RNA–Protein interactions for RNA: ENST00000620916.2

MATR3-228, Transcript of matrin 3, humanhuman

TSL 5 BASIC

Gene MATR3, Length 3,134 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MATR3-228ENST00000620916 GTF3C3Q9Y5Q9 886 aa7.72□□□□□ -1.17
MATR3-228ENST00000620916 PLEKHG5O94827 1062 aa7.7□□□□□ -1.18
MATR3-228ENST00000620916 NEUROD1Q13562 356 aa7.7□□□□□ -1.18
MATR3-228ENST00000620916 PODXL2Q9NZ53 605 aa7.68□□□□□ -1.18
MATR3-228ENST00000620916 ARAP1Q96P48 1450 aa7.67□□□□□ -1.18
MATR3-228ENST00000620916 MSH5O43196 834 aa7.66□□□□□ -1.18
MATR3-228ENST00000620916 TOP2AP11388 1531 aaKnown RBP7.65□□□□□ -1.19
MATR3-228ENST00000620916 MYCNP04198 464 aaPredicted RBP7.65□□□□□ -1.19
MATR3-228ENST00000620916 TRHP20396 242 aaPredicted RBP7.65□□□□□ -1.19
MATR3-228ENST00000620916 RANGAP1P46060 587 aaPredicted RBP7.65□□□□□ -1.19
MATR3-228ENST00000620916 ERICH6BQ5W0A0 696 aa7.65□□□□□ -1.19
MATR3-228ENST00000620916 EIF4G3O43432 1585 aaKnown RBP7.64□□□□□ -1.19
MATR3-228ENST00000620916 HOXD11P31277 338 aaPredicted RBP7.64□□□□□ -1.19
MATR3-228ENST00000620916 CYB5RLQ6IPT4 315 aa7.64□□□□□ -1.19
MATR3-228ENST00000620916 WIZO95785 1651 aa7.63□□□□□ -1.19
MATR3-228ENST00000620916 PKNOX2Q96KN3 472 aa7.63□□□□□ -1.19
MATR3-228ENST00000620916 TOPBP1Q92547 1522 aa7.62□□□□□ -1.19
MATR3-228ENST00000620916 DNMBPQ6XZF7 1577 aa7.62□□□□□ -1.19
MATR3-228ENST00000620916 ANO8Q9HCE9 1232 aaPredicted RBP7.62□□□□□ -1.19
MATR3-228ENST00000620916 ZNF608Q9ULD9 1512 aaPredicted RBP7.62□□□□□ -1.19
MATR3-228ENST00000620916 CHD1O14646 1710 aa7.61□□□□□ -1.19
MATR3-228ENST00000620916 CLASP1Q7Z460 1538 aa7.61□□□□□ -1.19
MATR3-228ENST00000620916 MYT1LQ9UL68 1186 aa7.61□□□□□ -1.19
MATR3-228ENST00000620916 DMRT2Q9Y5R5 561 aa7.6□□□□□ -1.19
MATR3-228ENST00000620916 SYNJ1O43426 1573 aa7.6□□□□□ -1.19
MATR3-228ENST00000620916 TARBP1Q13395 1621 aaKnown RBP7.6□□□□□ -1.19
MATR3-228ENST00000620916 CLSPNQ9HAW4 1339 aa7.58□□□□□ -1.2
MATR3-228ENST00000620916 PCGF6Q9BYE7 350 aa7.57□□□□□ -1.2
MATR3-228ENST00000620916 MAGI1Q96QZ7 1491 aaPredicted RBP7.57□□□□□ -1.2
MATR3-228ENST00000620916 BIVM-ERCC5R4GMW8 1640 aa7.56□□□□□ -1.2
MATR3-228ENST00000620916 ATXN8OSP0DMR3 200 aa7.55□□□□□ -1.2
MATR3-228ENST00000620916 NEFLP07196 543 aa7.53□□□□□ -1.2
MATR3-228ENST00000620916 PLCB2Q00722 1185 aa7.53□□□□□ -1.2
MATR3-228ENST00000620916 SYNJ2O15056 1496 aa7.51□□□□□ -1.21
MATR3-228ENST00000620916 DCAF8L1A6NGE4 600 aa7.51□□□□□ -1.21
MATR3-228ENST00000620916 HAP1P54257 671 aaPredicted RBP7.51□□□□□ -1.21
MATR3-228ENST00000620916 AQRO60306 1485 aaKnown RBP eCLIP7.51□□□□□ -1.214e-7■■■■□ 24.2
MATR3-228ENST00000620916 POLA1P09884 1462 aaPredicted RBP7.5□□□□□ -1.21
MATR3-228ENST00000620916 GRIN2BQ13224 1484 aa7.5□□□□□ -1.21
MATR3-228ENST00000620916 GAPVD1Q14C86 1478 aa7.5□□□□□ -1.21
MATR3-228ENST00000620916 CCDC88BA6NC98 1476 aa7.49□□□□□ -1.21
MATR3-228ENST00000620916 KLHL34Q8N239 644 aa7.48□□□□□ -1.21
MATR3-228ENST00000620916 SNAPC4Q5SXM2 1469 aa7.48□□□□□ -1.21
MATR3-228ENST00000620916 SOGA1O94964 1423 aa7.47□□□□□ -1.21
MATR3-228ENST00000620916 PDIA4P13667 645 aaKnown RBP7.46□□□□□ -1.21
MATR3-228ENST00000620916 CHMP7Q8WUX9 453 aaPredicted RBP7.46□□□□□ -1.21
MATR3-228ENST00000620916 FBLN2P98095 1184 aa7.45□□□□□ -1.22
MATR3-228ENST00000620916 TSHZ2Q9NRE2 1034 aa7.44□□□□□ -1.22
MATR3-228ENST00000620916 SALL2Q9Y467 1007 aaPredicted RBP7.44□□□□□ -1.22
MATR3-228ENST00000620916 SHROOM2Q13796 1616 aa7.42□□□□□ -1.22
MATR3-228ENST00000620916 PDE4CQ08493 712 aa7.42□□□□□ -1.22
MATR3-228ENST00000620916 HOMEZQ8IX15 550 aa7.41□□□□□ -1.22
MATR3-228ENST00000620916 TIMELESSQ9UNS1 1208 aa7.41□□□□□ -1.22
MATR3-228ENST00000620916 PBRM1Q86U86 1689 aa7.4□□□□□ -1.22
MATR3-228ENST00000620916 TDRD9Q8NDG6 1382 aaKnown RBP7.4□□□□□ -1.22
MATR3-228ENST00000620916 KIF13AQ9H1H9 1805 aa7.4□□□□□ -1.22
MATR3-228ENST00000620916 NUP160Q12769 1436 aa7.4□□□□□ -1.22
MATR3-228ENST00000620916 MAPKBP1O60336 1514 aa7.4□□□□□ -1.23
MATR3-228ENST00000620916 U3KPZ7 1027 aaPredicted RBP7.4□□□□□ -1.23
MATR3-228ENST00000620916 FGD5Q6ZNL6 1462 aa7.4□□□□□ -1.23
MATR3-228ENST00000620916 RAD54L2Q9Y4B4 1467 aa7.4□□□□□ -1.23
MATR3-228ENST00000620916 GRWD1Q9BQ67 446 aaKnown RBP eCLIP7.39□□□□□ -1.233e-7■■■□□ 18.1
MATR3-228ENST00000620916 IFNLR1Q8IU57 520 aaPredicted RBP7.39□□□□□ -1.23
MATR3-228ENST00000620916 ABCA10Q8WWZ4 1543 aa7.39□□□□□ -1.23
MATR3-228ENST00000620916 ABCC10Q5T3U5 1492 aa7.39□□□□□ -1.23
MATR3-228ENST00000620916 ABCA5Q8WWZ7 1642 aa7.38□□□□□ -1.23
MATR3-228ENST00000620916 TRIM26Q12899 539 aaPredicted RBP7.38□□□□□ -1.23
MATR3-228ENST00000620916 TAOK2Q9UL54 1235 aa7.38□□□□□ -1.23
MATR3-228ENST00000620916 ERCC6L2Q5T890 1561 aa7.38□□□□□ -1.23
MATR3-228ENST00000620916 ILDR1Q86SU0 546 aaPredicted RBP7.38□□□□□ -1.23
MATR3-228ENST00000620916 CEP170Q5SW79 1584 aa7.38□□□□□ -1.23
MATR3-228ENST00000620916 FGD1P98174 961 aa7.37□□□□□ -1.23
MATR3-228ENST00000620916 GRIN2AQ12879 1464 aa7.37□□□□□ -1.23
MATR3-228ENST00000620916 TAF7LQ5H9L4 462 aa7.35□□□□□ -1.23
MATR3-228ENST00000620916 KDM2AQ9Y2K7 1162 aa7.35□□□□□ -1.23
MATR3-228ENST00000620916 PKD2Q13563 968 aa7.34□□□□□ -1.23
MATR3-228ENST00000620916 SPDYE4A6NLX3 237 aa7.34□□□□□ -1.23
MATR3-228ENST00000620916 MKRN4PQ13434 485 aaPredicted RBP7.34□□□□□ -1.23
MATR3-228ENST00000620916 TPRNQ4KMQ1 711 aa7.34□□□□□ -1.23
MATR3-228ENST00000620916 CUX1P39880 1505 aa7.34□□□□□ -1.23
MATR3-228ENST00000620916 ADAMTS12P58397 1594 aa7.34□□□□□ -1.24
MATR3-228ENST00000620916 KDM6BO15054 1643 aa7.33□□□□□ -1.24
MATR3-228ENST00000620916 FHAD1B1AJZ9 1412 aa7.33□□□□□ -1.24
MATR3-228ENST00000620916 VASPP50552 380 aaPredicted RBP7.33□□□□□ -1.24
MATR3-228ENST00000620916 DIP2BQ9P265 1576 aa7.33□□□□□ -1.24
MATR3-228ENST00000620916 TOP2BQ02880 1626 aa7.32□□□□□ -1.24
MATR3-228ENST00000620916 ERICH3Q5RHP9 1530 aa7.32□□□□□ -1.24
MATR3-228ENST00000620916 KDM4FA0A1W2PPD8 638 aa7.32□□□□□ -1.24
MATR3-228ENST00000620916 NPM1P06748 294 aaKnown RBP eCLIP7.32□□□□□ -1.24
MATR3-228ENST00000620916 KIF21BO75037 1637 aa7.31□□□□□ -1.24
MATR3-228ENST00000620916 GLIPR1L2Q4G1C9 344 aa7.31□□□□□ -1.24
MATR3-228ENST00000620916 ZNF219Q9P2Y4 722 aaPredicted RBP7.31□□□□□ -1.24
MATR3-228ENST00000620916 BCANQ96GW7 911 aa7.3□□□□□ -1.24
MATR3-228ENST00000620916 EEA1Q15075 1411 aa7.3□□□□□ -1.24
MATR3-228ENST00000620916 GLI2P10070 1586 aa7.29□□□□□ -1.24
MATR3-228ENST00000620916 CCDC136Q96JN2 1154 aa7.29□□□□□ -1.24
MATR3-228ENST00000620916 AAMPQ13685 434 aa7.29□□□□□ -1.24
MATR3-228ENST00000620916 DEKP35659 375 aaKnown RBP7.28□□□□□ -1.24
MATR3-228ENST00000620916 FAM69CQ0P6D2 419 aa7.28□□□□□ -1.24
MATR3-228ENST00000620916 WRNQ14191 1432 aaPredicted RBP eCLIP7.27□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms