RNA–Protein interactions for RNA: ENST00000619874.4

SMIM11B-202, Transcript of small integral membrane protein 11B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMIM11B, Length 843 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM11B-202ENST00000619874 RUSC2Q8N2Y8 1516 aa22.18■■□□□ 1.14
SMIM11B-202ENST00000619874 KIF21BO75037 1637 aa22.17■■□□□ 1.14
SMIM11B-202ENST00000619874 MRC2Q9UBG0 1479 aa22.15■■□□□ 1.14
SMIM11B-202ENST00000619874 POLA1P09884 1462 aaPredicted RBP22.14■■□□□ 1.13
SMIM11B-202ENST00000619874 GOLGA3Q08378 1498 aa22.14■■□□□ 1.13
SMIM11B-202ENST00000619874 ABCA10Q8WWZ4 1543 aa22.1■■□□□ 1.13
SMIM11B-202ENST00000619874 CUX2O14529 1486 aa22.09■■□□□ 1.13
SMIM11B-202ENST00000619874 ZBTB22O15209 634 aa22.09■■□□□ 1.13
SMIM11B-202ENST00000619874 ATF5Q9Y2D1 282 aaPredicted RBP22.07■■□□□ 1.12
SMIM11B-202ENST00000619874 ERCC6Q03468 1493 aa22.07■■□□□ 1.12
SMIM11B-202ENST00000619874 ERICH3Q5RHP9 1530 aa22.06■■□□□ 1.12
SMIM11B-202ENST00000619874 WDR62O43379 1518 aa22.05■■□□□ 1.12
SMIM11B-202ENST00000619874 WDR97A6NE52 1622 aa22.03■■□□□ 1.12
SMIM11B-202ENST00000619874 POLA2Q14181 598 aa22.03■■□□□ 1.12
SMIM11B-202ENST00000619874 TNIKQ9UKE5 1360 aa22.02■■□□□ 1.12
SMIM11B-202ENST00000619874 PRXQ9BXM0 1461 aa22.01■■□□□ 1.11
SMIM11B-202ENST00000619874 RAD54L2Q9Y4B4 1467 aa21.98■■□□□ 1.11
SMIM11B-202ENST00000619874 THOC2Q8NI27 1593 aaKnown RBP21.95■■□□□ 1.11
SMIM11B-202ENST00000619874 TARBP1Q13395 1621 aaKnown RBP21.92■■□□□ 1.1
SMIM11B-202ENST00000619874 ABCA5Q8WWZ7 1642 aa21.91■■□□□ 1.1
SMIM11B-202ENST00000619874 RAPGEF2Q9Y4G8 1499 aa21.91■■□□□ 1.1
SMIM11B-202ENST00000619874 UBTFP17480 764 aaKnown RBP21.91■■□□□ 1.1
SMIM11B-202ENST00000619874 IFT140Q96RY7 1462 aa21.9■■□□□ 1.1
SMIM11B-202ENST00000619874 IGF1RP08069 1367 aa21.9■■□□□ 1.1
SMIM11B-202ENST00000619874 EHMT2Q96KQ7 1210 aa21.9■■□□□ 1.1
SMIM11B-202ENST00000619874 CUL7Q14999 1698 aa21.9■■□□□ 1.1
SMIM11B-202ENST00000619874 CEP162Q5TB80 1403 aa21.87■■□□□ 1.09
SMIM11B-202ENST00000619874 POTEHQ6S545 545 aa21.85■■□□□ 1.09
SMIM11B-202ENST00000619874 GAPVD1Q14C86 1478 aa21.84■■□□□ 1.09
SMIM11B-202ENST00000619874 CARMIL1Q5VZK9 1371 aa21.84■■□□□ 1.09
SMIM11B-202ENST00000619874 TDRD9Q8NDG6 1382 aaKnown RBP21.76■■□□□ 1.07
SMIM11B-202ENST00000619874 PBRM1Q86U86 1689 aa21.75■■□□□ 1.07
SMIM11B-202ENST00000619874 CLIP1P30622 1438 aa21.72■■□□□ 1.07
SMIM11B-202ENST00000619874 GRIN2BQ13224 1484 aa21.71■■□□□ 1.07
SMIM11B-202ENST00000619874 RBM42Q9BTD8 480 aaKnown RBP21.71■■□□□ 1.07
SMIM11B-202ENST00000619874 EIF4G3O43432 1585 aaKnown RBP21.65■■□□□ 1.06
SMIM11B-202ENST00000619874 FHAD1B1AJZ9 1412 aa21.65■■□□□ 1.06
SMIM11B-202ENST00000619874 ADAMTS12P58397 1594 aa21.65■■□□□ 1.06
SMIM11B-202ENST00000619874 AQRO60306 1485 aaKnown RBP eCLIP21.63■■□□□ 1.05
SMIM11B-202ENST00000619874 ZNF608Q9ULD9 1512 aaPredicted RBP21.62■■□□□ 1.05
SMIM11B-202ENST00000619874 CTTNBP2Q8WZ74 1663 aa21.61■■□□□ 1.05
SMIM11B-202ENST00000619874 MAGI1Q96QZ7 1491 aaPredicted RBP21.58■■□□□ 1.04
SMIM11B-202ENST00000619874 VPS8Q8N3P4 1428 aa21.55■■□□□ 1.04
SMIM11B-202ENST00000619874 ATXN8OSP0DMR3 200 aa21.55■■□□□ 1.04
SMIM11B-202ENST00000619874 EFCAB5A4FU69 1503 aa21.53■■□□□ 1.04
SMIM11B-202ENST00000619874 SNAPC4Q5SXM2 1469 aa21.52■■□□□ 1.04
SMIM11B-202ENST00000619874 ARHGAP35Q9NRY4 1499 aa21.48■■□□□ 1.03
SMIM11B-202ENST00000619874 ZBTB12Q9Y330 459 aaPredicted RBP21.48■■□□□ 1.03
SMIM11B-202ENST00000619874 ARAP1Q96P48 1450 aa21.47■■□□□ 1.03
SMIM11B-202ENST00000619874 SYNJ2O15056 1496 aa21.45■■□□□ 1.02
SMIM11B-202ENST00000619874 GRIN2AQ12879 1464 aa21.43■■□□□ 1.02
SMIM11B-202ENST00000619874 RANGAP1P46060 587 aaPredicted RBP21.4■■□□□ 1.02
SMIM11B-202ENST00000619874 IQGAP2Q13576 1575 aa21.4■■□□□ 1.02
SMIM11B-202ENST00000619874 TRIM26Q12899 539 aaPredicted RBP21.38■■□□□ 1.01
SMIM11B-202ENST00000619874 SAMD9Q5K651 1589 aa21.36■■□□□ 1.01
SMIM11B-202ENST00000619874 OSCARQ8IYS5 282 aa21.35■■□□□ 1.01
SMIM11B-202ENST00000619874 KIAA0586Q9BVV6 1533 aa21.34■■□□□ 1.01
SMIM11B-202ENST00000619874 CHRDL2Q6WN34 429 aa21.32■■□□□ 1
SMIM11B-202ENST00000619874 CHMP7Q8WUX9 453 aaPredicted RBP21.32■■□□□ 1
SMIM11B-202ENST00000619874 UGGT2Q9NYU1 1516 aa21.3■■□□□ 1
SMIM11B-202ENST00000619874 AKT1S1Q96B36 256 aa21.3■■□□□ 1
SMIM11B-202ENST00000619874 FMN1Q68DA7 1419 aa21.29■■□□□ 1
SMIM11B-202ENST00000619874 NUP160Q12769 1436 aa21.29■■□□□ 1
SMIM11B-202ENST00000619874 MAP3K1Q13233 1512 aa21.26■□□□□ 0.99
SMIM11B-202ENST00000619874 FHOD3Q2V2M9 1422 aa21.25■□□□□ 0.99
SMIM11B-202ENST00000619874 FYCO1Q9BQS8 1478 aa21.25■□□□□ 0.99
SMIM11B-202ENST00000619874 CEP170Q5SW79 1584 aa21.24■□□□□ 0.99
SMIM11B-202ENST00000619874 PCGF6Q9BYE7 350 aa21.23■□□□□ 0.99
SMIM11B-202ENST00000619874 CASKIN1Q8WXD9 1431 aa21.21■□□□□ 0.99
SMIM11B-202ENST00000619874 PCF11O94913 1555 aaKnown RBP21.2■□□□□ 0.98
SMIM11B-202ENST00000619874 FBLN2P98095 1184 aa21.18■□□□□ 0.98
SMIM11B-202ENST00000619874 KIAA0556O60303 1618 aa21.17■□□□□ 0.98
SMIM11B-202ENST00000619874 CHD1O14646 1710 aa21.17■□□□□ 0.98
SMIM11B-202ENST00000619874 CFAP43Q8NDM7 1665 aa21.16■□□□□ 0.98
SMIM11B-202ENST00000619874 TIAM1Q13009 1591 aa21.15■□□□□ 0.98
SMIM11B-202ENST00000619874 REM2Q8IYK8 340 aaPredicted RBP21.15■□□□□ 0.98
SMIM11B-202ENST00000619874 P3H3Q8IVL6 736 aa21.14■□□□□ 0.97
SMIM11B-202ENST00000619874 CARMIL2Q6F5E8 1435 aa21.12■□□□□ 0.97
SMIM11B-202ENST00000619874 DISP1Q96F81 1524 aa21.11■□□□□ 0.97
SMIM11B-202ENST00000619874 PPARGC1BQ86YN6 1023 aaKnown RBP21.11■□□□□ 0.97
SMIM11B-202ENST00000619874 HECW1Q76N89 1606 aa21.08■□□□□ 0.97
SMIM11B-202ENST00000619874 CCDC18Q5T9S5 1454 aa21.07■□□□□ 0.96
SMIM11B-202ENST00000619874 MKRN4PQ13434 485 aaPredicted RBP21.06■□□□□ 0.96
SMIM11B-202ENST00000619874 LRRC9Q6ZRR7 1453 aa21.03■□□□□ 0.96
SMIM11B-202ENST00000619874 JPH4Q96JJ6 628 aa21.03■□□□□ 0.96
SMIM11B-202ENST00000619874 SHROOM2Q13796 1616 aa21■□□□□ 0.95
SMIM11B-202ENST00000619874 TTBK1Q5TCY1 1321 aaPredicted RBP21■□□□□ 0.95
SMIM11B-202ENST00000619874 RAPGEF6Q8TEU7 1601 aa20.96■□□□□ 0.95
SMIM11B-202ENST00000619874 CLASP1Q7Z460 1538 aa20.96■□□□□ 0.95
SMIM11B-202ENST00000619874 ATP1B4Q9UN42 357 aaPredicted RBP20.96■□□□□ 0.95
SMIM11B-202ENST00000619874 KANK4Q5T7N3 995 aaPredicted RBP20.95■□□□□ 0.94
SMIM11B-202ENST00000619874 EHBP1L1Q8N3D4 1523 aa20.94■□□□□ 0.94
SMIM11B-202ENST00000619874 PITPNM1O00562 1244 aa20.93■□□□□ 0.94
SMIM11B-202ENST00000619874 PRG4Q92954 1404 aaPredicted RBP20.92■□□□□ 0.94
SMIM11B-202ENST00000619874 EPRSP07814 1512 aaKnown RBP20.92■□□□□ 0.94
SMIM11B-202ENST00000619874 LRRIQ1Q96JM4 1722 aa20.92■□□□□ 0.94
SMIM11B-202ENST00000619874 MTUS2Q5JR59 1369 aa20.91■□□□□ 0.94
SMIM11B-202ENST00000619874 RRBP1Q9P2E9 1410 aaKnown RBP20.91■□□□□ 0.94
SMIM11B-202ENST00000619874 SPDYE2BA6NHP3 402 aa20.9■□□□□ 0.94
SMIM11B-202ENST00000619874 SPDYE6P0CI01 402 aa20.9■□□□□ 0.94
Retrieved 100 of 20,778 RNA–protein pairs in 11.5 ms