RNA–Protein interactions for RNA: ENST00000619785.1

SENP3-210, Transcript of SUMO specific peptidase 3, humanhuman

TSL 3

Gene SENP3, Length 634 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SENP3-210ENST00000619785 FBXO3Q9UK99 471 aa14.04□□□□□ -0.16
SENP3-210ENST00000619785 ARAP1Q96P48 1450 aa14.03□□□□□ -0.16
SENP3-210ENST00000619785 DNMBPQ6XZF7 1577 aa14.02□□□□□ -0.16
SENP3-210ENST00000619785 WDR97A6NE52 1622 aa13.97□□□□□ -0.17
SENP3-210ENST00000619785 SPDYE4A6NLX3 237 aa13.96□□□□□ -0.17
SENP3-210ENST00000619785 CCDC88BA6NC98 1476 aa13.95□□□□□ -0.18
SENP3-210ENST00000619785 CLASP1Q7Z460 1538 aa13.95□□□□□ -0.18
SENP3-210ENST00000619785 CYB5RLQ6IPT4 315 aa13.9□□□□□ -0.18
SENP3-210ENST00000619785 POLA1P09884 1462 aaPredicted RBP13.89□□□□□ -0.19
SENP3-210ENST00000619785 AQRO60306 1485 aaKnown RBP eCLIP13.88□□□□□ -0.19
SENP3-210ENST00000619785 FBLN2P98095 1184 aa13.86□□□□□ -0.19
SENP3-210ENST00000619785 SYNJ1O43426 1573 aa13.82□□□□□ -0.2
SENP3-210ENST00000619785 MAGI1Q96QZ7 1491 aaPredicted RBP13.81□□□□□ -0.2
SENP3-210ENST00000619785 MKRN4PQ13434 485 aaPredicted RBP13.8□□□□□ -0.2
SENP3-210ENST00000619785 TRHP20396 242 aaPredicted RBP13.77□□□□□ -0.21
SENP3-210ENST00000619785 VASPP50552 380 aaPredicted RBP13.77□□□□□ -0.21
SENP3-210ENST00000619785 SNAPC4Q5SXM2 1469 aa13.77□□□□□ -0.21
SENP3-210ENST00000619785 RAD54L2Q9Y4B4 1467 aa13.75□□□□□ -0.21
SENP3-210ENST00000619785 SYNJ2O15056 1496 aa13.74□□□□□ -0.21
SENP3-210ENST00000619785 PROM2Q8N271 834 aa13.74□□□□□ -0.21
SENP3-210ENST00000619785 PBRM1Q86U86 1689 aa13.74□□□□□ -0.21
SENP3-210ENST00000619785 SOGA1O94964 1423 aa13.73□□□□□ -0.21
SENP3-210ENST00000619785 GRIN2BQ13224 1484 aa13.72□□□□□ -0.21
SENP3-210ENST00000619785 FGD5Q6ZNL6 1462 aa13.72□□□□□ -0.21
SENP3-210ENST00000619785 TDRD9Q8NDG6 1382 aaKnown RBP13.7□□□□□ -0.22
SENP3-210ENST00000619785 POLA2Q14181 598 aa13.69□□□□□ -0.22
SENP3-210ENST00000619785 CUX1P39880 1505 aa13.69□□□□□ -0.22
SENP3-210ENST00000619785 ABCA5Q8WWZ7 1642 aa13.68□□□□□ -0.22
SENP3-210ENST00000619785 GAPVD1Q14C86 1478 aa13.68□□□□□ -0.22
SENP3-210ENST00000619785 KIF13AQ9H1H9 1805 aa13.67□□□□□ -0.22
SENP3-210ENST00000619785 SHROOM2Q13796 1616 aa13.66□□□□□ -0.22
SENP3-210ENST00000619785 PLCB2Q00722 1185 aa13.66□□□□□ -0.22
SENP3-210ENST00000619785 SPINK5Q9NQ38 1064 aaPredicted RBP13.65□□□□□ -0.22
SENP3-210ENST00000619785 CAPN15O75808 1086 aa13.64□□□□□ -0.23
SENP3-210ENST00000619785 ABCA10Q8WWZ4 1543 aa13.62□□□□□ -0.23
SENP3-210ENST00000619785 IFNLR1Q8IU57 520 aaPredicted RBP13.61□□□□□ -0.23
SENP3-210ENST00000619785 CHMP7Q8WUX9 453 aaPredicted RBP13.6□□□□□ -0.23
SENP3-210ENST00000619785 ERCC6L2Q5T890 1561 aa13.59□□□□□ -0.23
SENP3-210ENST00000619785 NUP160Q12769 1436 aa13.58□□□□□ -0.24
SENP3-210ENST00000619785 CEP170Q5SW79 1584 aa13.58□□□□□ -0.24
SENP3-210ENST00000619785 ZBTB12Q9Y330 459 aaPredicted RBP13.57□□□□□ -0.24
SENP3-210ENST00000619785 ADAMTS12P58397 1594 aa13.57□□□□□ -0.24
SENP3-210ENST00000619785 GRIN2AQ12879 1464 aa13.56□□□□□ -0.24
SENP3-210ENST00000619785 HAP1P54257 671 aaPredicted RBP13.54□□□□□ -0.24
SENP3-210ENST00000619785 RNF39Q9H2S5 420 aa13.51□□□□□ -0.25
SENP3-210ENST00000619785 BIVM-ERCC5R4GMW8 1640 aa13.49□□□□□ -0.25
SENP3-210ENST00000619785 MAPKBP1O60336 1514 aa13.46□□□□□ -0.25
SENP3-210ENST00000619785 ERICH3Q5RHP9 1530 aa13.46□□□□□ -0.25
SENP3-210ENST00000619785 PKD2Q13563 968 aa13.45□□□□□ -0.26
SENP3-210ENST00000619785 C1QBPQ07021 282 aaKnown RBP13.44□□□□□ -0.26
SENP3-210ENST00000619785 TOP2BQ02880 1626 aa13.43□□□□□ -0.26
SENP3-210ENST00000619785 FHAD1B1AJZ9 1412 aa13.43□□□□□ -0.26
SENP3-210ENST00000619785 KLHL34Q8N239 644 aa13.43□□□□□ -0.26
SENP3-210ENST00000619785 DIP2BQ9P265 1576 aa13.43□□□□□ -0.26
SENP3-210ENST00000619785 ABCC10Q5T3U5 1492 aa13.42□□□□□ -0.26
SENP3-210ENST00000619785 ABCB7O75027 752 aa13.42□□□□□ -0.26
SENP3-210ENST00000619785 RUSC2Q8N2Y8 1516 aa13.39□□□□□ -0.27
SENP3-210ENST00000619785 WRNQ14191 1432 aaPredicted RBP eCLIP13.39□□□□□ -0.27
SENP3-210ENST00000619785 SPOCK2Q92563 424 aa13.38□□□□□ -0.27
SENP3-210ENST00000619785 ADCY10Q96PN6 1610 aa13.37□□□□□ -0.27
SENP3-210ENST00000619785 PRG4Q92954 1404 aaPredicted RBP13.34□□□□□ -0.27
SENP3-210ENST00000619785 KDM6BO15054 1643 aa13.33□□□□□ -0.28
SENP3-210ENST00000619785 ZNF692Q9BU19 519 aaPredicted RBP13.33□□□□□ -0.28
SENP3-210ENST00000619785 STAG3Q9UJ98 1225 aa13.33□□□□□ -0.28
SENP3-210ENST00000619785 BCANQ96GW7 911 aa13.32□□□□□ -0.28
SENP3-210ENST00000619785 ZBTB4Q9P1Z0 1013 aaPredicted RBP13.32□□□□□ -0.28
SENP3-210ENST00000619785 ECM2O94769 699 aaPredicted RBP13.31□□□□□ -0.28
SENP3-210ENST00000619785 VSIG10Q8N0Z9 540 aa13.3□□□□□ -0.28
SENP3-210ENST00000619785 KDM4FA0A1W2PPD8 638 aa13.29□□□□□ -0.28
SENP3-210ENST00000619785 PPRC1Q5VV67 1664 aaKnown RBP13.28□□□□□ -0.28
SENP3-210ENST00000619785 PLCD3Q8N3E9 789 aa13.28□□□□□ -0.28
SENP3-210ENST00000619785 JPH4Q96JJ6 628 aa13.27□□□□□ -0.29
SENP3-210ENST00000619785 TSPOAP1O95153 1857 aa13.26□□□□□ -0.29
SENP3-210ENST00000619785 GLI2P10070 1586 aa13.25□□□□□ -0.29
SENP3-210ENST00000619785 BBXQ8WY36 941 aaPredicted RBP13.25□□□□□ -0.29
SENP3-210ENST00000619785 FAM69CQ0P6D2 419 aa13.23□□□□□ -0.29
SENP3-210ENST00000619785 KIAA0586Q9BVV6 1533 aa13.23□□□□□ -0.29
SENP3-210ENST00000619785 SPDYE2BA6NHP3 402 aa13.22□□□□□ -0.29
SENP3-210ENST00000619785 SPDYE6P0CI01 402 aa13.22□□□□□ -0.29
SENP3-210ENST00000619785 SPDYE2Q495Y8 402 aa13.22□□□□□ -0.29
SENP3-210ENST00000619785 CUL7Q14999 1698 aa13.21□□□□□ -0.3
SENP3-210ENST00000619785 MIER1Q8N108 512 aa13.2□□□□□ -0.3
SENP3-210ENST00000619785 PAXIP1Q6ZW49 1069 aaPredicted RBP13.17□□□□□ -0.3
SENP3-210ENST00000619785 ILDR1Q86SU0 546 aaPredicted RBP13.17□□□□□ -0.3
SENP3-210ENST00000619785 CFAP44Q96MT7 982 aa13.17□□□□□ -0.3
SENP3-210ENST00000619785 SSUH2Q9Y2M2 353 aa13.16□□□□□ -0.3
SENP3-210ENST00000619785 MAP3K4Q9Y6R4 1608 aa13.16□□□□□ -0.3
SENP3-210ENST00000619785 ABCC2Q92887 1545 aa13.15□□□□□ -0.3
SENP3-210ENST00000619785 NPM1P06748 294 aaKnown RBP eCLIP13.15□□□□□ -0.3
SENP3-210ENST00000619785 UHRF1BP1LA0JNW5 1464 aa13.15□□□□□ -0.3
SENP3-210ENST00000619785 PLEKHG5O94827 1062 aa13.14□□□□□ -0.31
SENP3-210ENST00000619785 ADGRL1O94910 1474 aa13.13□□□□□ -0.31
SENP3-210ENST00000619785 DSG3P32926 999 aa13.13□□□□□ -0.31
SENP3-210ENST00000619785 PLB1Q6P1J6 1458 aa13.12□□□□□ -0.31
SENP3-210ENST00000619785 HECW2Q9P2P5 1572 aa13.11□□□□□ -0.31
SENP3-210ENST00000619785 IGF1RP08069 1367 aa13.09□□□□□ -0.31
SENP3-210ENST00000619785 RGL2O15211 777 aa13.09□□□□□ -0.31
SENP3-210ENST00000619785 ZBTB47Q9UFB7 747 aaPredicted RBP13.09□□□□□ -0.31
SENP3-210ENST00000619785 COL17A1Q9UMD9 1497 aaPredicted RBP13.09□□□□□ -0.31
SENP3-210ENST00000619785 ASXL2Q76L83 1435 aa13.08□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 8.6 ms