RNA–Protein interactions for RNA: ENST00000619804.1

CPS1-212, Transcript of carbamoyl-phosphate synthase 1, humanhuman

TSL 5 BASIC

Gene CPS1, Length 1,542 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPS1-212ENST00000619804 FGD5Q6ZNL6 1462 aa10.2□□□□□ -0.78
CPS1-212ENST00000619804 FBLN2P98095 1184 aa10.2□□□□□ -0.78
CPS1-212ENST00000619804 URB2Q14146 1524 aaKnown RBP10.2□□□□□ -0.78
CPS1-212ENST00000619804 WDR62O43379 1518 aa10.19□□□□□ -0.78
CPS1-212ENST00000619804 DSG3P32926 999 aa10.18□□□□□ -0.78
CPS1-212ENST00000619804 SOGA1O94964 1423 aa10.18□□□□□ -0.78
CPS1-212ENST00000619804 KIF27Q86VH2 1401 aa10.18□□□□□ -0.78
CPS1-212ENST00000619804 MKRN4PQ13434 485 aaPredicted RBP10.17□□□□□ -0.78
CPS1-212ENST00000619804 ZBTB12Q9Y330 459 aaPredicted RBP10.17□□□□□ -0.78
CPS1-212ENST00000619804 POLA1P09884 1462 aaPredicted RBP10.16□□□□□ -0.78
CPS1-212ENST00000619804 THOC2Q8NI27 1593 aaKnown RBP10.16□□□□□ -0.78
CPS1-212ENST00000619804 FAM9AQ8IZU1 332 aaPredicted RBP10.15□□□□□ -0.78
CPS1-212ENST00000619804 ABCA10Q8WWZ4 1543 aa10.14□□□□□ -0.79
CPS1-212ENST00000619804 WDR97A6NE52 1622 aa10.14□□□□□ -0.79
CPS1-212ENST00000619804 IFT140Q96RY7 1462 aa10.13□□□□□ -0.79
CPS1-212ENST00000619804 CUX2O14529 1486 aa10.13□□□□□ -0.79
CPS1-212ENST00000619804 RAD54L2Q9Y4B4 1467 aa10.09□□□□□ -0.79
CPS1-212ENST00000619804 TARBP1Q13395 1621 aaKnown RBP10.08□□□□□ -0.8
CPS1-212ENST00000619804 SPDYE4A6NLX3 237 aa10.07□□□□□ -0.8
CPS1-212ENST00000619804 GAPVD1Q14C86 1478 aa10.07□□□□□ -0.8
CPS1-212ENST00000619804 CUL7Q14999 1698 aa10.06□□□□□ -0.8
CPS1-212ENST00000619804 ERICH3Q5RHP9 1530 aa10.05□□□□□ -0.8
CPS1-212ENST00000619804 KIF21BO75037 1637 aa10.05□□□□□ -0.8
CPS1-212ENST00000619804 RUSC2Q8N2Y8 1516 aa10.04□□□□□ -0.8
CPS1-212ENST00000619804 ABCA5Q8WWZ7 1642 aa10.04□□□□□ -0.8
CPS1-212ENST00000619804 TDRD9Q8NDG6 1382 aaKnown RBP10.04□□□□□ -0.8
CPS1-212ENST00000619804 GOLGA3Q08378 1498 aa10.04□□□□□ -0.8
CPS1-212ENST00000619804 UBTFP17480 764 aaKnown RBP10.03□□□□□ -0.8
CPS1-212ENST00000619804 PBRM1Q86U86 1689 aa10.03□□□□□ -0.8
CPS1-212ENST00000619804 GRIN2BQ13224 1484 aa10.02□□□□□ -0.8
CPS1-212ENST00000619804 IGF1RP08069 1367 aa10.02□□□□□ -0.81
CPS1-212ENST00000619804 CARMIL1Q5VZK9 1371 aa10.02□□□□□ -0.81
CPS1-212ENST00000619804 RAPGEF2Q9Y4G8 1499 aa10□□□□□ -0.81
CPS1-212ENST00000619804 EIF4G3O43432 1585 aaKnown RBP10□□□□□ -0.81
CPS1-212ENST00000619804 AQRO60306 1485 aaKnown RBP eCLIP9.99□□□□□ -0.81
CPS1-212ENST00000619804 PRXQ9BXM0 1461 aa9.99□□□□□ -0.81
CPS1-212ENST00000619804 LOC105371045A0A1W2PR82 267 aa9.98□□□□□ -0.81
CPS1-212ENST00000619804 MAGI1Q96QZ7 1491 aaPredicted RBP9.97□□□□□ -0.81
CPS1-212ENST00000619804 FHAD1B1AJZ9 1412 aa9.97□□□□□ -0.81
CPS1-212ENST00000619804 TNIKQ9UKE5 1360 aa9.97□□□□□ -0.81
CPS1-212ENST00000619804 ZNF608Q9ULD9 1512 aaPredicted RBP9.96□□□□□ -0.81
CPS1-212ENST00000619804 OSCARQ8IYS5 282 aa9.94□□□□□ -0.82
CPS1-212ENST00000619804 CHMP7Q8WUX9 453 aaPredicted RBP9.94□□□□□ -0.82
CPS1-212ENST00000619804 ADAMTS12P58397 1594 aa9.92□□□□□ -0.82
CPS1-212ENST00000619804 PROM2Q8N271 834 aa9.92□□□□□ -0.82
CPS1-212ENST00000619804 SNAPC4Q5SXM2 1469 aa9.92□□□□□ -0.82
CPS1-212ENST00000619804 CTTNBP2Q8WZ74 1663 aa9.92□□□□□ -0.82
CPS1-212ENST00000619804 SYNJ2O15056 1496 aa9.91□□□□□ -0.82
CPS1-212ENST00000619804 SPDYE2BA6NHP3 402 aa9.89□□□□□ -0.83
CPS1-212ENST00000619804 SPDYE6P0CI01 402 aa9.89□□□□□ -0.83
CPS1-212ENST00000619804 SPDYE2Q495Y8 402 aa9.89□□□□□ -0.83
CPS1-212ENST00000619804 ZNF692Q9BU19 519 aaPredicted RBP9.87□□□□□ -0.83
CPS1-212ENST00000619804 GRIN2AQ12879 1464 aa9.87□□□□□ -0.83
CPS1-212ENST00000619804 FBXO3Q9UK99 471 aa9.87□□□□□ -0.83
CPS1-212ENST00000619804 CEP162Q5TB80 1403 aa9.86□□□□□ -0.83
CPS1-212ENST00000619804 CLIP1P30622 1438 aa9.85□□□□□ -0.83
CPS1-212ENST00000619804 EFCAB5A4FU69 1503 aa9.83□□□□□ -0.84
CPS1-212ENST00000619804 KIAA0586Q9BVV6 1533 aa9.83□□□□□ -0.84
CPS1-212ENST00000619804 IQGAP2Q13576 1575 aa9.83□□□□□ -0.84
CPS1-212ENST00000619804 CHD1O14646 1710 aa9.83□□□□□ -0.84
CPS1-212ENST00000619804 SSUH2Q9Y2M2 353 aa9.82□□□□□ -0.84
CPS1-212ENST00000619804 RANGAP1P46060 587 aaPredicted RBP9.82□□□□□ -0.84
CPS1-212ENST00000619804 CARMIL2Q6F5E8 1435 aa9.79□□□□□ -0.84
CPS1-212ENST00000619804 NUP160Q12769 1436 aa9.78□□□□□ -0.84
CPS1-212ENST00000619804 FMN1Q68DA7 1419 aa9.76□□□□□ -0.85
CPS1-212ENST00000619804 CEP170Q5SW79 1584 aa9.76□□□□□ -0.85
CPS1-212ENST00000619804 UGGT2Q9NYU1 1516 aa9.76□□□□□ -0.85
CPS1-212ENST00000619804 JPH4Q96JJ6 628 aa9.76□□□□□ -0.85
CPS1-212ENST00000619804 VPS8Q8N3P4 1428 aa9.75□□□□□ -0.85
CPS1-212ENST00000619804 ARHGAP35Q9NRY4 1499 aa9.74□□□□□ -0.85
CPS1-212ENST00000619804 AMER1Q5JTC6 1135 aaPredicted RBP9.74□□□□□ -0.85
CPS1-212ENST00000619804 SAMD9Q5K651 1589 aa9.73□□□□□ -0.85
CPS1-212ENST00000619804 RBM42Q9BTD8 480 aaKnown RBP9.73□□□□□ -0.85
CPS1-212ENST00000619804 VASPP50552 380 aaPredicted RBP9.72□□□□□ -0.85
CPS1-212ENST00000619804 P3H3Q8IVL6 736 aa9.71□□□□□ -0.86
CPS1-212ENST00000619804 KIAA0556O60303 1618 aa9.7□□□□□ -0.86
CPS1-212ENST00000619804 RTN4Q9NQC3 1192 aaKnown RBP9.7□□□□□ -0.86
CPS1-212ENST00000619804 ARAP1Q96P48 1450 aa9.68□□□□□ -0.86
CPS1-212ENST00000619804 SHROOM2Q13796 1616 aa9.68□□□□□ -0.86
CPS1-212ENST00000619804 ATP1B4Q9UN42 357 aaPredicted RBP9.68□□□□□ -0.86
CPS1-212ENST00000619804 FHOD3Q2V2M9 1422 aa9.68□□□□□ -0.86
CPS1-212ENST00000619804 PRG4Q92954 1404 aaPredicted RBP9.68□□□□□ -0.86
CPS1-212ENST00000619804 CLASP1Q7Z460 1538 aa9.67□□□□□ -0.86
CPS1-212ENST00000619804 FYCO1Q9BQS8 1478 aa9.66□□□□□ -0.86
CPS1-212ENST00000619804 CASKIN1Q8WXD9 1431 aa9.66□□□□□ -0.86
CPS1-212ENST00000619804 DISP1Q96F81 1524 aa9.65□□□□□ -0.86
CPS1-212ENST00000619804 HECW1Q76N89 1606 aa9.65□□□□□ -0.86
CPS1-212ENST00000619804 STAG3Q9UJ98 1225 aa9.65□□□□□ -0.86
CPS1-212ENST00000619804 CDK11AQ9UQ88 783 aaPredicted RBP9.65□□□□□ -0.86
CPS1-212ENST00000619804 PTPRGP23470 1445 aa9.64□□□□□ -0.87
CPS1-212ENST00000619804 SLC24A1O60721 1099 aa9.64□□□□□ -0.87
CPS1-212ENST00000619804 MAP3K1Q13233 1512 aa9.64□□□□□ -0.87
CPS1-212ENST00000619804 CCDC18Q5T9S5 1454 aa9.63□□□□□ -0.87
CPS1-212ENST00000619804 AKT1S1Q96B36 256 aa9.63□□□□□ -0.87
CPS1-212ENST00000619804 RAPGEF6Q8TEU7 1601 aa9.62□□□□□ -0.87
CPS1-212ENST00000619804 TTBK1Q5TCY1 1321 aaPredicted RBP9.62□□□□□ -0.87
CPS1-212ENST00000619804 PCF11O94913 1555 aaKnown RBP9.61□□□□□ -0.87
CPS1-212ENST00000619804 CFAP43Q8NDM7 1665 aa9.58□□□□□ -0.88
CPS1-212ENST00000619804 TIAM1Q13009 1591 aa9.58□□□□□ -0.88
CPS1-212ENST00000619804 IFNLR1Q8IU57 520 aaPredicted RBP9.58□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms