□□□ -0.58
TCF4-269ENST00000630224 PDS5BQ9NTI5 1447 aa11.44□□□□□ -0.58
TCF4-269ENST00000630224 MROH2BQ7Z745 1585 aa11.4□□□□□ -0.58
TCF4-269ENST00000630224 PEG3Q9GZU2 1588 aa11.4□□□□□ -0.58
TCF4-269ENST00000630224 MRC2Q9UBG0 1479 aa11.38□□□□□ -0.59
TCF4-269ENST00000630224 REM2Q8IYK8 340 aaPredicted RBP11.37□□□□□ -0.59
TCF4-269ENST00000630224 SPDYE4A6NLX3 237 aa11.36□□□□□ -0.59
TCF4-269ENST00000630224 SSUH2Q9Y2M2 353 aa11.36□□□□□ -0.59
TCF4-269ENST00000630224 WDR62O43379 1518 aa11.35□□□□□ -0.59
TCF4-269ENST00000630224 CADPSQ9ULU8 1353 aa11.34□□□□□ -0.59
TCF4-269ENST00000630224 CEP164Q9UPV0 1460 aa11.29□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 83.1 ms