RNA–Protein interactions for RNA: ENST00000621098.1

NR2E3-203, Transcript of nuclear receptor subfamily 2 group E member 3, humanhuman

TSL 1 (best) BASIC

Gene NR2E3, Length 2,064 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR2E3-203ENST00000621098 CCNB3Q8WWL7 1395 aa22.72■■□□□ 1.23
NR2E3-203ENST00000621098 TOPBP1Q92547 1522 aa22.72■■□□□ 1.23
NR2E3-203ENST00000621098 DNMBPQ6XZF7 1577 aa22.7■■□□□ 1.22
NR2E3-203ENST00000621098 MAP3K1Q13233 1512 aa22.7■■□□□ 1.22
NR2E3-203ENST00000621098 WDR62O43379 1518 aa22.67■■□□□ 1.22
NR2E3-203ENST00000621098 FGD5Q6ZNL6 1462 aa22.67■■□□□ 1.22
NR2E3-203ENST00000621098 TIAM1Q13009 1591 aa22.63■■□□□ 1.21
NR2E3-203ENST00000621098 SUPT16HQ9Y5B9 1047 aaKnown RBP22.61■■□□□ 1.21
NR2E3-203ENST00000621098 IGF1RP08069 1367 aa22.61■■□□□ 1.21
NR2E3-203ENST00000621098 MAPKBP1O60336 1514 aa22.6■■□□□ 1.21
NR2E3-203ENST00000621098 POLA1P09884 1462 aaPredicted RBP22.57■■□□□ 1.2
NR2E3-203ENST00000621098 RAD54L2Q9Y4B4 1467 aa22.54■■□□□ 1.2
NR2E3-203ENST00000621098 CFAP43Q8NDM7 1665 aa22.53■■□□□ 1.2
NR2E3-203ENST00000621098 RAB3GAP2Q9H2M9 1393 aa22.53■■□□□ 1.2
NR2E3-203ENST00000621098 CARMIL1Q5VZK9 1371 aa22.52■■□□□ 1.2
NR2E3-203ENST00000621098 LRRC9Q6ZRR7 1453 aa22.48■■□□□ 1.19
NR2E3-203ENST00000621098 SETD5Q9C0A6 1442 aa22.47■■□□□ 1.19
NR2E3-203ENST00000621098 TARBP1Q13395 1621 aaKnown RBP22.44■■□□□ 1.18
NR2E3-203ENST00000621098 ABCA10Q8WWZ4 1543 aa22.44■■□□□ 1.18
NR2E3-203ENST00000621098 FHAD1B1AJZ9 1412 aa22.41■■□□□ 1.18
NR2E3-203ENST00000621098 WDR97A6NE52 1622 aa22.39■■□□□ 1.17
NR2E3-203ENST00000621098 IFT140Q96RY7 1462 aa22.39■■□□□ 1.17
NR2E3-203ENST00000621098 PCF11O94913 1555 aaKnown RBP22.38■■□□□ 1.17
NR2E3-203ENST00000621098 ITGAEP38570 1179 aa22.37■■□□□ 1.17
NR2E3-203ENST00000621098 PHLDB1Q86UU1 1377 aa22.36■■□□□ 1.17
NR2E3-203ENST00000621098 ZNF608Q9ULD9 1512 aaPredicted RBP22.36■■□□□ 1.17
NR2E3-203ENST00000621098 TDRD9Q8NDG6 1382 aaKnown RBP22.36■■□□□ 1.17
NR2E3-203ENST00000621098 TIMELESSQ9UNS1 1208 aa22.35■■□□□ 1.17
NR2E3-203ENST00000621098 TSHZ2Q9NRE2 1034 aa22.34■■□□□ 1.17
NR2E3-203ENST00000621098 AQRO60306 1485 aaKnown RBP eCLIP22.31■■□□□ 1.16
NR2E3-203ENST00000621098 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP22.31■■□□□ 1.16
NR2E3-203ENST00000621098 CUL7Q14999 1698 aa22.3■■□□□ 1.16
NR2E3-203ENST00000621098 EFCAB5A4FU69 1503 aa22.29■■□□□ 1.16
NR2E3-203ENST00000621098 FYCO1Q9BQS8 1478 aa22.29■■□□□ 1.16
NR2E3-203ENST00000621098 KCNH8Q96L42 1107 aa22.25■■□□□ 1.15
NR2E3-203ENST00000621098 ABCA5Q8WWZ7 1642 aa22.24■■□□□ 1.15
NR2E3-203ENST00000621098 GAPVD1Q14C86 1478 aa22.23■■□□□ 1.15
NR2E3-203ENST00000621098 CTTNBP2Q8WZ74 1663 aa22.23■■□□□ 1.15
NR2E3-203ENST00000621098 PPP1R15AO75807 674 aaPredicted RBP22.22■■□□□ 1.15
NR2E3-203ENST00000621098 EIF4G3O43432 1585 aaKnown RBP22.22■■□□□ 1.15
NR2E3-203ENST00000621098 CASKIN1Q8WXD9 1431 aa22.21■■□□□ 1.15
NR2E3-203ENST00000621098 CCER2I3L3R5 266 aa22.18■■□□□ 1.14
NR2E3-203ENST00000621098 FAM50AQ14320 339 aaKnown RBP22.18■■□□□ 1.14
NR2E3-203ENST00000621098 SIN3AQ96ST3 1273 aa22.18■■□□□ 1.14
NR2E3-203ENST00000621098 DDX10Q13206 875 aaKnown RBP22.18■■□□□ 1.14
NR2E3-203ENST00000621098 P3H3Q8IVL6 736 aa22.16■■□□□ 1.14
NR2E3-203ENST00000621098 PBRM1Q86U86 1689 aa22.16■■□□□ 1.14
NR2E3-203ENST00000621098 FHOD3Q2V2M9 1422 aa22.13■■□□□ 1.13
NR2E3-203ENST00000621098 ANP32EQ9BTT0 268 aa22.11■■□□□ 1.13
NR2E3-203ENST00000621098 GRIN2BQ13224 1484 aa22.11■■□□□ 1.13
NR2E3-203ENST00000621098 FGD6Q6ZV73 1430 aa22.1■■□□□ 1.13
NR2E3-203ENST00000621098 FKBP8Q14318 412 aa22.08■■□□□ 1.12
NR2E3-203ENST00000621098 CCDC18Q5T9S5 1454 aa22.07■■□□□ 1.12
NR2E3-203ENST00000621098 PTPN23Q9H3S7 1636 aa22.07■■□□□ 1.12
NR2E3-203ENST00000621098 FMN1Q68DA7 1419 aa22.07■■□□□ 1.12
NR2E3-203ENST00000621098 SNAPC4Q5SXM2 1469 aa22.06■■□□□ 1.12
NR2E3-203ENST00000621098 HFM1A2PYH4 1435 aa22.06■■□□□ 1.12
NR2E3-203ENST00000621098 ANP32CO43423 234 aa22.05■■□□□ 1.12
NR2E3-203ENST00000621098 ATP1B4Q9UN42 357 aaPredicted RBP22.05■■□□□ 1.12
NR2E3-203ENST00000621098 UACAQ9BZF9 1416 aa22.05■■□□□ 1.12
NR2E3-203ENST00000621098 NEFLP07196 543 aa22.03■■□□□ 1.12
NR2E3-203ENST00000621098 LRRIQ1Q96JM4 1722 aa22.02■■□□□ 1.12
NR2E3-203ENST00000621098 SAMD9Q5K651 1589 aa22.02■■□□□ 1.12
NR2E3-203ENST00000621098 TONSLQ96HA7 1378 aa22.02■■□□□ 1.11
NR2E3-203ENST00000621098 BCANQ96GW7 911 aa22■■□□□ 1.11
NR2E3-203ENST00000621098 SUPT6HQ7KZ85 1726 aaKnown RBP21.97■■□□□ 1.11
NR2E3-203ENST00000621098 ADAMTS12P58397 1594 aa21.97■■□□□ 1.11
NR2E3-203ENST00000621098 MAGI1Q96QZ7 1491 aaPredicted RBP21.97■■□□□ 1.11
NR2E3-203ENST00000621098 KDM5BQ9UGL1 1544 aa21.96■■□□□ 1.11
NR2E3-203ENST00000621098 FBLN2P98095 1184 aa21.95■■□□□ 1.11
NR2E3-203ENST00000621098 PTPRKQ15262 1439 aa21.94■■□□□ 1.1
NR2E3-203ENST00000621098 EHBP1L1Q8N3D4 1523 aa21.94■■□□□ 1.1
NR2E3-203ENST00000621098 NAIPQ13075 1403 aa21.93■■□□□ 1.1
NR2E3-203ENST00000621098 MYOM3Q5VTT5 1437 aa21.93■■□□□ 1.1
NR2E3-203ENST00000621098 MTUS2Q5JR59 1369 aa21.92■■□□□ 1.1
NR2E3-203ENST00000621098 GCC2Q8IWJ2 1684 aa21.92■■□□□ 1.1
NR2E3-203ENST00000621098 CHMP7Q8WUX9 453 aaPredicted RBP21.92■■□□□ 1.1
NR2E3-203ENST00000621098 SYNJ2O15056 1496 aa21.91■■□□□ 1.1
NR2E3-203ENST00000621098 NCOA2Q15596 1464 aa21.91■■□□□ 1.1
NR2E3-203ENST00000621098 HIRIP3Q9BW71 556 aaPredicted RBP21.91■■□□□ 1.1
NR2E3-203ENST00000621098 HECW1Q76N89 1606 aa21.9■■□□□ 1.1
NR2E3-203ENST00000621098 CHD1O14646 1710 aa21.9■■□□□ 1.1
NR2E3-203ENST00000621098 TRIM52Q96A61 297 aa21.89■■□□□ 1.1
NR2E3-203ENST00000621098 ARHGEF11O15085 1522 aa21.88■■□□□ 1.09
NR2E3-203ENST00000621098 UGGT2Q9NYU1 1516 aa21.87■■□□□ 1.09
NR2E3-203ENST00000621098 RBM19Q9Y4C8 960 aaKnown RBP21.86■■□□□ 1.09
NR2E3-203ENST00000621098 GRIN2AQ12879 1464 aa21.85■■□□□ 1.09
NR2E3-203ENST00000621098 AKNAQ7Z591 1439 aa21.83■■□□□ 1.08
NR2E3-203ENST00000621098 TCOF1Q13428 1488 aaKnown RBP21.82■■□□□ 1.08
NR2E3-203ENST00000621098 IQGAP2Q13576 1575 aa21.8■■□□□ 1.08
NR2E3-203ENST00000621098 CEP170Q5SW79 1584 aa21.76■■□□□ 1.07
NR2E3-203ENST00000621098 MAGI3Q5TCQ9 1506 aa21.75■■□□□ 1.07
NR2E3-203ENST00000621098 DENND4BO75064 1496 aaPredicted RBP21.74■■□□□ 1.07
NR2E3-203ENST00000621098 NUP160Q12769 1436 aa21.72■■□□□ 1.07
NR2E3-203ENST00000621098 CNTLNQ9NXG0 1405 aa21.71■■□□□ 1.07
NR2E3-203ENST00000621098 POLR1AO95602 1720 aaPredicted RBP21.7■■□□□ 1.07
NR2E3-203ENST00000621098 ERICH6BQ5W0A0 696 aa21.7■■□□□ 1.06
NR2E3-203ENST00000621098 WASHC2AQ641Q2 1341 aa21.69■■□□□ 1.06
NR2E3-203ENST00000621098 HNRNPUQ00839 825 aaKnown RBP eCLIP21.69■■□□□ 1.06
NR2E3-203ENST00000621098 OSCARQ8IYS5 282 aa21.69■■□□□ 1.06
Retrieved 100 of 20,778 RNA–protein pairs in 48.5 ms