RNA–Protein interactions for RNA: ENST00000622144.4

PAMR1-209, Transcript of peptidase domain containing associated with muscle regeneration 1, humanhuman

TSL 1 (best) BASIC

Gene PAMR1, Length 2,785 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAMR1-209ENST00000622144 TDRD9Q8NDG6 1382 aaKnown RBP17.25■□□□□ 0.35
PAMR1-209ENST00000622144 PHLDB1Q86UU1 1377 aa17.23■□□□□ 0.35
PAMR1-209ENST00000622144 SIN3AQ96ST3 1273 aa17.23■□□□□ 0.35
PAMR1-209ENST00000622144 RRBP1Q9P2E9 1410 aaKnown RBP17.22■□□□□ 0.35
PAMR1-209ENST00000622144 ARID3CA6NKF2 412 aa17.22■□□□□ 0.35
PAMR1-209ENST00000622144 POLA1P09884 1462 aaPredicted RBP17.21■□□□□ 0.34
PAMR1-209ENST00000622144 RAB3GAP2Q9H2M9 1393 aa17.2■□□□□ 0.34
PAMR1-209ENST00000622144 HIRIP3Q9BW71 556 aaPredicted RBP17.19■□□□□ 0.34
PAMR1-209ENST00000622144 TOPBP1Q92547 1522 aa17.18■□□□□ 0.34
PAMR1-209ENST00000622144 PRDM2Q13029 1718 aa17.17■□□□□ 0.34
PAMR1-209ENST00000622144 TIAM1Q13009 1591 aa17.13■□□□□ 0.33
PAMR1-209ENST00000622144 LRRC9Q6ZRR7 1453 aa17.13■□□□□ 0.33
PAMR1-209ENST00000622144 KCNH8Q96L42 1107 aa17.12■□□□□ 0.33
PAMR1-209ENST00000622144 URB2Q14146 1524 aaKnown RBP17.11■□□□□ 0.33
PAMR1-209ENST00000622144 PCF11O94913 1555 aaKnown RBP17.11■□□□□ 0.33
PAMR1-209ENST00000622144 DNMBPQ6XZF7 1577 aa17.08■□□□□ 0.32
PAMR1-209ENST00000622144 ABCA10Q8WWZ4 1543 aa17.06■□□□□ 0.32
PAMR1-209ENST00000622144 SETD5Q9C0A6 1442 aa17.03■□□□□ 0.32
PAMR1-209ENST00000622144 MAPKBP1O60336 1514 aa17.03■□□□□ 0.32
PAMR1-209ENST00000622144 CLSPNQ9HAW4 1339 aa17.01■□□□□ 0.31
PAMR1-209ENST00000622144 CHIC2Q9UKJ5 165 aa17.01■□□□□ 0.31
PAMR1-209ENST00000622144 FHAD1B1AJZ9 1412 aa17.01■□□□□ 0.31
PAMR1-209ENST00000622144 DDX10Q13206 875 aaKnown RBP16.99■□□□□ 0.31
PAMR1-209ENST00000622144 GAPVD1Q14C86 1478 aa16.97■□□□□ 0.31
PAMR1-209ENST00000622144 MTUS2Q5JR59 1369 aa16.97■□□□□ 0.31
PAMR1-209ENST00000622144 AQRO60306 1485 aaKnown RBP eCLIP16.96■□□□□ 0.31
PAMR1-209ENST00000622144 RRP7BPQ9NSQ0 103 aa16.94■□□□□ 0.3
PAMR1-209ENST00000622144 PTPRKQ15262 1439 aa16.94■□□□□ 0.3
PAMR1-209ENST00000622144 WDR97A6NE52 1622 aa16.93■□□□□ 0.3
PAMR1-209ENST00000622144 CASKIN1Q8WXD9 1431 aa16.92■□□□□ 0.3
PAMR1-209ENST00000622144 KIF21AQ7Z4S6 1674 aa16.91■□□□□ 0.3
PAMR1-209ENST00000622144 PDS5BQ9NTI5 1447 aa16.89■□□□□ 0.29
PAMR1-209ENST00000622144 MAP3K1Q13233 1512 aa16.89■□□□□ 0.29
PAMR1-209ENST00000622144 FYCO1Q9BQS8 1478 aa16.88■□□□□ 0.29
PAMR1-209ENST00000622144 CFAP43Q8NDM7 1665 aa16.88■□□□□ 0.29
PAMR1-209ENST00000622144 SNAPC4Q5SXM2 1469 aa16.88■□□□□ 0.29
PAMR1-209ENST00000622144 FGD6Q6ZV73 1430 aa16.87■□□□□ 0.29
PAMR1-209ENST00000622144 LAMC3Q9Y6N6 1575 aa16.86■□□□□ 0.29
PAMR1-209ENST00000622144 FOXD1Q16676 465 aa16.86■□□□□ 0.29
PAMR1-209ENST00000622144 CTTNBP2Q8WZ74 1663 aa16.85■□□□□ 0.29
PAMR1-209ENST00000622144 FMN1Q68DA7 1419 aa16.85■□□□□ 0.29
PAMR1-209ENST00000622144 CUL7Q14999 1698 aa16.84■□□□□ 0.29
PAMR1-209ENST00000622144 LRRIQ1Q96JM4 1722 aa16.84■□□□□ 0.29
PAMR1-209ENST00000622144 ABCA5Q8WWZ7 1642 aa16.82■□□□□ 0.28
PAMR1-209ENST00000622144 NCOA2Q15596 1464 aa16.82■□□□□ 0.28
PAMR1-209ENST00000622144 PPP1R15AO75807 674 aaPredicted RBP16.82■□□□□ 0.28
PAMR1-209ENST00000622144 TRIM52Q96A61 297 aa16.82■□□□□ 0.28
PAMR1-209ENST00000622144 EFCAB5A4FU69 1503 aa16.81■□□□□ 0.28
PAMR1-209ENST00000622144 FBLN2P98095 1184 aa16.81■□□□□ 0.28
PAMR1-209ENST00000622144 MAGI3Q5TCQ9 1506 aa16.81■□□□□ 0.28
PAMR1-209ENST00000622144 ZNF608Q9ULD9 1512 aaPredicted RBP16.81■□□□□ 0.28
PAMR1-209ENST00000622144 CCDC18Q5T9S5 1454 aa16.78■□□□□ 0.28
PAMR1-209ENST00000622144 CDK13Q14004 1512 aaKnown RBP16.78■□□□□ 0.28
PAMR1-209ENST00000622144 ZNF644Q9H582 1327 aaPredicted RBP16.77■□□□□ 0.28
PAMR1-209ENST00000622144 GRIN2BQ13224 1484 aa16.77■□□□□ 0.27
PAMR1-209ENST00000622144 BCANQ96GW7 911 aa16.77■□□□□ 0.27
PAMR1-209ENST00000622144 TARBP1Q13395 1621 aaKnown RBP16.75■□□□□ 0.27
PAMR1-209ENST00000622144 TONSLQ96HA7 1378 aa16.74■□□□□ 0.27
PAMR1-209ENST00000622144 MYOM3Q5VTT5 1437 aa16.74■□□□□ 0.27
PAMR1-209ENST00000622144 SAMD9Q5K651 1589 aa16.73■□□□□ 0.27
PAMR1-209ENST00000622144 SUPT16HQ9Y5B9 1047 aaKnown RBP16.73■□□□□ 0.27
PAMR1-209ENST00000622144 NAIPQ13075 1403 aa16.73■□□□□ 0.27
PAMR1-209ENST00000622144 CNGB1Q14028 1251 aaPredicted RBP16.68■□□□□ 0.26
PAMR1-209ENST00000622144 HFM1A2PYH4 1435 aa16.67■□□□□ 0.26
PAMR1-209ENST00000622144 ZNF777Q9ULD5 760 aaPredicted RBP16.67■□□□□ 0.26
PAMR1-209ENST00000622144 KDM6BO15054 1643 aa16.67■□□□□ 0.26
PAMR1-209ENST00000622144 PTPN23Q9H3S7 1636 aa16.67■□□□□ 0.26
PAMR1-209ENST00000622144 EPRSP07814 1512 aaKnown RBP16.64■□□□□ 0.26
PAMR1-209ENST00000622144 UACAQ9BZF9 1416 aa16.64■□□□□ 0.25
PAMR1-209ENST00000622144 THOC2Q8NI27 1593 aaKnown RBP16.64■□□□□ 0.25
PAMR1-209ENST00000622144 PBRM1Q86U86 1689 aa16.63■□□□□ 0.25
PAMR1-209ENST00000622144 MRC2Q9UBG0 1479 aa16.63■□□□□ 0.25
PAMR1-209ENST00000622144 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP16.63■□□□□ 0.25
PAMR1-209ENST00000622144 IQGAP2Q13576 1575 aa16.63■□□□□ 0.25
PAMR1-209ENST00000622144 UGGT2Q9NYU1 1516 aa16.62■□□□□ 0.25
PAMR1-209ENST00000622144 SUPT6HQ7KZ85 1726 aaKnown RBP16.62■□□□□ 0.25
PAMR1-209ENST00000622144 MPHOSPH9Q99550 1183 aa16.61■□□□□ 0.25
PAMR1-209ENST00000622144 CHMP7Q8WUX9 453 aaPredicted RBP16.61■□□□□ 0.25
PAMR1-209ENST00000622144 EHBP1L1Q8N3D4 1523 aa16.6■□□□□ 0.25
PAMR1-209ENST00000622144 DENND4BO75064 1496 aaPredicted RBP16.6■□□□□ 0.25
PAMR1-209ENST00000622144 ADAMTS12P58397 1594 aa16.6■□□□□ 0.25
PAMR1-209ENST00000622144 ANP32CO43423 234 aa16.59■□□□□ 0.25
PAMR1-209ENST00000622144 HSPA5P11021 654 aaKnown RBP16.59■□□□□ 0.25
PAMR1-209ENST00000622144 L3MBTL2Q969R5 705 aa16.59■□□□□ 0.25
PAMR1-209ENST00000622144 FKBP8Q14318 412 aa16.57■□□□□ 0.24
PAMR1-209ENST00000622144 C11orf95C9JLR9 678 aaPredicted RBP16.56■□□□□ 0.24
PAMR1-209ENST00000622144 SENP3-EIF4A1A0A087X0R7 540 aa16.56■□□□□ 0.24
PAMR1-209ENST00000622144 PRG4Q92954 1404 aaPredicted RBP16.56■□□□□ 0.24
PAMR1-209ENST00000622144 TIMELESSQ9UNS1 1208 aa16.55■□□□□ 0.24
PAMR1-209ENST00000622144 ERCC6Q03468 1493 aa16.55■□□□□ 0.24
PAMR1-209ENST00000622144 ZNF326Q5BKZ1 582 aaKnown RBP16.55■□□□□ 0.24
PAMR1-209ENST00000622144 BCL11AQ9H165 835 aa16.55■□□□□ 0.24
PAMR1-209ENST00000622144 CCDC184Q52MB2 194 aa16.54■□□□□ 0.24
PAMR1-209ENST00000622144 DISP1Q96F81 1524 aa16.54■□□□□ 0.24
PAMR1-209ENST00000622144 ARHGEF11O15085 1522 aa16.53■□□□□ 0.24
PAMR1-209ENST00000622144 NBPF8Q3BBV2 869 aa16.53■□□□□ 0.24
PAMR1-209ENST00000622144 WASHC2AQ641Q2 1341 aa16.53■□□□□ 0.24
PAMR1-209ENST00000622144 PLB1Q6P1J6 1458 aa16.53■□□□□ 0.24
PAMR1-209ENST00000622144 WDR62O43379 1518 aa16.53■□□□□ 0.24
PAMR1-209ENST00000622144 HECW1Q76N89 1606 aa16.53■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 11.5 ms