RNA–Protein interactions for RNA: ENST00000619193.4

RDM1-223, Transcript of RAD52 motif containing 1, humanhuman

TSL 1 (best)

Gene RDM1, Length 686 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RDM1-223ENST00000619193 IFT140Q96RY7 1462 aa9.26□□□□□ -0.93
RDM1-223ENST00000619193 KIF13AQ9H1H9 1805 aa9.26□□□□□ -0.93
RDM1-223ENST00000619193 EHMT2Q96KQ7 1210 aa9.25□□□□□ -0.93
RDM1-223ENST00000619193 GOLGA3Q08378 1498 aa9.25□□□□□ -0.93
RDM1-223ENST00000619193 ERCC6L2Q5T890 1561 aa9.24□□□□□ -0.93
RDM1-223ENST00000619193 DCAF8L1A6NGE4 600 aa9.24□□□□□ -0.93
RDM1-223ENST00000619193 FBLN2P98095 1184 aa9.24□□□□□ -0.93
RDM1-223ENST00000619193 ILDR2Q71H61 639 aa9.24□□□□□ -0.93
RDM1-223ENST00000619193 FBXO41Q8TF61 875 aa9.22□□□□□ -0.93
RDM1-223ENST00000619193 AQRO60306 1485 aaKnown RBP eCLIP9.21□□□□□ -0.931e-6■■■■□ 21.5
RDM1-223ENST00000619193 CSRNP3Q8WYN3 585 aa9.21□□□□□ -0.94
RDM1-223ENST00000619193 CFTRP13569 1480 aa9.2□□□□□ -0.94
RDM1-223ENST00000619193 SOCS7O14512 581 aa9.19□□□□□ -0.94
RDM1-223ENST00000619193 GAPVD1Q14C86 1478 aa9.19□□□□□ -0.94
RDM1-223ENST00000619193 BIVM-ERCC5R4GMW8 1640 aa9.19□□□□□ -0.94
RDM1-223ENST00000619193 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP9.18□□□□□ -0.94
RDM1-223ENST00000619193 TOP2BQ02880 1626 aa9.17□□□□□ -0.94
RDM1-223ENST00000619193 TARBP1Q13395 1621 aaKnown RBP9.14□□□□□ -0.95
RDM1-223ENST00000619193 TOPBP1Q92547 1522 aa9.14□□□□□ -0.95
RDM1-223ENST00000619193 ADGRL1O94910 1474 aa9.13□□□□□ -0.95
RDM1-223ENST00000619193 RAPGEF2Q9Y4G8 1499 aa9.13□□□□□ -0.95
RDM1-223ENST00000619193 VPS8Q8N3P4 1428 aa9.13□□□□□ -0.95
RDM1-223ENST00000619193 CLIP1P30622 1438 aa9.12□□□□□ -0.95
RDM1-223ENST00000619193 KDM6BO15054 1643 aa9.12□□□□□ -0.95
RDM1-223ENST00000619193 SYNJ2O15056 1496 aa9.11□□□□□ -0.95
RDM1-223ENST00000619193 SNAPC4Q5SXM2 1469 aa9.1□□□□□ -0.95
RDM1-223ENST00000619193 PRXQ9BXM0 1461 aa9.1□□□□□ -0.95
RDM1-223ENST00000619193 ERICH3Q5RHP9 1530 aa9.1□□□□□ -0.95
RDM1-223ENST00000619193 PRDM2Q13029 1718 aa9.09□□□□□ -0.95
RDM1-223ENST00000619193 CCER1Q8TC90 406 aaPredicted RBP9.09□□□□□ -0.95
RDM1-223ENST00000619193 CUX1P39880 1505 aa9.07□□□□□ -0.96
RDM1-223ENST00000619193 DISP3Q9P2K9 1392 aa9.07□□□□□ -0.96
RDM1-223ENST00000619193 ACIN1Q9UKV3 1341 aaKnown RBP9.05□□□□□ -0.96
RDM1-223ENST00000619193 NEUROD1Q13562 356 aa9.04□□□□□ -0.96
RDM1-223ENST00000619193 TSPOAP1O95153 1857 aa9.03□□□□□ -0.96
RDM1-223ENST00000619193 UBTFP17480 764 aaKnown RBP9.03□□□□□ -0.96
RDM1-223ENST00000619193 DIP2BQ9P265 1576 aa9.03□□□□□ -0.96
RDM1-223ENST00000619193 RAD54L2Q9Y4B4 1467 aa9.02□□□□□ -0.96
RDM1-223ENST00000619193 TDRD9Q8NDG6 1382 aaKnown RBP9.02□□□□□ -0.97
RDM1-223ENST00000619193 DNMBPQ6XZF7 1577 aa9.02□□□□□ -0.97
RDM1-223ENST00000619193 POLA1P09884 1462 aaPredicted RBP9.01□□□□□ -0.97
RDM1-223ENST00000619193 FAM69CQ0P6D2 419 aa9□□□□□ -0.97
RDM1-223ENST00000619193 DIEXFQ68CQ4 756 aaKnown RBP9□□□□□ -0.97
RDM1-223ENST00000619193 CHMP7Q8WUX9 453 aaPredicted RBP9□□□□□ -0.97
RDM1-223ENST00000619193 ABCC10Q5T3U5 1492 aa9□□□□□ -0.97
RDM1-223ENST00000619193 RNF39Q9H2S5 420 aa8.99□□□□□ -0.97
RDM1-223ENST00000619193 TTBK1Q5TCY1 1321 aaPredicted RBP8.99□□□□□ -0.97
RDM1-223ENST00000619193 ZNF316A6NFI3 1004 aaPredicted RBP8.98□□□□□ -0.97
RDM1-223ENST00000619193 RRBP1Q9P2E9 1410 aaKnown RBP8.97□□□□□ -0.97
RDM1-223ENST00000619193 GRWD1Q9BQ67 446 aaKnown RBP eCLIP8.97□□□□□ -0.97
RDM1-223ENST00000619193 CEP170Q5SW79 1584 aa8.97□□□□□ -0.97
RDM1-223ENST00000619193 SPATA31D1Q6ZQQ2 1576 aa8.97□□□□□ -0.97
RDM1-223ENST00000619193 MAGI1Q96QZ7 1491 aaPredicted RBP8.96□□□□□ -0.97
RDM1-223ENST00000619193 ARHGAP35Q9NRY4 1499 aa8.96□□□□□ -0.97
RDM1-223ENST00000619193 PELP1Q8IZL8 1130 aaKnown RBP8.95□□□□□ -0.98
RDM1-223ENST00000619193 SLC4A1APQ9BWU0 796 aaKnown RBP8.95□□□□□ -0.98
RDM1-223ENST00000619193 DHX57Q6P158 1386 aaKnown RBP8.95□□□□□ -0.98
RDM1-223ENST00000619193 KIF27Q86VH2 1401 aa8.92□□□□□ -0.98
RDM1-223ENST00000619193 MAP3K1Q13233 1512 aa8.91□□□□□ -0.98
RDM1-223ENST00000619193 KANK4Q5T7N3 995 aaPredicted RBP8.91□□□□□ -0.98
RDM1-223ENST00000619193 PBRM1Q86U86 1689 aa8.91□□□□□ -0.98
RDM1-223ENST00000619193 MAPKBP1O60336 1514 aa8.9□□□□□ -0.98
RDM1-223ENST00000619193 CLSPNQ9HAW4 1339 aa8.9□□□□□ -0.98
RDM1-223ENST00000619193 SLC4A2P04920 1241 aa8.9□□□□□ -0.98
RDM1-223ENST00000619193 HNRNPUL2Q1KMD3 747 aaKnown RBP8.9□□□□□ -0.98
RDM1-223ENST00000619193 GRIN2BQ13224 1484 aa8.89□□□□□ -0.99
RDM1-223ENST00000619193 PPRC1Q5VV67 1664 aaKnown RBP8.89□□□□□ -0.99
RDM1-223ENST00000619193 SHROOM2Q13796 1616 aa8.89□□□□□ -0.99
RDM1-223ENST00000619193 GTF3C3Q9Y5Q9 886 aa8.88□□□□□ -0.99
RDM1-223ENST00000619193 COL17A1Q9UMD9 1497 aaPredicted RBP8.88□□□□□ -0.99
RDM1-223ENST00000619193 IGF1RP08069 1367 aa8.87□□□□□ -0.99
RDM1-223ENST00000619193 TIAM1Q13009 1591 aa8.87□□□□□ -0.99
RDM1-223ENST00000619193 MIER1Q8N108 512 aa8.87□□□□□ -0.99
RDM1-223ENST00000619193 CFAP43Q8NDM7 1665 aa8.87□□□□□ -0.99
RDM1-223ENST00000619193 C1QBPQ07021 282 aaKnown RBP8.86□□□□□ -0.99
RDM1-223ENST00000619193 WDR97A6NE52 1622 aa8.86□□□□□ -0.99
RDM1-223ENST00000619193 ADCY10Q96PN6 1610 aa8.86□□□□□ -0.99
RDM1-223ENST00000619193 FGD5Q6ZNL6 1462 aa8.84□□□□□ -0.99
RDM1-223ENST00000619193 CENPBP07199 599 aaPredicted RBP8.84□□□□□ -0.99
RDM1-223ENST00000619193 U3KPZ7 1027 aaPredicted RBP8.84□□□□□ -0.99
RDM1-223ENST00000619193 CACNB1Q02641 598 aaPredicted RBP8.83□□□□□ -1
RDM1-223ENST00000619193 GRIN2AQ12879 1464 aa8.83□□□□□ -1
RDM1-223ENST00000619193 CCNB3Q8WWL7 1395 aa8.82□□□□□ -1
RDM1-223ENST00000619193 NUP160Q12769 1436 aa8.81□□□□□ -1
RDM1-223ENST00000619193 PCF11O94913 1555 aaKnown RBP8.81□□□□□ -1
RDM1-223ENST00000619193 LRRC9Q6ZRR7 1453 aa8.8□□□□□ -1
RDM1-223ENST00000619193 PRG4Q92954 1404 aaPredicted RBP8.79□□□□□ -1
RDM1-223ENST00000619193 CARMIL1Q5VZK9 1371 aa8.78□□□□□ -1
RDM1-223ENST00000619193 CERKQ8TCT0 537 aa8.78□□□□□ -1
RDM1-223ENST00000619193 ABCA10Q8WWZ4 1543 aa8.78□□□□□ -1
RDM1-223ENST00000619193 PHLDB1Q86UU1 1377 aa8.77□□□□□ -1.01
RDM1-223ENST00000619193 ABCA5Q8WWZ7 1642 aa8.77□□□□□ -1.01
RDM1-223ENST00000619193 APLP2Q06481 763 aa8.77□□□□□ -1.01
RDM1-223ENST00000619193 ADAMTS12P58397 1594 aa8.77□□□□□ -1.01
RDM1-223ENST00000619193 RAB3GAP2Q9H2M9 1393 aa8.75□□□□□ -1.01
RDM1-223ENST00000619193 RANGAP1P46060 587 aaPredicted RBP8.75□□□□□ -1.01
RDM1-223ENST00000619193 EFCAB5A4FU69 1503 aa8.75□□□□□ -1.01
RDM1-223ENST00000619193 NPM1P06748 294 aaKnown RBP eCLIP8.74□□□□□ -1.01
RDM1-223ENST00000619193 LRRIQ1Q96JM4 1722 aa8.74□□□□□ -1.01
RDM1-223ENST00000619193 CUL7Q14999 1698 aa8.73□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 11 ms