RNA–Protein interactions for RNA: ENST00000618318.1

RPRD1B-208, Transcript of regulation of nuclear pre-mRNA domain containing 1B, humanhuman

TSL 4

Gene RPRD1B, Length 567 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPRD1B-208ENST00000618318 ERICH3Q5RHP9 1530 aa12.44□□□□□ -0.42
RPRD1B-208ENST00000618318 AQRO60306 1485 aaKnown RBP eCLIP12.43□□□□□ -0.42
RPRD1B-208ENST00000618318 CLASP1Q7Z460 1538 aa12.42□□□□□ -0.42
RPRD1B-208ENST00000618318 RAPGEF2Q9Y4G8 1499 aa12.4□□□□□ -0.42
RPRD1B-208ENST00000618318 TDRD9Q8NDG6 1382 aaKnown RBP12.39□□□□□ -0.43
RPRD1B-208ENST00000618318 GAPVD1Q14C86 1478 aa12.39□□□□□ -0.43
RPRD1B-208ENST00000618318 SCAF1Q9H7N4 1312 aaKnown RBP12.38□□□□□ -0.43
RPRD1B-208ENST00000618318 CEP162Q5TB80 1403 aa12.38□□□□□ -0.43
RPRD1B-208ENST00000618318 WDR97A6NE52 1622 aa12.37□□□□□ -0.43
RPRD1B-208ENST00000618318 MAPK8IP2Q13387 824 aaPredicted RBP12.35□□□□□ -0.43
RPRD1B-208ENST00000618318 SNAPC4Q5SXM2 1469 aa12.34□□□□□ -0.43
RPRD1B-208ENST00000618318 FBLN2P98095 1184 aa12.33□□□□□ -0.44
RPRD1B-208ENST00000618318 CLIP1P30622 1438 aa12.33□□□□□ -0.44
RPRD1B-208ENST00000618318 CUL7Q14999 1698 aa12.32□□□□□ -0.44
RPRD1B-208ENST00000618318 GRIN2BQ13224 1484 aa12.32□□□□□ -0.44
RPRD1B-208ENST00000618318 ABCA5Q8WWZ7 1642 aa12.31□□□□□ -0.44
RPRD1B-208ENST00000618318 MAGI1Q96QZ7 1491 aaPredicted RBP12.29□□□□□ -0.44
RPRD1B-208ENST00000618318 APLP2Q06481 763 aa12.29□□□□□ -0.44
RPRD1B-208ENST00000618318 DMRT2Q9Y5R5 561 aa12.29□□□□□ -0.44
RPRD1B-208ENST00000618318 FHAD1B1AJZ9 1412 aa12.28□□□□□ -0.44
RPRD1B-208ENST00000618318 RANGAP1P46060 587 aaPredicted RBP12.28□□□□□ -0.44
RPRD1B-208ENST00000618318 PBRM1Q86U86 1689 aa12.27□□□□□ -0.45
RPRD1B-208ENST00000618318 TRIM26Q12899 539 aaPredicted RBP12.25□□□□□ -0.45
RPRD1B-208ENST00000618318 SYNJ2O15056 1496 aa12.25□□□□□ -0.45
RPRD1B-208ENST00000618318 CHMP7Q8WUX9 453 aaPredicted RBP12.22□□□□□ -0.45
RPRD1B-208ENST00000618318 VPS8Q8N3P4 1428 aa12.21□□□□□ -0.45
RPRD1B-208ENST00000618318 ERCC6L2Q5T890 1561 aa12.18□□□□□ -0.46
RPRD1B-208ENST00000618318 KIF13AQ9H1H9 1805 aa12.17□□□□□ -0.46
RPRD1B-208ENST00000618318 PCGF6Q9BYE7 350 aa12.16□□□□□ -0.46
RPRD1B-208ENST00000618318 ADAMTS12P58397 1594 aa12.16□□□□□ -0.46
RPRD1B-208ENST00000618318 ARHGAP35Q9NRY4 1499 aa12.15□□□□□ -0.46
RPRD1B-208ENST00000618318 EFCAB5A4FU69 1503 aa12.15□□□□□ -0.46
RPRD1B-208ENST00000618318 SHROOM2Q13796 1616 aa12.13□□□□□ -0.47
RPRD1B-208ENST00000618318 GRIN2AQ12879 1464 aa12.12□□□□□ -0.47
RPRD1B-208ENST00000618318 CEP170Q5SW79 1584 aa12.12□□□□□ -0.47
RPRD1B-208ENST00000618318 KIAA0586Q9BVV6 1533 aa12.11□□□□□ -0.47
RPRD1B-208ENST00000618318 CTTNBP2Q8WZ74 1663 aa12.11□□□□□ -0.47
RPRD1B-208ENST00000618318 P3H3Q8IVL6 736 aa12.11□□□□□ -0.47
RPRD1B-208ENST00000618318 FMN1Q68DA7 1419 aa12.1□□□□□ -0.47
RPRD1B-208ENST00000618318 PPARGC1BQ86YN6 1023 aaKnown RBP12.09□□□□□ -0.47
RPRD1B-208ENST00000618318 NUP160Q12769 1436 aa12.07□□□□□ -0.48
RPRD1B-208ENST00000618318 IQGAP2Q13576 1575 aa12.07□□□□□ -0.48
RPRD1B-208ENST00000618318 ATP1B4Q9UN42 357 aaPredicted RBP12.06□□□□□ -0.48
RPRD1B-208ENST00000618318 JPH4Q96JJ6 628 aa12.05□□□□□ -0.48
RPRD1B-208ENST00000618318 FHOD3Q2V2M9 1422 aa12.04□□□□□ -0.48
RPRD1B-208ENST00000618318 CARMIL2Q6F5E8 1435 aa12.03□□□□□ -0.48
RPRD1B-208ENST00000618318 MAP3K1Q13233 1512 aa12.03□□□□□ -0.48
RPRD1B-208ENST00000618318 UGGT2Q9NYU1 1516 aa12.03□□□□□ -0.48
RPRD1B-208ENST00000618318 CASKIN1Q8WXD9 1431 aa12.03□□□□□ -0.48
RPRD1B-208ENST00000618318 SAMD9Q5K651 1589 aa12.01□□□□□ -0.49
RPRD1B-208ENST00000618318 TTBK1Q5TCY1 1321 aaPredicted RBP12□□□□□ -0.49
RPRD1B-208ENST00000618318 FYCO1Q9BQS8 1478 aa12□□□□□ -0.49
RPRD1B-208ENST00000618318 DIP2BQ9P265 1576 aa12□□□□□ -0.49
RPRD1B-208ENST00000618318 MAPKBP1O60336 1514 aa11.98□□□□□ -0.49
RPRD1B-208ENST00000618318 DCAF8L1A6NGE4 600 aa11.98□□□□□ -0.49
RPRD1B-208ENST00000618318 ABCC10Q5T3U5 1492 aa11.97□□□□□ -0.49
RPRD1B-208ENST00000618318 KDM6BO15054 1643 aa11.97□□□□□ -0.49
RPRD1B-208ENST00000618318 KANK4Q5T7N3 995 aaPredicted RBP11.96□□□□□ -0.49
RPRD1B-208ENST00000618318 PPP4R3CPQ6ZMV5 832 aa11.95□□□□□ -0.5
RPRD1B-208ENST00000618318 ADCY10Q96PN6 1610 aa11.94□□□□□ -0.5
RPRD1B-208ENST00000618318 CDK11AQ9UQ88 783 aaPredicted RBP11.94□□□□□ -0.5
RPRD1B-208ENST00000618318 PRG4Q92954 1404 aaPredicted RBP11.94□□□□□ -0.5
RPRD1B-208ENST00000618318 DISP1Q96F81 1524 aa11.93□□□□□ -0.5
RPRD1B-208ENST00000618318 CCDC18Q5T9S5 1454 aa11.93□□□□□ -0.5
RPRD1B-208ENST00000618318 TIAM1Q13009 1591 aa11.92□□□□□ -0.5
RPRD1B-208ENST00000618318 LRRC9Q6ZRR7 1453 aa11.92□□□□□ -0.5
RPRD1B-208ENST00000618318 KIAA0556O60303 1618 aa11.92□□□□□ -0.5
RPRD1B-208ENST00000618318 MTUS2Q5JR59 1369 aa11.92□□□□□ -0.5
RPRD1B-208ENST00000618318 PCF11O94913 1555 aaKnown RBP11.91□□□□□ -0.5
RPRD1B-208ENST00000618318 KDM4FA0A1W2PPD8 638 aa11.9□□□□□ -0.5
RPRD1B-208ENST00000618318 CACNB1Q02641 598 aaPredicted RBP11.9□□□□□ -0.5
RPRD1B-208ENST00000618318 TSPOAP1O95153 1857 aa11.89□□□□□ -0.51
RPRD1B-208ENST00000618318 PTPRGP23470 1445 aa11.88□□□□□ -0.51
RPRD1B-208ENST00000618318 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP11.88□□□□□ -0.51
RPRD1B-208ENST00000618318 FAM69CQ0P6D2 419 aa11.88□□□□□ -0.51
RPRD1B-208ENST00000618318 HNRNPUL2Q1KMD3 747 aaKnown RBP11.88□□□□□ -0.51
RPRD1B-208ENST00000618318 ILDR1Q86SU0 546 aaPredicted RBP11.88□□□□□ -0.51
RPRD1B-208ENST00000618318 HECW1Q76N89 1606 aa11.88□□□□□ -0.51
RPRD1B-208ENST00000618318 ZEB1P37275 1124 aaPredicted RBP11.86□□□□□ -0.51
RPRD1B-208ENST00000618318 RRBP1Q9P2E9 1410 aaKnown RBP11.85□□□□□ -0.51
RPRD1B-208ENST00000618318 CFAP43Q8NDM7 1665 aa11.84□□□□□ -0.51
RPRD1B-208ENST00000618318 CCNB3Q8WWL7 1395 aa11.84□□□□□ -0.51
RPRD1B-208ENST00000618318 EPRSP07814 1512 aaKnown RBP11.84□□□□□ -0.51
RPRD1B-208ENST00000618318 PPRC1Q5VV67 1664 aaKnown RBP11.84□□□□□ -0.51
RPRD1B-208ENST00000618318 PLEKHD1A6NEE1 506 aa11.83□□□□□ -0.52
RPRD1B-208ENST00000618318 RAPGEF6Q8TEU7 1601 aa11.82□□□□□ -0.52
RPRD1B-208ENST00000618318 EHBP1L1Q8N3D4 1523 aa11.81□□□□□ -0.52
RPRD1B-208ENST00000618318 HRCP23327 699 aa11.81□□□□□ -0.52
RPRD1B-208ENST00000618318 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP11.8□□□□□ -0.52
RPRD1B-208ENST00000618318 NPM1P06748 294 aaKnown RBP eCLIP11.8□□□□□ -0.52
RPRD1B-208ENST00000618318 ADGRL1O94910 1474 aa11.8□□□□□ -0.52
RPRD1B-208ENST00000618318 UACAQ9BZF9 1416 aa11.79□□□□□ -0.52
RPRD1B-208ENST00000618318 FAM50AQ14320 339 aaKnown RBP11.79□□□□□ -0.52
RPRD1B-208ENST00000618318 NUP153P49790 1475 aaKnown RBP11.78□□□□□ -0.52
RPRD1B-208ENST00000618318 PLB1Q6P1J6 1458 aa11.78□□□□□ -0.52
RPRD1B-208ENST00000618318 ARID3CA6NKF2 412 aa11.78□□□□□ -0.52
RPRD1B-208ENST00000618318 HECW2Q9P2P5 1572 aa11.78□□□□□ -0.52
RPRD1B-208ENST00000618318 PHLDB1Q86UU1 1377 aa11.78□□□□□ -0.52
RPRD1B-208ENST00000618318 GLI2P10070 1586 aa11.77□□□□□ -0.53
RPRD1B-208ENST00000618318 CNKSR2Q8WXI2 1034 aa11.77□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 8.2 ms