RNA–Protein interactions for RNA: ENST00000629293.1

LINC00550-201, long intergenic non-protein coding RNA 550, humanhuman

TSL 1 (best) BASIC

Gene LINC00550, Length 3,434 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00550-201ENST00000629293 ABCC8Q09428 1581 aa8.57□□□□□ -1.04
LINC00550-201ENST00000629293 PROM2Q8N271 834 aa8.57□□□□□ -1.04
LINC00550-201ENST00000629293 U3KPZ7 1027 aaPredicted RBP8.57□□□□□ -1.04
LINC00550-201ENST00000629293 DNMBPQ6XZF7 1577 aa8.56□□□□□ -1.04
LINC00550-201ENST00000629293 PLCB2Q00722 1185 aa8.55□□□□□ -1.04
LINC00550-201ENST00000629293 ARAP1Q96P48 1450 aa8.54□□□□□ -1.04
LINC00550-201ENST00000629293 PRDM2Q13029 1718 aa8.54□□□□□ -1.04
LINC00550-201ENST00000629293 CHD1O14646 1710 aa8.53□□□□□ -1.04
LINC00550-201ENST00000629293 SNAPC4Q5SXM2 1469 aa8.52□□□□□ -1.04
LINC00550-201ENST00000629293 FGD5Q6ZNL6 1462 aa8.51□□□□□ -1.05
LINC00550-201ENST00000629293 TARBP1Q13395 1621 aaKnown RBP8.51□□□□□ -1.05
LINC00550-201ENST00000629293 MKRN4PQ13434 485 aaPredicted RBP8.48□□□□□ -1.05
LINC00550-201ENST00000629293 GRIN2BQ13224 1484 aa8.46□□□□□ -1.06
LINC00550-201ENST00000629293 CUX1P39880 1505 aa8.46□□□□□ -1.06
LINC00550-201ENST00000629293 SAMD1Q6SPF0 538 aaPredicted RBP8.45□□□□□ -1.06
LINC00550-201ENST00000629293 GAPVD1Q14C86 1478 aa8.44□□□□□ -1.06
LINC00550-201ENST00000629293 ZNF219Q9P2Y4 722 aaPredicted RBP8.44□□□□□ -1.06
LINC00550-201ENST00000629293 SYNJ1O43426 1573 aa8.43□□□□□ -1.06
LINC00550-201ENST00000629293 SYNJ2O15056 1496 aa8.43□□□□□ -1.06
LINC00550-201ENST00000629293 MAGI1Q96QZ7 1491 aaPredicted RBP8.43□□□□□ -1.06
LINC00550-201ENST00000629293 IFNLR1Q8IU57 520 aaPredicted RBP8.42□□□□□ -1.06
LINC00550-201ENST00000629293 TTBK1Q5TCY1 1321 aaPredicted RBP8.41□□□□□ -1.06
LINC00550-201ENST00000629293 PKD2Q13563 968 aa8.4□□□□□ -1.06
LINC00550-201ENST00000629293 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP8.39□□□□□ -1.07
LINC00550-201ENST00000629293 HNRNPUL2Q1KMD3 747 aaKnown RBP8.39□□□□□ -1.07
LINC00550-201ENST00000629293 GRWD1Q9BQ67 446 aaKnown RBP eCLIP8.39□□□□□ -1.07
LINC00550-201ENST00000629293 CLASP1Q7Z460 1538 aa8.39□□□□□ -1.07
LINC00550-201ENST00000629293 WRNQ14191 1432 aaPredicted RBP eCLIP8.38□□□□□ -1.07
LINC00550-201ENST00000629293 SPDYE4A6NLX3 237 aa8.37□□□□□ -1.07
LINC00550-201ENST00000629293 PRKCSHP14314 528 aaPredicted RBP8.37□□□□□ -1.07
LINC00550-201ENST00000629293 VASPP50552 380 aaPredicted RBP8.37□□□□□ -1.07
LINC00550-201ENST00000629293 FBXO3Q9UK99 471 aa8.36□□□□□ -1.07
LINC00550-201ENST00000629293 ERCC6L2Q5T890 1561 aa8.36□□□□□ -1.07
LINC00550-201ENST00000629293 ABCA10Q8WWZ4 1543 aa8.35□□□□□ -1.07
LINC00550-201ENST00000629293 GRIN2AQ12879 1464 aa8.35□□□□□ -1.07
LINC00550-201ENST00000629293 NPM1P06748 294 aaKnown RBP eCLIP8.34□□□□□ -1.07
LINC00550-201ENST00000629293 PBRM1Q86U86 1689 aa8.34□□□□□ -1.07
LINC00550-201ENST00000629293 JPH4Q96JJ6 628 aa8.33□□□□□ -1.08
LINC00550-201ENST00000629293 FAM69CQ0P6D2 419 aa8.32□□□□□ -1.08
LINC00550-201ENST00000629293 WDR97A6NE52 1622 aa8.32□□□□□ -1.08
LINC00550-201ENST00000629293 PRG4Q92954 1404 aaPredicted RBP8.31□□□□□ -1.08
LINC00550-201ENST00000629293 FHAD1B1AJZ9 1412 aa8.31□□□□□ -1.08
LINC00550-201ENST00000629293 ABCA5Q8WWZ7 1642 aa8.3□□□□□ -1.08
LINC00550-201ENST00000629293 CEP170Q5SW79 1584 aa8.3□□□□□ -1.08
LINC00550-201ENST00000629293 KDM2AQ9Y2K7 1162 aa8.3□□□□□ -1.08
LINC00550-201ENST00000629293 HAP1P54257 671 aaPredicted RBP8.29□□□□□ -1.08
LINC00550-201ENST00000629293 NUP160Q12769 1436 aa8.29□□□□□ -1.08
LINC00550-201ENST00000629293 TAOK2Q9UL54 1235 aa8.29□□□□□ -1.08
LINC00550-201ENST00000629293 ADAMTS12P58397 1594 aa8.28□□□□□ -1.08
LINC00550-201ENST00000629293 DCAF8L1A6NGE4 600 aa8.27□□□□□ -1.09
LINC00550-201ENST00000629293 VSIG10Q8N0Z9 540 aa8.26□□□□□ -1.09
LINC00550-201ENST00000629293 TOP2BQ02880 1626 aa8.25□□□□□ -1.09
LINC00550-201ENST00000629293 BCANQ96GW7 911 aa8.25□□□□□ -1.09
LINC00550-201ENST00000629293 ERICH3Q5RHP9 1530 aa8.23□□□□□ -1.09
LINC00550-201ENST00000629293 BIVM-ERCC5R4GMW8 1640 aa8.21□□□□□ -1.1
LINC00550-201ENST00000629293 IGF1RP08069 1367 aa8.19□□□□□ -1.1
LINC00550-201ENST00000629293 PTPRGP23470 1445 aa8.19□□□□□ -1.1
LINC00550-201ENST00000629293 KIF27Q86VH2 1401 aa8.19□□□□□ -1.1
LINC00550-201ENST00000629293 SHROOM2Q13796 1616 aa8.18□□□□□ -1.1
LINC00550-201ENST00000629293 ABCC10Q5T3U5 1492 aa8.18□□□□□ -1.1
LINC00550-201ENST00000629293 TSPOAP1O95153 1857 aa8.17□□□□□ -1.1
LINC00550-201ENST00000629293 KDM4FA0A1W2PPD8 638 aa8.16□□□□□ -1.1
LINC00550-201ENST00000629293 CARMIL1Q5VZK9 1371 aa8.16□□□□□ -1.1
LINC00550-201ENST00000629293 KIF13AQ9H1H9 1805 aa8.16□□□□□ -1.1
LINC00550-201ENST00000629293 RUSC2Q8N2Y8 1516 aa8.16□□□□□ -1.1
LINC00550-201ENST00000629293 KIAA0586Q9BVV6 1533 aa8.16□□□□□ -1.1
LINC00550-201ENST00000629293 ARID3CA6NKF2 412 aa8.15□□□□□ -1.1
LINC00550-201ENST00000629293 BBXQ8WY36 941 aaPredicted RBP8.14□□□□□ -1.11
LINC00550-201ENST00000629293 ADCY10Q96PN6 1610 aa8.14□□□□□ -1.11
LINC00550-201ENST00000629293 CARMIL2Q6F5E8 1435 aa8.14□□□□□ -1.11
LINC00550-201ENST00000629293 SPINK5Q9NQ38 1064 aaPredicted RBP8.13□□□□□ -1.11
LINC00550-201ENST00000629293 KDM6BO15054 1643 aa8.13□□□□□ -1.11
LINC00550-201ENST00000629293 KCNH8Q96L42 1107 aa8.13□□□□□ -1.11
LINC00550-201ENST00000629293 DIP2BQ9P265 1576 aa8.12□□□□□ -1.11
LINC00550-201ENST00000629293 TNIKQ9UKE5 1360 aa8.12□□□□□ -1.11
LINC00550-201ENST00000629293 MAPKBP1O60336 1514 aa8.11□□□□□ -1.11
LINC00550-201ENST00000629293 RANGAP1P46060 587 aaPredicted RBP8.11□□□□□ -1.11
LINC00550-201ENST00000629293 ASXL2Q76L83 1435 aa8.11□□□□□ -1.11
LINC00550-201ENST00000629293 TPRNQ4KMQ1 711 aa8.09□□□□□ -1.11
LINC00550-201ENST00000629293 P3H3Q8IVL6 736 aa8.09□□□□□ -1.11
LINC00550-201ENST00000629293 POLA2Q14181 598 aa8.08□□□□□ -1.12
LINC00550-201ENST00000629293 ILDR1Q86SU0 546 aaPredicted RBP8.08□□□□□ -1.12
LINC00550-201ENST00000629293 RGL2O15211 777 aa8.08□□□□□ -1.12
LINC00550-201ENST00000629293 ABCC2Q92887 1545 aa8.08□□□□□ -1.12
LINC00550-201ENST00000629293 UACAQ9BZF9 1416 aa8.07□□□□□ -1.12
LINC00550-201ENST00000629293 CUL7Q14999 1698 aa8.07□□□□□ -1.12
LINC00550-201ENST00000629293 PLB1Q6P1J6 1458 aa8.06□□□□□ -1.12
LINC00550-201ENST00000629293 APLP2Q06481 763 aa8.06□□□□□ -1.12
LINC00550-201ENST00000629293 IQGAP2Q13576 1575 aa8.06□□□□□ -1.12
LINC00550-201ENST00000629293 PAXIP1Q6ZW49 1069 aaPredicted RBP8.04□□□□□ -1.12
LINC00550-201ENST00000629293 COL17A1Q9UMD9 1497 aaPredicted RBP8.04□□□□□ -1.12
LINC00550-201ENST00000629293 RAPGEF2Q9Y4G8 1499 aa8.04□□□□□ -1.12
LINC00550-201ENST00000629293 TSHZ2Q9NRE2 1034 aa8.03□□□□□ -1.12
LINC00550-201ENST00000629293 ADGRL1O94910 1474 aa8.03□□□□□ -1.12
LINC00550-201ENST00000629293 FAM9AQ8IZU1 332 aaPredicted RBP8.03□□□□□ -1.12
LINC00550-201ENST00000629293 SPOCK2Q92563 424 aa8.03□□□□□ -1.12
LINC00550-201ENST00000629293 DISP1Q96F81 1524 aa8.03□□□□□ -1.12
LINC00550-201ENST00000629293 ECM2O94769 699 aaPredicted RBP8.02□□□□□ -1.13
LINC00550-201ENST00000629293 EPRSP07814 1512 aaKnown RBP8.01□□□□□ -1.13
LINC00550-201ENST00000629293 ARID4BQ4LE39 1312 aaPredicted RBP8□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms