RNA–Protein interactions for RNA: ENST00000619009.4

BARD1-213, Transcript of BRCA1 associated RING domain 1, humanhuman

TSL 1 (best) BASIC

Gene BARD1, Length 3,967 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BARD1-213ENST00000619009 FGD5Q6ZNL6 1462 aa13.82□□□□□ -0.2
BARD1-213ENST00000619009 NEFLP07196 543 aa13.81□□□□□ -0.2
BARD1-213ENST00000619009 PEG3Q9GZU2 1588 aa13.8□□□□□ -0.2
BARD1-213ENST00000619009 KANK4Q5T7N3 995 aaPredicted RBP13.79□□□□□ -0.2
BARD1-213ENST00000619009 CUX1P39880 1505 aa13.78□□□□□ -0.2
BARD1-213ENST00000619009 CLSPNQ9HAW4 1339 aa13.78□□□□□ -0.2
BARD1-213ENST00000619009 ZNF777Q9ULD5 760 aaPredicted RBP13.78□□□□□ -0.2
BARD1-213ENST00000619009 IGF1RP08069 1367 aa13.76□□□□□ -0.21
BARD1-213ENST00000619009 MYT1LQ9UL68 1186 aa13.76□□□□□ -0.21
BARD1-213ENST00000619009 DHX57Q6P158 1386 aaKnown RBP13.76□□□□□ -0.21
BARD1-213ENST00000619009 AQRO60306 1485 aaKnown RBP eCLIP13.75□□□□□ -0.21
BARD1-213ENST00000619009 TRIM52Q96A61 297 aa13.73□□□□□ -0.21
BARD1-213ENST00000619009 CHIC2Q9UKJ5 165 aa13.73□□□□□ -0.21
BARD1-213ENST00000619009 ERICH6Q7L0X2 663 aa13.73□□□□□ -0.21
BARD1-213ENST00000619009 HIRIP3Q9BW71 556 aaPredicted RBP13.7□□□□□ -0.22
BARD1-213ENST00000619009 IRX6P78412 446 aaPredicted RBP13.67□□□□□ -0.22
BARD1-213ENST00000619009 DDX10Q13206 875 aaKnown RBP13.66□□□□□ -0.22
BARD1-213ENST00000619009 TOPBP1Q92547 1522 aa13.66□□□□□ -0.22
BARD1-213ENST00000619009 POLA1P09884 1462 aaPredicted RBP13.66□□□□□ -0.22
BARD1-213ENST00000619009 FHOD3Q2V2M9 1422 aa13.65□□□□□ -0.22
BARD1-213ENST00000619009 MTUS2Q5JR59 1369 aa13.63□□□□□ -0.23
BARD1-213ENST00000619009 TOP2BQ02880 1626 aa13.62□□□□□ -0.23
BARD1-213ENST00000619009 ANO8Q9HCE9 1232 aaPredicted RBP13.62□□□□□ -0.23
BARD1-213ENST00000619009 GAPVD1Q14C86 1478 aa13.61□□□□□ -0.23
BARD1-213ENST00000619009 VPS8Q8N3P4 1428 aa13.59□□□□□ -0.23
BARD1-213ENST00000619009 URB2Q14146 1524 aaKnown RBP13.58□□□□□ -0.24
BARD1-213ENST00000619009 CNGB1Q14028 1251 aaPredicted RBP13.58□□□□□ -0.24
BARD1-213ENST00000619009 RRP7BPQ9NSQ0 103 aa13.57□□□□□ -0.24
BARD1-213ENST00000619009 JPH4Q96JJ6 628 aa13.54□□□□□ -0.24
BARD1-213ENST00000619009 DEKP35659 375 aaKnown RBP13.53□□□□□ -0.24
BARD1-213ENST00000619009 CDK11AQ9UQ88 783 aaPredicted RBP13.53□□□□□ -0.24
BARD1-213ENST00000619009 SIN3AQ96ST3 1273 aa13.52□□□□□ -0.24
BARD1-213ENST00000619009 ZNF608Q9ULD9 1512 aaPredicted RBP13.52□□□□□ -0.24
BARD1-213ENST00000619009 ANP32CO43423 234 aa13.52□□□□□ -0.25
BARD1-213ENST00000619009 PRXQ9BXM0 1461 aa13.51□□□□□ -0.25
BARD1-213ENST00000619009 KIF21BO75037 1637 aa13.49□□□□□ -0.25
BARD1-213ENST00000619009 ARAP1Q96P48 1450 aa13.49□□□□□ -0.25
BARD1-213ENST00000619009 MRC2Q9UBG0 1479 aa13.49□□□□□ -0.25
BARD1-213ENST00000619009 PPP1R15AO75807 674 aaPredicted RBP13.49□□□□□ -0.25
BARD1-213ENST00000619009 POLR3GLQ9BT43 218 aa13.49□□□□□ -0.25
BARD1-213ENST00000619009 LAMC3Q9Y6N6 1575 aa13.48□□□□□ -0.25
BARD1-213ENST00000619009 ZNF326Q5BKZ1 582 aaKnown RBP13.48□□□□□ -0.25
BARD1-213ENST00000619009 NBR1Q14596 966 aa13.47□□□□□ -0.25
BARD1-213ENST00000619009 DNMBPQ6XZF7 1577 aa13.47□□□□□ -0.25
BARD1-213ENST00000619009 CCDC136Q96JN2 1154 aa13.47□□□□□ -0.25
BARD1-213ENST00000619009 SALL2Q9Y467 1007 aaPredicted RBP13.47□□□□□ -0.25
BARD1-213ENST00000619009 WDR97A6NE52 1622 aa13.47□□□□□ -0.25
BARD1-213ENST00000619009 PLEKHD1A6NEE1 506 aa13.46□□□□□ -0.25
BARD1-213ENST00000619009 FANCIQ9NVI1 1328 aa13.46□□□□□ -0.25
BARD1-213ENST00000619009 PAK3O75914 559 aaPredicted RBP13.45□□□□□ -0.26
BARD1-213ENST00000619009 MAPKBP1O60336 1514 aa13.44□□□□□ -0.26
BARD1-213ENST00000619009 ARHGAP35Q9NRY4 1499 aa13.43□□□□□ -0.26
BARD1-213ENST00000619009 GRWD1Q9BQ67 446 aaKnown RBP eCLIP13.43□□□□□ -0.264e-6■■■■□ 19.8
BARD1-213ENST00000619009 CFDP1Q9UEE9 299 aaPredicted RBP13.42□□□□□ -0.26
BARD1-213ENST00000619009 FHAD1B1AJZ9 1412 aa13.41□□□□□ -0.26
BARD1-213ENST00000619009 CCNB3Q8WWL7 1395 aa13.4□□□□□ -0.26
BARD1-213ENST00000619009 RAB3GAP2Q9H2M9 1393 aa13.4□□□□□ -0.26
BARD1-213ENST00000619009 ABCA10Q8WWZ4 1543 aa13.4□□□□□ -0.27
BARD1-213ENST00000619009 NPM1P06748 294 aaKnown RBP eCLIP13.39□□□□□ -0.27
BARD1-213ENST00000619009 SENP3Q9H4L4 574 aaPredicted RBP13.39□□□□□ -0.27
BARD1-213ENST00000619009 SNAPC4Q5SXM2 1469 aa13.38□□□□□ -0.27
BARD1-213ENST00000619009 RTN4Q9NQC3 1192 aaKnown RBP13.38□□□□□ -0.27
BARD1-213ENST00000619009 HNRNPUQ00839 825 aaKnown RBP eCLIP13.38□□□□□ -0.27
BARD1-213ENST00000619009 BIVM-ERCC5R4GMW8 1640 aa13.38□□□□□ -0.27
BARD1-213ENST00000619009 IL27Q8NEV9 243 aa13.38□□□□□ -0.27
BARD1-213ENST00000619009 GRIN2BQ13224 1484 aa13.38□□□□□ -0.27
BARD1-213ENST00000619009 KIF21AQ7Z4S6 1674 aa13.37□□□□□ -0.27
BARD1-213ENST00000619009 B4GALNT3Q6L9W6 998 aa13.37□□□□□ -0.27
BARD1-213ENST00000619009 FOXD1Q16676 465 aa13.36□□□□□ -0.27
BARD1-213ENST00000619009 CCDC184Q52MB2 194 aa13.34□□□□□ -0.27
BARD1-213ENST00000619009 ZNF644Q9H582 1327 aaPredicted RBP13.34□□□□□ -0.27
BARD1-213ENST00000619009 PLPPR3Q6T4P5 718 aa13.34□□□□□ -0.27
BARD1-213ENST00000619009 FMN1Q68DA7 1419 aa13.33□□□□□ -0.27
BARD1-213ENST00000619009 RRBP1Q9P2E9 1410 aaKnown RBP13.33□□□□□ -0.27
BARD1-213ENST00000619009 IFT140Q96RY7 1462 aa13.33□□□□□ -0.28
BARD1-213ENST00000619009 ZBTB4Q9P1Z0 1013 aaPredicted RBP13.32□□□□□ -0.28
BARD1-213ENST00000619009 TSPY4P0CV99 314 aa13.32□□□□□ -0.28
BARD1-213ENST00000619009 TSPY10P0CW01 314 aa13.32□□□□□ -0.28
BARD1-213ENST00000619009 ERICH3Q5RHP9 1530 aa13.31□□□□□ -0.28
BARD1-213ENST00000619009 CYB5RLQ6IPT4 315 aa13.31□□□□□ -0.28
BARD1-213ENST00000619009 PHLDB1Q86UU1 1377 aa13.3□□□□□ -0.28
BARD1-213ENST00000619009 CARMIL2Q6F5E8 1435 aa13.3□□□□□ -0.28
BARD1-213ENST00000619009 SENP3-EIF4A1A0A087X0R7 540 aa13.29□□□□□ -0.28
BARD1-213ENST00000619009 CCER2I3L3R5 266 aa13.28□□□□□ -0.28
BARD1-213ENST00000619009 HNRNPMP52272 730 aaKnown RBP eCLIP13.28□□□□□ -0.28
BARD1-213ENST00000619009 PTPRGP23470 1445 aa13.26□□□□□ -0.29
BARD1-213ENST00000619009 SLC4A1APQ9BWU0 796 aaKnown RBP13.26□□□□□ -0.29
BARD1-213ENST00000619009 TONSLQ96HA7 1378 aa13.26□□□□□ -0.29
BARD1-213ENST00000619009 KDM2AQ9Y2K7 1162 aa13.26□□□□□ -0.29
BARD1-213ENST00000619009 OSCARQ8IYS5 282 aa13.25□□□□□ -0.29
BARD1-213ENST00000619009 NOP58Q9Y2X3 529 aaKnown RBP13.25□□□□□ -0.29
BARD1-213ENST00000619009 PRG4Q92954 1404 aaPredicted RBP13.22□□□□□ -0.29
BARD1-213ENST00000619009 FAM9BQ8IZU0 186 aa13.22□□□□□ -0.29
BARD1-213ENST00000619009 RGL3Q3MIN7 710 aa13.21□□□□□ -0.29
BARD1-213ENST00000619009 RTL5Q5HYW3 569 aaPredicted RBP13.21□□□□□ -0.29
BARD1-213ENST00000619009 CHGAP10645 457 aaKnown RBP13.21□□□□□ -0.3
BARD1-213ENST00000619009 PRDM2Q13029 1718 aa13.2□□□□□ -0.3
BARD1-213ENST00000619009 SETD5Q9C0A6 1442 aa13.19□□□□□ -0.3
BARD1-213ENST00000619009 PPP4R2Q9NY27 417 aa13.19□□□□□ -0.3
BARD1-213ENST00000619009 LRRC9Q6ZRR7 1453 aa13.18□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms