RNA–Protein interactions for RNA: ENST00000618687.4

LINC01515-216, Transcript of long intergenic non-protein coding RNA 1515, humanhuman

TSL 5

Gene LINC01515, Length 632 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01515-216ENST00000618687 SPDYE2Q495Y8 402 aa10.62□□□□□ -0.71
LINC01515-216ENST00000618687 ZNF692Q9BU19 519 aaPredicted RBP10.62□□□□□ -0.71
LINC01515-216ENST00000618687 REM2Q8IYK8 340 aaPredicted RBP10.59□□□□□ -0.71
LINC01515-216ENST00000618687 FANCD2Q9BXW9 1451 aa10.58□□□□□ -0.72
LINC01515-216ENST00000618687 PDS5BQ9NTI5 1447 aa10.58□□□□□ -0.72
LINC01515-216ENST00000618687 CUX1P39880 1505 aa10.57□□□□□ -0.72
LINC01515-216ENST00000618687 SPDYE4A6NLX3 237 aa10.56□□□□□ -0.72
LINC01515-216ENST00000618687 SSUH2Q9Y2M2 353 aa10.55□□□□□ -0.72
LINC01515-216ENST00000618687 CEP164Q9UPV0 1460 aa10.54□□□□□ -0.72
LINC01515-216ENST00000618687 SOGA1O94964 1423 aa10.52□□□□□ -0.73
LINC01515-216ENST00000618687 DNMBPQ6XZF7 1577 aa10.52□□□□□ -0.73
LINC01515-216ENST00000618687 KIF27Q86VH2 1401 aa10.5□□□□□ -0.73
LINC01515-216ENST00000618687 KIF21BO75037 1637 aa10.49□□□□□ -0.73
LINC01515-216ENST00000618687 FAM9AQ8IZU1 332 aaPredicted RBP10.49□□□□□ -0.73
LINC01515-216ENST00000618687 GOLGA3Q08378 1498 aa10.49□□□□□ -0.73
LINC01515-216ENST00000618687 NESP48681 1621 aa10.47□□□□□ -0.73
LINC01515-216ENST00000618687 LOC105371045A0A1W2PR82 267 aa10.47□□□□□ -0.73
LINC01515-216ENST00000618687 PITPNM1O00562 1244 aa10.47□□□□□ -0.73
LINC01515-216ENST00000618687 FKBP8Q14318 412 aa10.47□□□□□ -0.73
LINC01515-216ENST00000618687 FGD5Q6ZNL6 1462 aa10.46□□□□□ -0.74
LINC01515-216ENST00000618687 TOPBP1Q92547 1522 aa10.46□□□□□ -0.74
LINC01515-216ENST00000618687 TNIKQ9UKE5 1360 aa10.45□□□□□ -0.74
LINC01515-216ENST00000618687 ERICH3Q5RHP9 1530 aa10.44□□□□□ -0.74
LINC01515-216ENST00000618687 RUSC2Q8N2Y8 1516 aa10.42□□□□□ -0.74
LINC01515-216ENST00000618687 ABCA10Q8WWZ4 1543 aa10.42□□□□□ -0.74
LINC01515-216ENST00000618687 PRXQ9BXM0 1461 aa10.42□□□□□ -0.74
LINC01515-216ENST00000618687 SPDYE1Q8NFV5 336 aaPredicted RBP10.41□□□□□ -0.74
LINC01515-216ENST00000618687 CLEC11AQ9Y240 323 aa10.41□□□□□ -0.74
LINC01515-216ENST00000618687 URB2Q14146 1524 aaKnown RBP10.41□□□□□ -0.74
LINC01515-216ENST00000618687 POLA1P09884 1462 aaPredicted RBP10.41□□□□□ -0.74
LINC01515-216ENST00000618687 MRC2Q9UBG0 1479 aa10.41□□□□□ -0.74
LINC01515-216ENST00000618687 CUX2O14529 1486 aa10.4□□□□□ -0.74
LINC01515-216ENST00000618687 PIP4P2Q8N4L2 257 aa10.39□□□□□ -0.75
LINC01515-216ENST00000618687 KIF21AQ7Z4S6 1674 aa10.37□□□□□ -0.75
LINC01515-216ENST00000618687 CEP162Q5TB80 1403 aa10.36□□□□□ -0.75
LINC01515-216ENST00000618687 PROM2Q8N271 834 aa10.36□□□□□ -0.75
LINC01515-216ENST00000618687 WDR62O43379 1518 aa10.35□□□□□ -0.75
LINC01515-216ENST00000618687 WDR97A6NE52 1622 aa10.35□□□□□ -0.75
LINC01515-216ENST00000618687 UBTFP17480 764 aaKnown RBP10.34□□□□□ -0.75
LINC01515-216ENST00000618687 FXR2P51116 673 aaKnown RBP eCLIP10.34□□□□□ -0.75
LINC01515-216ENST00000618687 RAPGEF2Q9Y4G8 1499 aa10.34□□□□□ -0.75
LINC01515-216ENST00000618687 IGF1RP08069 1367 aa10.33□□□□□ -0.76
LINC01515-216ENST00000618687 ERCC6Q03468 1493 aa10.33□□□□□ -0.76
LINC01515-216ENST00000618687 CUL7Q14999 1698 aa10.32□□□□□ -0.76
LINC01515-216ENST00000618687 IFT140Q96RY7 1462 aa10.3□□□□□ -0.76
LINC01515-216ENST00000618687 RAD54L2Q9Y4B4 1467 aa10.3□□□□□ -0.76
LINC01515-216ENST00000618687 CARMIL1Q5VZK9 1371 aa10.3□□□□□ -0.76
LINC01515-216ENST00000618687 ABCA5Q8WWZ7 1642 aa10.3□□□□□ -0.76
LINC01515-216ENST00000618687 CLIP1P30622 1438 aa10.28□□□□□ -0.76
LINC01515-216ENST00000618687 TARBP1Q13395 1621 aaKnown RBP10.28□□□□□ -0.76
LINC01515-216ENST00000618687 GAPVD1Q14C86 1478 aa10.28□□□□□ -0.76
LINC01515-216ENST00000618687 THOC2Q8NI27 1593 aaKnown RBP10.26□□□□□ -0.77
LINC01515-216ENST00000618687 HAX1O00165 279 aa10.26□□□□□ -0.77
LINC01515-216ENST00000618687 PRR29P0C7W0 189 aa10.25□□□□□ -0.77
LINC01515-216ENST00000618687 PRKAR2AP13861 404 aaKnown RBP10.24□□□□□ -0.77
LINC01515-216ENST00000618687 VPS8Q8N3P4 1428 aa10.23□□□□□ -0.77
LINC01515-216ENST00000618687 GRIN2BQ13224 1484 aa10.23□□□□□ -0.77
LINC01515-216ENST00000618687 TDRD9Q8NDG6 1382 aaKnown RBP10.21□□□□□ -0.78
LINC01515-216ENST00000618687 FHAD1B1AJZ9 1412 aa10.21□□□□□ -0.78
LINC01515-216ENST00000618687 STAG3Q9UJ98 1225 aa10.2□□□□□ -0.78
LINC01515-216ENST00000618687 EFCAB5A4FU69 1503 aa10.19□□□□□ -0.78
LINC01515-216ENST00000618687 TRIM26Q12899 539 aaPredicted RBP10.19□□□□□ -0.78
LINC01515-216ENST00000618687 ADAMTS12P58397 1594 aa10.18□□□□□ -0.78
LINC01515-216ENST00000618687 CHADLQ6NUI6 762 aa10.17□□□□□ -0.78
LINC01515-216ENST00000618687 SP7Q8TDD2 431 aaPredicted RBP10.17□□□□□ -0.78
LINC01515-216ENST00000618687 MAGI1Q96QZ7 1491 aaPredicted RBP10.17□□□□□ -0.78
LINC01515-216ENST00000618687 PBRM1Q86U86 1689 aa10.16□□□□□ -0.78
LINC01515-216ENST00000618687 EIF4G3O43432 1585 aaKnown RBP10.14□□□□□ -0.79
LINC01515-216ENST00000618687 AQRO60306 1485 aaKnown RBP eCLIP10.14□□□□□ -0.79
LINC01515-216ENST00000618687 ARAP1Q96P48 1450 aa10.14□□□□□ -0.79
LINC01515-216ENST00000618687 ARHGAP35Q9NRY4 1499 aa10.14□□□□□ -0.79
LINC01515-216ENST00000618687 CTTNBP2Q8WZ74 1663 aa10.13□□□□□ -0.79
LINC01515-216ENST00000618687 ZNF608Q9ULD9 1512 aaPredicted RBP10.12□□□□□ -0.79
LINC01515-216ENST00000618687 CREBZFQ9NS37 354 aa10.11□□□□□ -0.79
LINC01515-216ENST00000618687 MAP3K1Q13233 1512 aa10.1□□□□□ -0.79
LINC01515-216ENST00000618687 SYNJ2O15056 1496 aa10.1□□□□□ -0.79
LINC01515-216ENST00000618687 SNAPC4Q5SXM2 1469 aa10.1□□□□□ -0.79
LINC01515-216ENST00000618687 FMN1Q68DA7 1419 aa10.09□□□□□ -0.79
LINC01515-216ENST00000618687 PCGF6Q9BYE7 350 aa10.08□□□□□ -0.8
LINC01515-216ENST00000618687 GRIN2AQ12879 1464 aa10.08□□□□□ -0.8
LINC01515-216ENST00000618687 IQGAP2Q13576 1575 aa10.07□□□□□ -0.8
LINC01515-216ENST00000618687 SAMD9Q5K651 1589 aa10.07□□□□□ -0.8
LINC01515-216ENST00000618687 KIAA0586Q9BVV6 1533 aa10.07□□□□□ -0.8
LINC01515-216ENST00000618687 FYCO1Q9BQS8 1478 aa10.06□□□□□ -0.8
LINC01515-216ENST00000618687 MIER1Q8N108 512 aa10.05□□□□□ -0.8
LINC01515-216ENST00000618687 UGGT2Q9NYU1 1516 aa10.05□□□□□ -0.8
LINC01515-216ENST00000618687 FBXO3Q9UK99 471 aa10.04□□□□□ -0.8
LINC01515-216ENST00000618687 CASKIN1Q8WXD9 1431 aa10.04□□□□□ -0.8
LINC01515-216ENST00000618687 RANGAP1P46060 587 aaPredicted RBP10.03□□□□□ -0.8
LINC01515-216ENST00000618687 NUP160Q12769 1436 aa10.03□□□□□ -0.8
LINC01515-216ENST00000618687 C19orf67A6NJJ6 358 aa10.01□□□□□ -0.81
LINC01515-216ENST00000618687 MNX1P50219 401 aaPredicted RBP10.01□□□□□ -0.81
LINC01515-216ENST00000618687 CHMP7Q8WUX9 453 aaPredicted RBP10.01□□□□□ -0.81
LINC01515-216ENST00000618687 FARP1Q9Y4F1 1045 aaPredicted RBP10.01□□□□□ -0.81
LINC01515-216ENST00000618687 FHOD3Q2V2M9 1422 aa10□□□□□ -0.81
LINC01515-216ENST00000618687 EVX2Q03828 476 aa10□□□□□ -0.81
LINC01515-216ENST00000618687 PCF11O94913 1555 aaKnown RBP9.99□□□□□ -0.81
LINC01515-216ENST00000618687 TIAM1Q13009 1591 aa9.99□□□□□ -0.81
LINC01515-216ENST00000618687 CCDC18Q5T9S5 1454 aa9.98□□□□□ -0.81
LINC01515-216ENST00000618687 CFAP43Q8NDM7 1665 aa9.97□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms