RNA–Protein interactions for RNA: ENST00000617865.4

C1S-221, Transcript of complement C1s, humanhuman

TSL 5 BASIC

Gene C1S, Length 2,844 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C1S-221ENST00000617865 URB2Q14146 1524 aaKnown RBP18.09■□□□□ 0.49
C1S-221ENST00000617865 BCL11AQ9H165 835 aa18.08■□□□□ 0.48
C1S-221ENST00000617865 SIN3AQ96ST3 1273 aa18.07■□□□□ 0.48
C1S-221ENST00000617865 FAM50AQ14320 339 aaKnown RBP18.05■□□□□ 0.48
C1S-221ENST00000617865 CCNB3Q8WWL7 1395 aa18.04■□□□□ 0.48
C1S-221ENST00000617865 POLA1P09884 1462 aaPredicted RBP18.04■□□□□ 0.48
C1S-221ENST00000617865 CUX2O14529 1486 aa18.02■□□□□ 0.48
C1S-221ENST00000617865 SUPT16HQ9Y5B9 1047 aaKnown RBP18.02■□□□□ 0.48
C1S-221ENST00000617865 ARHGAP35Q9NRY4 1499 aa18.02■□□□□ 0.48
C1S-221ENST00000617865 DDX10Q13206 875 aaKnown RBP17.99■□□□□ 0.47
C1S-221ENST00000617865 RAB3GAP2Q9H2M9 1393 aa17.99■□□□□ 0.47
C1S-221ENST00000617865 RAD54L2Q9Y4B4 1467 aa17.99■□□□□ 0.47
C1S-221ENST00000617865 CLSPNQ9HAW4 1339 aa17.98■□□□□ 0.47
C1S-221ENST00000617865 BCANQ96GW7 911 aa17.98■□□□□ 0.47
C1S-221ENST00000617865 ERICH3Q5RHP9 1530 aa17.98■□□□□ 0.47
C1S-221ENST00000617865 ABCA10Q8WWZ4 1543 aa17.98■□□□□ 0.47
C1S-221ENST00000617865 MRC2Q9UBG0 1479 aa17.97■□□□□ 0.47
C1S-221ENST00000617865 RRBP1Q9P2E9 1410 aaKnown RBP17.97■□□□□ 0.47
C1S-221ENST00000617865 IGF1RP08069 1367 aa17.95■□□□□ 0.46
C1S-221ENST00000617865 WDR97A6NE52 1622 aa17.91■□□□□ 0.46
C1S-221ENST00000617865 ERCC6Q03468 1493 aa17.91■□□□□ 0.46
C1S-221ENST00000617865 PHLDB1Q86UU1 1377 aa17.89■□□□□ 0.45
C1S-221ENST00000617865 CARMIL1Q5VZK9 1371 aa17.88■□□□□ 0.45
C1S-221ENST00000617865 WDR62O43379 1518 aa17.87■□□□□ 0.45
C1S-221ENST00000617865 TARBP1Q13395 1621 aaKnown RBP17.85■□□□□ 0.45
C1S-221ENST00000617865 ERICH6Q7L0X2 663 aa17.85■□□□□ 0.45
C1S-221ENST00000617865 ABCA5Q8WWZ7 1642 aa17.82■□□□□ 0.44
C1S-221ENST00000617865 TRIM52Q96A61 297 aa17.82■□□□□ 0.44
C1S-221ENST00000617865 MAPKBP1O60336 1514 aa17.82■□□□□ 0.44
C1S-221ENST00000617865 THOC2Q8NI27 1593 aaKnown RBP17.81■□□□□ 0.44
C1S-221ENST00000617865 SETD5Q9C0A6 1442 aa17.81■□□□□ 0.44
C1S-221ENST00000617865 TDRD9Q8NDG6 1382 aaKnown RBP17.81■□□□□ 0.44
C1S-221ENST00000617865 GAPVD1Q14C86 1478 aa17.79■□□□□ 0.44
C1S-221ENST00000617865 FKBP8Q14318 412 aa17.78■□□□□ 0.44
C1S-221ENST00000617865 TSHZ2Q9NRE2 1034 aa17.78■□□□□ 0.44
C1S-221ENST00000617865 CUL7Q14999 1698 aa17.78■□□□□ 0.44
C1S-221ENST00000617865 FHOD3Q2V2M9 1422 aa17.77■□□□□ 0.44
C1S-221ENST00000617865 IFT140Q96RY7 1462 aa17.77■□□□□ 0.43
C1S-221ENST00000617865 LRRC9Q6ZRR7 1453 aa17.76■□□□□ 0.43
C1S-221ENST00000617865 TIAM1Q13009 1591 aa17.74■□□□□ 0.43
C1S-221ENST00000617865 PPP1R15AO75807 674 aaPredicted RBP17.7■□□□□ 0.42
C1S-221ENST00000617865 AQRO60306 1485 aaKnown RBP eCLIP17.69■□□□□ 0.42
C1S-221ENST00000617865 ARID3CA6NKF2 412 aa17.69■□□□□ 0.42
C1S-221ENST00000617865 PBRM1Q86U86 1689 aa17.69■□□□□ 0.42
C1S-221ENST00000617865 ZNF608Q9ULD9 1512 aaPredicted RBP17.66■□□□□ 0.42
C1S-221ENST00000617865 CHIC2Q9UKJ5 165 aa17.65■□□□□ 0.42
C1S-221ENST00000617865 GRIN2BQ13224 1484 aa17.65■□□□□ 0.42
C1S-221ENST00000617865 PCF11O94913 1555 aaKnown RBP17.63■□□□□ 0.41
C1S-221ENST00000617865 ANP32CO43423 234 aa17.62■□□□□ 0.41
C1S-221ENST00000617865 FHAD1B1AJZ9 1412 aa17.61■□□□□ 0.41
C1S-221ENST00000617865 RRP7BPQ9NSQ0 103 aa17.6■□□□□ 0.41
C1S-221ENST00000617865 EIF4G3O43432 1585 aaKnown RBP17.6■□□□□ 0.41
C1S-221ENST00000617865 IRX6P78412 446 aaPredicted RBP17.6■□□□□ 0.41
C1S-221ENST00000617865 CTTNBP2Q8WZ74 1663 aa17.59■□□□□ 0.41
C1S-221ENST00000617865 ADAMTS12P58397 1594 aa17.58■□□□□ 0.41
C1S-221ENST00000617865 TONSLQ96HA7 1378 aa17.57■□□□□ 0.4
C1S-221ENST00000617865 PTPRKQ15262 1439 aa17.57■□□□□ 0.4
C1S-221ENST00000617865 MTUS2Q5JR59 1369 aa17.56■□□□□ 0.4
C1S-221ENST00000617865 FOXD1Q16676 465 aa17.54■□□□□ 0.4
C1S-221ENST00000617865 MAP3K1Q13233 1512 aa17.53■□□□□ 0.4
C1S-221ENST00000617865 CNGB1Q14028 1251 aaPredicted RBP17.53■□□□□ 0.4
C1S-221ENST00000617865 SNAPC4Q5SXM2 1469 aa17.52■□□□□ 0.39
C1S-221ENST00000617865 NEFLP07196 543 aa17.52■□□□□ 0.39
C1S-221ENST00000617865 FGD6Q6ZV73 1430 aa17.49■□□□□ 0.39
C1S-221ENST00000617865 MAGI1Q96QZ7 1491 aaPredicted RBP17.49■□□□□ 0.39
C1S-221ENST00000617865 HNRNPUQ00839 825 aaKnown RBP eCLIP17.49■□□□□ 0.39
C1S-221ENST00000617865 EFCAB5A4FU69 1503 aa17.48■□□□□ 0.39
C1S-221ENST00000617865 CASKIN1Q8WXD9 1431 aa17.48■□□□□ 0.39
C1S-221ENST00000617865 CCDC18Q5T9S5 1454 aa17.47■□□□□ 0.39
C1S-221ENST00000617865 TIMELESSQ9UNS1 1208 aa17.46■□□□□ 0.39
C1S-221ENST00000617865 CCDC184Q52MB2 194 aa17.45■□□□□ 0.38
C1S-221ENST00000617865 RBM19Q9Y4C8 960 aaKnown RBP17.44■□□□□ 0.38
C1S-221ENST00000617865 SENP3-EIF4A1A0A087X0R7 540 aa17.44■□□□□ 0.38
C1S-221ENST00000617865 CCER2I3L3R5 266 aa17.44■□□□□ 0.38
C1S-221ENST00000617865 GRIN2AQ12879 1464 aa17.43■□□□□ 0.38
C1S-221ENST00000617865 FYCO1Q9BQS8 1478 aa17.43■□□□□ 0.38
C1S-221ENST00000617865 CFAP43Q8NDM7 1665 aa17.43■□□□□ 0.38
C1S-221ENST00000617865 HSPA5P11021 654 aaKnown RBP17.43■□□□□ 0.38
C1S-221ENST00000617865 ANP32EQ9BTT0 268 aa17.43■□□□□ 0.38
C1S-221ENST00000617865 SYNJ2O15056 1496 aa17.42■□□□□ 0.38
C1S-221ENST00000617865 IQGAP2Q13576 1575 aa17.4■□□□□ 0.38
C1S-221ENST00000617865 SAMD9Q5K651 1589 aa17.4■□□□□ 0.38
C1S-221ENST00000617865 CHMP7Q8WUX9 453 aaPredicted RBP17.39■□□□□ 0.38
C1S-221ENST00000617865 WASHC2AQ641Q2 1341 aa17.39■□□□□ 0.37
C1S-221ENST00000617865 NAIPQ13075 1403 aa17.39■□□□□ 0.37
C1S-221ENST00000617865 FMN1Q68DA7 1419 aa17.39■□□□□ 0.37
C1S-221ENST00000617865 C11orf95C9JLR9 678 aaPredicted RBP17.39■□□□□ 0.37
C1S-221ENST00000617865 NCOA2Q15596 1464 aa17.38■□□□□ 0.37
C1S-221ENST00000617865 UACAQ9BZF9 1416 aa17.37■□□□□ 0.37
C1S-221ENST00000617865 FAM9BQ8IZU0 186 aa17.37■□□□□ 0.37
C1S-221ENST00000617865 KIAA0586Q9BVV6 1533 aa17.37■□□□□ 0.37
C1S-221ENST00000617865 HFM1A2PYH4 1435 aa17.36■□□□□ 0.37
C1S-221ENST00000617865 L3MBTL2Q969R5 705 aa17.35■□□□□ 0.37
C1S-221ENST00000617865 DNAJC5Q9H3Z4 198 aa17.35■□□□□ 0.37
C1S-221ENST00000617865 FBLN2P98095 1184 aa17.34■□□□□ 0.37
C1S-221ENST00000617865 MYOM3Q5VTT5 1437 aa17.33■□□□□ 0.37
C1S-221ENST00000617865 UGGT2Q9NYU1 1516 aa17.32■□□□□ 0.36
C1S-221ENST00000617865 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP17.32■□□□□ 0.36
C1S-221ENST00000617865 POLR3GLQ9BT43 218 aa17.32■□□□□ 0.36
C1S-221ENST00000617865 PTPN23Q9H3S7 1636 aa17.32■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms