RNA–Protein interactions for RNA: ENST00000628375.2

CHD2-215, Transcript of chromodomain helicase DNA binding protein 2, humanhuman

TSL 5 BASIC

Gene CHD2, Length 3,202 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD2-215ENST00000628375 ITGAEP38570 1179 aa9.62□□□□□ -0.87
CHD2-215ENST00000628375 GRIN2BQ13224 1484 aa9.61□□□□□ -0.87
CHD2-215ENST00000628375 RAPGEF2Q9Y4G8 1499 aa9.61□□□□□ -0.87
CHD2-215ENST00000628375 WDR97A6NE52 1622 aa9.6□□□□□ -0.87
CHD2-215ENST00000628375 ZNF777Q9ULD5 760 aaPredicted RBP9.58□□□□□ -0.88
CHD2-215ENST00000628375 APLP2Q06481 763 aa9.57□□□□□ -0.88
CHD2-215ENST00000628375 EIF4G3O43432 1585 aaKnown RBP9.57□□□□□ -0.88
CHD2-215ENST00000628375 SLC24A1O60721 1099 aa9.57□□□□□ -0.88
CHD2-215ENST00000628375 TRIM26Q12899 539 aaPredicted RBP9.57□□□□□ -0.88
CHD2-215ENST00000628375 ZEB1P37275 1124 aaPredicted RBP9.56□□□□□ -0.88
CHD2-215ENST00000628375 PRG4Q92954 1404 aaPredicted RBP9.55□□□□□ -0.88
CHD2-215ENST00000628375 ABCA10Q8WWZ4 1543 aa9.55□□□□□ -0.88
CHD2-215ENST00000628375 EEA1Q15075 1411 aa9.55□□□□□ -0.88
CHD2-215ENST00000628375 KIF21BO75037 1637 aa9.53□□□□□ -0.88
CHD2-215ENST00000628375 FAM69CQ0P6D2 419 aa9.53□□□□□ -0.88
CHD2-215ENST00000628375 TARBP1Q13395 1621 aaKnown RBP9.53□□□□□ -0.88
CHD2-215ENST00000628375 FHAD1B1AJZ9 1412 aa9.52□□□□□ -0.89
CHD2-215ENST00000628375 FHOD3Q2V2M9 1422 aa9.51□□□□□ -0.89
CHD2-215ENST00000628375 SYNJ2O15056 1496 aa9.5□□□□□ -0.89
CHD2-215ENST00000628375 GRIN2AQ12879 1464 aa9.49□□□□□ -0.89
CHD2-215ENST00000628375 PTPRGP23470 1445 aa9.49□□□□□ -0.89
CHD2-215ENST00000628375 SENP3Q9H4L4 574 aaPredicted RBP9.48□□□□□ -0.89
CHD2-215ENST00000628375 ERCC6L2Q5T890 1561 aa9.48□□□□□ -0.89
CHD2-215ENST00000628375 ABCA5Q8WWZ7 1642 aa9.47□□□□□ -0.89
CHD2-215ENST00000628375 ERICH3Q5RHP9 1530 aa9.45□□□□□ -0.9
CHD2-215ENST00000628375 MLECQ14165 292 aa9.44□□□□□ -0.9
CHD2-215ENST00000628375 PLEKHD1A6NEE1 506 aa9.43□□□□□ -0.9
CHD2-215ENST00000628375 KANK4Q5T7N3 995 aaPredicted RBP9.43□□□□□ -0.9
CHD2-215ENST00000628375 MAGI1Q96QZ7 1491 aaPredicted RBP9.43□□□□□ -0.9
CHD2-215ENST00000628375 FAM50AQ14320 339 aaKnown RBP9.43□□□□□ -0.9
CHD2-215ENST00000628375 CHIC2Q9UKJ5 165 aa9.42□□□□□ -0.9
CHD2-215ENST00000628375 CLIP1P30622 1438 aa9.42□□□□□ -0.9
CHD2-215ENST00000628375 PBRM1Q86U86 1689 aa9.42□□□□□ -0.9
CHD2-215ENST00000628375 CUL7Q14999 1698 aa9.41□□□□□ -0.9
CHD2-215ENST00000628375 CHD1O14646 1710 aa9.41□□□□□ -0.9
CHD2-215ENST00000628375 ACIN1Q9UKV3 1341 aaKnown RBP9.41□□□□□ -0.9
CHD2-215ENST00000628375 PLB1Q6P1J6 1458 aa9.41□□□□□ -0.9
CHD2-215ENST00000628375 PRXQ9BXM0 1461 aa9.41□□□□□ -0.9
CHD2-215ENST00000628375 ARHGEF11O15085 1522 aa9.4□□□□□ -0.9
CHD2-215ENST00000628375 CARMIL2Q6F5E8 1435 aa9.4□□□□□ -0.91
CHD2-215ENST00000628375 GOLGA3Q08378 1498 aa9.39□□□□□ -0.91
CHD2-215ENST00000628375 CEP162Q5TB80 1403 aa9.38□□□□□ -0.91
CHD2-215ENST00000628375 CEP170Q5SW79 1584 aa9.38□□□□□ -0.91
CHD2-215ENST00000628375 RAPGEF3O95398 923 aa9.38□□□□□ -0.91
CHD2-215ENST00000628375 ARID4BQ4LE39 1312 aaPredicted RBP9.36□□□□□ -0.91
CHD2-215ENST00000628375 KIAA0586Q9BVV6 1533 aa9.36□□□□□ -0.91
CHD2-215ENST00000628375 ZNF644Q9H582 1327 aaPredicted RBP9.35□□□□□ -0.91
CHD2-215ENST00000628375 CTTNBP2Q8WZ74 1663 aa9.35□□□□□ -0.91
CHD2-215ENST00000628375 ARAP1Q96P48 1450 aa9.35□□□□□ -0.91
CHD2-215ENST00000628375 NEUROD1Q13562 356 aa9.35□□□□□ -0.91
CHD2-215ENST00000628375 TNIKQ9UKE5 1360 aa9.34□□□□□ -0.91
CHD2-215ENST00000628375 HNRNPMP52272 730 aaKnown RBP eCLIP9.34□□□□□ -0.911e-9■■■■■ 30.2
CHD2-215ENST00000628375 ADAMTS12P58397 1594 aa9.34□□□□□ -0.91
CHD2-215ENST00000628375 CDK11AQ9UQ88 783 aaPredicted RBP9.33□□□□□ -0.92
CHD2-215ENST00000628375 AFAP1Q8N556 730 aa9.32□□□□□ -0.92
CHD2-215ENST00000628375 NUP160Q12769 1436 aa9.32□□□□□ -0.92
CHD2-215ENST00000628375 MTUS2Q5JR59 1369 aa9.31□□□□□ -0.92
CHD2-215ENST00000628375 GRWD1Q9BQ67 446 aaKnown RBP eCLIP9.31□□□□□ -0.922e-11■■□□□ 13
CHD2-215ENST00000628375 CFDP1Q9UEE9 299 aaPredicted RBP9.3□□□□□ -0.92
CHD2-215ENST00000628375 RIMBP3CA6NJZ7 1639 aa9.3□□□□□ -0.92
CHD2-215ENST00000628375 RIMBP3BA6NNM3 1639 aa9.3□□□□□ -0.92
CHD2-215ENST00000628375 RIMBP3Q9UFD9 1639 aa9.3□□□□□ -0.92
CHD2-215ENST00000628375 GTF3C3Q9Y5Q9 886 aa9.29□□□□□ -0.92
CHD2-215ENST00000628375 ARHGAP35Q9NRY4 1499 aa9.28□□□□□ -0.92
CHD2-215ENST00000628375 IQGAP2Q13576 1575 aa9.28□□□□□ -0.92
CHD2-215ENST00000628375 RRP7BPQ9NSQ0 103 aa9.27□□□□□ -0.93
CHD2-215ENST00000628375 UACAQ9BZF9 1416 aa9.27□□□□□ -0.93
CHD2-215ENST00000628375 CDK13Q14004 1512 aaKnown RBP9.26□□□□□ -0.93
CHD2-215ENST00000628375 DISP1Q96F81 1524 aa9.26□□□□□ -0.93
CHD2-215ENST00000628375 CENPBP07199 599 aaPredicted RBP9.26□□□□□ -0.93
CHD2-215ENST00000628375 GGT6Q6P531 493 aa9.25□□□□□ -0.93
CHD2-215ENST00000628375 ASXL2Q76L83 1435 aa9.23□□□□□ -0.93
CHD2-215ENST00000628375 SAMD9Q5K651 1589 aa9.22□□□□□ -0.93
CHD2-215ENST00000628375 ATP10BO94823 1461 aa9.2□□□□□ -0.94
CHD2-215ENST00000628375 AEBP2Q6ZN18 517 aaPredicted RBP9.2□□□□□ -0.94
CHD2-215ENST00000628375 TRIM52Q96A61 297 aa9.2□□□□□ -0.94
CHD2-215ENST00000628375 EFCAB5A4FU69 1503 aa9.2□□□□□ -0.94
CHD2-215ENST00000628375 CEBPAP49715 358 aaPredicted RBP9.19□□□□□ -0.94
CHD2-215ENST00000628375 TSPOAP1O95153 1857 aa9.19□□□□□ -0.94
CHD2-215ENST00000628375 EFCAB2Q5VUJ9 269 aa9.18□□□□□ -0.94
CHD2-215ENST00000628375 CLASP1Q7Z460 1538 aa9.18□□□□□ -0.94
CHD2-215ENST00000628375 FMN1Q68DA7 1419 aa9.17□□□□□ -0.94
CHD2-215ENST00000628375 TSPY4P0CV99 314 aa9.17□□□□□ -0.94
CHD2-215ENST00000628375 TSPY10P0CW01 314 aa9.17□□□□□ -0.94
CHD2-215ENST00000628375 CD109Q6YHK3 1445 aa9.17□□□□□ -0.94
CHD2-215ENST00000628375 CCNB3Q8WWL7 1395 aa9.16□□□□□ -0.94
CHD2-215ENST00000628375 DIEXFQ68CQ4 756 aaKnown RBP9.16□□□□□ -0.94
CHD2-215ENST00000628375 ESF1Q9H501 851 aaKnown RBP9.16□□□□□ -0.94
CHD2-215ENST00000628375 FOXD1Q16676 465 aa9.15□□□□□ -0.94
CHD2-215ENST00000628375 CHGAP10645 457 aaKnown RBP9.15□□□□□ -0.94
CHD2-215ENST00000628375 VPS8Q8N3P4 1428 aa9.15□□□□□ -0.95
CHD2-215ENST00000628375 CFAP43Q8NDM7 1665 aa9.15□□□□□ -0.95
CHD2-215ENST00000628375 NUP153P49790 1475 aaKnown RBP9.15□□□□□ -0.95
CHD2-215ENST00000628375 LRRIQ1Q96JM4 1722 aa9.14□□□□□ -0.95
CHD2-215ENST00000628375 KIF3BO15066 747 aa9.13□□□□□ -0.95
CHD2-215ENST00000628375 KIAA0556O60303 1618 aa9.13□□□□□ -0.95
CHD2-215ENST00000628375 UGGT2Q9NYU1 1516 aa9.13□□□□□ -0.95
CHD2-215ENST00000628375 NUTM2DQ5VT03 806 aaPredicted RBP9.13□□□□□ -0.95
CHD2-215ENST00000628375 SCAPERQ9BY12 1400 aa9.12□□□□□ -0.95
CHD2-215ENST00000628375 EPRSP07814 1512 aaKnown RBP9.11□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 62.4 ms