RNA–Protein interactions for RNA: ENST00000618687.4

LINC01515-216, Transcript of long intergenic non-protein coding RNA 1515, humanhuman

TSL 5

Gene LINC01515, Length 632 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01515-216ENST00000618687 AEBP2Q6ZN18 517 aaPredicted RBP19.17■□□□□ 0.66
LINC01515-216ENST00000618687 CHIC1Q5VXU3 224 aa18.52■□□□□ 0.56
LINC01515-216ENST00000618687 SENP3Q9H4L4 574 aaPredicted RBP16.44■□□□□ 0.22
LINC01515-216ENST00000618687 PHF23Q9BUL5 403 aaPredicted RBP16.37■□□□□ 0.21
LINC01515-216ENST00000618687 FOXD1Q16676 465 aa15.23■□□□□ 0.03
LINC01515-216ENST00000618687 PLPPR3Q6T4P5 718 aa14.94□□□□□ -0.02
LINC01515-216ENST00000618687 NISCHQ9Y2I1 1504 aa14.68□□□□□ -0.06
LINC01515-216ENST00000618687 PPP6R1Q9UPN7 881 aa14.52□□□□□ -0.09
LINC01515-216ENST00000618687 ADRA2BP18089 450 aa14.47□□□□□ -0.09
LINC01515-216ENST00000618687 PIAS4Q8N2W9 510 aaPredicted RBP14.35□□□□□ -0.11
LINC01515-216ENST00000618687 MSH5O43196 834 aa14.3□□□□□ -0.12
LINC01515-216ENST00000618687 POTEDQ86YR6 584 aa13.69□□□□□ -0.22
LINC01515-216ENST00000618687 SCAF1Q9H7N4 1312 aaKnown RBP13.21□□□□□ -0.29
LINC01515-216ENST00000618687 PPP4R3CPQ6ZMV5 832 aa13.21□□□□□ -0.29
LINC01515-216ENST00000618687 MAPK8IP2Q13387 824 aaPredicted RBP13.2□□□□□ -0.3
LINC01515-216ENST00000618687 DMRT2Q9Y5R5 561 aa13.01□□□□□ -0.33
LINC01515-216ENST00000618687 CCDC180Q9P1Z9 1646 aa12.84□□□□□ -0.35
LINC01515-216ENST00000618687 CNKSR2Q8WXI2 1034 aa12.81□□□□□ -0.36
LINC01515-216ENST00000618687 KCNA4P22459 653 aa12.8□□□□□ -0.36
LINC01515-216ENST00000618687 NCBP3Q53F19 620 aaKnown RBP12.74□□□□□ -0.37
LINC01515-216ENST00000618687 NPM3O75607 178 aaKnown RBP12.65□□□□□ -0.38
LINC01515-216ENST00000618687 DCAF8L1A6NGE4 600 aa12.6□□□□□ -0.39
LINC01515-216ENST00000618687 HOXD11P31277 338 aaPredicted RBP12.6□□□□□ -0.39
LINC01515-216ENST00000618687 RNF216Q9NWF9 866 aaPredicted RBP12.6□□□□□ -0.39
LINC01515-216ENST00000618687 ZCCHC6Q5VYS8 1495 aaKnown RBP12.36□□□□□ -0.43
LINC01515-216ENST00000618687 DCAF1Q9Y4B6 1507 aa12.25□□□□□ -0.45
LINC01515-216ENST00000618687 CACNB1Q02641 598 aaPredicted RBP12.22□□□□□ -0.45
LINC01515-216ENST00000618687 DNAJC5BQ9UF47 199 aa12.21□□□□□ -0.45
LINC01515-216ENST00000618687 RNF39Q9H2S5 420 aa12.15□□□□□ -0.46
LINC01515-216ENST00000618687 MYO15BQ96JP2 1530 aa12.13□□□□□ -0.47
LINC01515-216ENST00000618687 SLC4A1APQ9BWU0 796 aaKnown RBP12.11□□□□□ -0.47
LINC01515-216ENST00000618687 GRWD1Q9BQ67 446 aaKnown RBP eCLIP12.08□□□□□ -0.489e-6■□□□□ 10.7
LINC01515-216ENST00000618687 C1QBPQ07021 282 aaKnown RBP12.03□□□□□ -0.48
LINC01515-216ENST00000618687 SLC4A2P04920 1241 aa12.01□□□□□ -0.49
LINC01515-216ENST00000618687 NACADO15069 1562 aa11.96□□□□□ -0.49
LINC01515-216ENST00000618687 ABCC9O60706 1549 aa11.96□□□□□ -0.5
LINC01515-216ENST00000618687 DCAF8L2P0C7V8 631 aa11.94□□□□□ -0.5
LINC01515-216ENST00000618687 RB1CC1Q8TDY2 1594 aa11.83□□□□□ -0.52
LINC01515-216ENST00000618687 SHROOM4Q9ULL8 1493 aa11.83□□□□□ -0.52
LINC01515-216ENST00000618687 U3KPZ7 1027 aaPredicted RBP11.82□□□□□ -0.52
LINC01515-216ENST00000618687 ZBTB22O15209 634 aa11.81□□□□□ -0.52
LINC01515-216ENST00000618687 FOXD4L1Q9NU39 408 aa11.73□□□□□ -0.53
LINC01515-216ENST00000618687 EHMT2Q96KQ7 1210 aa11.68□□□□□ -0.54
LINC01515-216ENST00000618687 SCRIBQ14160 1630 aa11.68□□□□□ -0.54
LINC01515-216ENST00000618687 CSRNP3Q8WYN3 585 aa11.63□□□□□ -0.55
LINC01515-216ENST00000618687 CAPN15O75808 1086 aa11.61□□□□□ -0.55
LINC01515-216ENST00000618687 MYCNP04198 464 aaPredicted RBP11.6□□□□□ -0.55
LINC01515-216ENST00000618687 APLP2Q06481 763 aa11.58□□□□□ -0.56
LINC01515-216ENST00000618687 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP11.57□□□□□ -0.56
LINC01515-216ENST00000618687 HNRNPUL2Q1KMD3 747 aaKnown RBP11.57□□□□□ -0.56
LINC01515-216ENST00000618687 SPINK5Q9NQ38 1064 aaPredicted RBP11.57□□□□□ -0.56
LINC01515-216ENST00000618687 SAMD1Q6SPF0 538 aaPredicted RBP11.49□□□□□ -0.57
LINC01515-216ENST00000618687 ATF5Q9Y2D1 282 aaPredicted RBP11.46□□□□□ -0.57
LINC01515-216ENST00000618687 TRHP20396 242 aaPredicted RBP11.44□□□□□ -0.58
LINC01515-216ENST00000618687 ZNF219Q9P2Y4 722 aaPredicted RBP11.43□□□□□ -0.58
LINC01515-216ENST00000618687 DSG3P32926 999 aa11.42□□□□□ -0.58
LINC01515-216ENST00000618687 UNC13AQ9UPW8 1703 aa11.41□□□□□ -0.58
LINC01515-216ENST00000618687 SUPT5HO00267 1087 aaKnown RBP11.41□□□□□ -0.58
LINC01515-216ENST00000618687 BAZ1AQ9NRL2 1556 aaPredicted RBP11.37□□□□□ -0.59
LINC01515-216ENST00000618687 BICRAQ9NZM4 1560 aa11.37□□□□□ -0.59
LINC01515-216ENST00000618687 RSF1Q96T23 1441 aaPredicted RBP11.37□□□□□ -0.59
LINC01515-216ENST00000618687 ABCB7O75027 752 aa11.31□□□□□ -0.6
LINC01515-216ENST00000618687 ATXN8OSP0DMR3 200 aa11.3□□□□□ -0.6
LINC01515-216ENST00000618687 CECR2Q9BXF3 1484 aa11.3□□□□□ -0.6
LINC01515-216ENST00000618687 MROH2BQ7Z745 1585 aa11.27□□□□□ -0.61
LINC01515-216ENST00000618687 SMARCA4P51532 1647 aa11.26□□□□□ -0.61
LINC01515-216ENST00000618687 PABPN1Q86U42 306 aaKnown RBP eCLIP11.23□□□□□ -0.61
LINC01515-216ENST00000618687 POLA2Q14181 598 aa11.22□□□□□ -0.61
LINC01515-216ENST00000618687 PEG3Q9GZU2 1588 aa11.2□□□□□ -0.62
LINC01515-216ENST00000618687 TOP2AP11388 1531 aaKnown RBP11.15□□□□□ -0.62
LINC01515-216ENST00000618687 WIZO95785 1651 aa11.14□□□□□ -0.63
LINC01515-216ENST00000618687 SMARCA2P51531 1590 aa11.14□□□□□ -0.63
LINC01515-216ENST00000618687 ATAD2BQ9ULI0 1458 aa11.08□□□□□ -0.64
LINC01515-216ENST00000618687 EIF4G1Q04637 1599 aaKnown RBP11.07□□□□□ -0.64
LINC01515-216ENST00000618687 BAZ1BQ9UIG0 1483 aaKnown RBP11.04□□□□□ -0.64
LINC01515-216ENST00000618687 HMGXB3Q12766 1538 aa11.04□□□□□ -0.64
LINC01515-216ENST00000618687 NCAPD3P42695 1498 aa11.02□□□□□ -0.65
LINC01515-216ENST00000618687 RBM42Q9BTD8 480 aaKnown RBP10.99□□□□□ -0.65
LINC01515-216ENST00000618687 CCDC88BA6NC98 1476 aa10.98□□□□□ -0.65
LINC01515-216ENST00000618687 ZBTB12Q9Y330 459 aaPredicted RBP10.97□□□□□ -0.65
LINC01515-216ENST00000618687 MKRN4PQ13434 485 aaPredicted RBP10.93□□□□□ -0.66
LINC01515-216ENST00000618687 CC2D2AQ9P2K1 1620 aa10.86□□□□□ -0.67
LINC01515-216ENST00000618687 FBLN2P98095 1184 aa10.83□□□□□ -0.68
LINC01515-216ENST00000618687 TRIM41Q8WV44 630 aa10.83□□□□□ -0.68
LINC01515-216ENST00000618687 OSCARQ8IYS5 282 aa10.8□□□□□ -0.68
LINC01515-216ENST00000618687 POTEHQ6S545 545 aa10.79□□□□□ -0.68
LINC01515-216ENST00000618687 CFTRP13569 1480 aa10.77□□□□□ -0.69
LINC01515-216ENST00000618687 WRNQ14191 1432 aaPredicted RBP eCLIP10.74□□□□□ -0.69
LINC01515-216ENST00000618687 AKT1S1Q96B36 256 aa10.72□□□□□ -0.69
LINC01515-216ENST00000618687 CADPSQ9ULU8 1353 aa10.72□□□□□ -0.69
LINC01515-216ENST00000618687 EEA1Q15075 1411 aa10.71□□□□□ -0.69
LINC01515-216ENST00000618687 ABCC8Q09428 1581 aa10.69□□□□□ -0.7
LINC01515-216ENST00000618687 PRDM2Q13029 1718 aa10.68□□□□□ -0.7
LINC01515-216ENST00000618687 CHRDL2Q6WN34 429 aa10.65□□□□□ -0.7
LINC01515-216ENST00000618687 LAMC3Q9Y6N6 1575 aa10.65□□□□□ -0.71
LINC01515-216ENST00000618687 TOP2BQ02880 1626 aa10.64□□□□□ -0.71
LINC01515-216ENST00000618687 BIVM-ERCC5R4GMW8 1640 aa10.62□□□□□ -0.71
LINC01515-216ENST00000618687 SYNJ1O43426 1573 aa10.62□□□□□ -0.71
LINC01515-216ENST00000618687 SPDYE2BA6NHP3 402 aa10.62□□□□□ -0.71
LINC01515-216ENST00000618687 SPDYE6P0CI01 402 aa10.62□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms