RNA–Protein interactions for RNA: ENST00000617848.4

CNTNAP3B-213, Transcript of contactin associated protein like 3B, humanhuman

TSL 3

Gene CNTNAP3B, Length 290 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNTNAP3B-213ENST00000617848 TARBP1Q13395 1621 aaKnown RBP13.84□□□□□ -0.19
CNTNAP3B-213ENST00000617848 GAPVD1Q14C86 1478 aa13.83□□□□□ -0.2
CNTNAP3B-213ENST00000617848 THOC2Q8NI27 1593 aaKnown RBP13.83□□□□□ -0.2
CNTNAP3B-213ENST00000617848 ABCA5Q8WWZ7 1642 aa13.8□□□□□ -0.2
CNTNAP3B-213ENST00000617848 AQRO60306 1485 aaKnown RBP eCLIP13.77□□□□□ -0.21
CNTNAP3B-213ENST00000617848 NPM3O75607 178 aaKnown RBP13.77□□□□□ -0.21
CNTNAP3B-213ENST00000617848 CLIP1P30622 1438 aa13.77□□□□□ -0.21
CNTNAP3B-213ENST00000617848 CUL7Q14999 1698 aa13.76□□□□□ -0.21
CNTNAP3B-213ENST00000617848 GRIN2BQ13224 1484 aa13.74□□□□□ -0.21
CNTNAP3B-213ENST00000617848 ZNF608Q9ULD9 1512 aaPredicted RBP13.73□□□□□ -0.21
CNTNAP3B-213ENST00000617848 RANGAP1P46060 587 aaPredicted RBP13.72□□□□□ -0.21
CNTNAP3B-213ENST00000617848 FHAD1B1AJZ9 1412 aa13.71□□□□□ -0.22
CNTNAP3B-213ENST00000617848 PBRM1Q86U86 1689 aa13.67□□□□□ -0.22
CNTNAP3B-213ENST00000617848 KCNA4P22459 653 aa13.65□□□□□ -0.22
CNTNAP3B-213ENST00000617848 EIF4G3O43432 1585 aaKnown RBP13.64□□□□□ -0.23
CNTNAP3B-213ENST00000617848 VPS8Q8N3P4 1428 aa13.64□□□□□ -0.23
CNTNAP3B-213ENST00000617848 TRIM26Q12899 539 aaPredicted RBP13.63□□□□□ -0.23
CNTNAP3B-213ENST00000617848 ADAMTS12P58397 1594 aa13.62□□□□□ -0.23
CNTNAP3B-213ENST00000617848 SNAPC4Q5SXM2 1469 aa13.62□□□□□ -0.23
CNTNAP3B-213ENST00000617848 ARHGAP35Q9NRY4 1499 aa13.62□□□□□ -0.23
CNTNAP3B-213ENST00000617848 ARAP1Q96P48 1450 aa13.61□□□□□ -0.23
CNTNAP3B-213ENST00000617848 MAGI1Q96QZ7 1491 aaPredicted RBP13.61□□□□□ -0.23
CNTNAP3B-213ENST00000617848 CHMP7Q8WUX9 453 aaPredicted RBP13.59□□□□□ -0.23
CNTNAP3B-213ENST00000617848 APLP2Q06481 763 aa13.58□□□□□ -0.24
CNTNAP3B-213ENST00000617848 PCGF6Q9BYE7 350 aa13.58□□□□□ -0.24
CNTNAP3B-213ENST00000617848 PPARGC1BQ86YN6 1023 aaKnown RBP13.57□□□□□ -0.24
CNTNAP3B-213ENST00000617848 CTTNBP2Q8WZ74 1663 aa13.56□□□□□ -0.24
CNTNAP3B-213ENST00000617848 SYNJ2O15056 1496 aa13.56□□□□□ -0.24
CNTNAP3B-213ENST00000617848 GRIN2AQ12879 1464 aa13.55□□□□□ -0.24
CNTNAP3B-213ENST00000617848 EFCAB5A4FU69 1503 aa13.54□□□□□ -0.24
CNTNAP3B-213ENST00000617848 P3H3Q8IVL6 736 aa13.54□□□□□ -0.24
CNTNAP3B-213ENST00000617848 RNF39Q9H2S5 420 aa13.54□□□□□ -0.24
CNTNAP3B-213ENST00000617848 FBLN2P98095 1184 aa13.53□□□□□ -0.24
CNTNAP3B-213ENST00000617848 CACNB1Q02641 598 aaPredicted RBP13.53□□□□□ -0.24
CNTNAP3B-213ENST00000617848 KIAA0586Q9BVV6 1533 aa13.51□□□□□ -0.25
CNTNAP3B-213ENST00000617848 IQGAP2Q13576 1575 aa13.49□□□□□ -0.25
CNTNAP3B-213ENST00000617848 FHOD3Q2V2M9 1422 aa13.48□□□□□ -0.25
CNTNAP3B-213ENST00000617848 SAMD9Q5K651 1589 aa13.47□□□□□ -0.25
CNTNAP3B-213ENST00000617848 NUP160Q12769 1436 aa13.47□□□□□ -0.25
CNTNAP3B-213ENST00000617848 FMN1Q68DA7 1419 aa13.46□□□□□ -0.26
CNTNAP3B-213ENST00000617848 UGGT2Q9NYU1 1516 aa13.45□□□□□ -0.26
CNTNAP3B-213ENST00000617848 TTBK1Q5TCY1 1321 aaPredicted RBP13.44□□□□□ -0.26
CNTNAP3B-213ENST00000617848 GRWD1Q9BQ67 446 aaKnown RBP eCLIP13.44□□□□□ -0.26
CNTNAP3B-213ENST00000617848 CEP170Q5SW79 1584 aa13.43□□□□□ -0.26
CNTNAP3B-213ENST00000617848 CASKIN1Q8WXD9 1431 aa13.42□□□□□ -0.26
CNTNAP3B-213ENST00000617848 JPH4Q96JJ6 628 aa13.42□□□□□ -0.26
CNTNAP3B-213ENST00000617848 ATP1B4Q9UN42 357 aaPredicted RBP13.42□□□□□ -0.26
CNTNAP3B-213ENST00000617848 MAP3K1Q13233 1512 aa13.42□□□□□ -0.26
CNTNAP3B-213ENST00000617848 C1QBPQ07021 282 aaKnown RBP13.4□□□□□ -0.26
CNTNAP3B-213ENST00000617848 KANK4Q5T7N3 995 aaPredicted RBP13.4□□□□□ -0.26
CNTNAP3B-213ENST00000617848 FYCO1Q9BQS8 1478 aa13.39□□□□□ -0.27
CNTNAP3B-213ENST00000617848 DISP1Q96F81 1524 aa13.37□□□□□ -0.27
CNTNAP3B-213ENST00000617848 CARMIL2Q6F5E8 1435 aa13.37□□□□□ -0.27
CNTNAP3B-213ENST00000617848 PCF11O94913 1555 aaKnown RBP13.37□□□□□ -0.27
CNTNAP3B-213ENST00000617848 TIAM1Q13009 1591 aa13.35□□□□□ -0.27
CNTNAP3B-213ENST00000617848 KIAA0556O60303 1618 aa13.35□□□□□ -0.27
CNTNAP3B-213ENST00000617848 CHD1O14646 1710 aa13.33□□□□□ -0.28
CNTNAP3B-213ENST00000617848 LRRC9Q6ZRR7 1453 aa13.32□□□□□ -0.28
CNTNAP3B-213ENST00000617848 PRG4Q92954 1404 aaPredicted RBP13.3□□□□□ -0.28
CNTNAP3B-213ENST00000617848 CFAP43Q8NDM7 1665 aa13.28□□□□□ -0.28
CNTNAP3B-213ENST00000617848 CCDC18Q5T9S5 1454 aa13.28□□□□□ -0.28
CNTNAP3B-213ENST00000617848 HECW1Q76N89 1606 aa13.27□□□□□ -0.29
CNTNAP3B-213ENST00000617848 MTUS2Q5JR59 1369 aa13.25□□□□□ -0.29
CNTNAP3B-213ENST00000617848 EPRSP07814 1512 aaKnown RBP13.24□□□□□ -0.29
CNTNAP3B-213ENST00000617848 PTPRGP23470 1445 aa13.23□□□□□ -0.29
CNTNAP3B-213ENST00000617848 RRBP1Q9P2E9 1410 aaKnown RBP13.23□□□□□ -0.29
CNTNAP3B-213ENST00000617848 SHROOM2Q13796 1616 aa13.23□□□□□ -0.29
CNTNAP3B-213ENST00000617848 CLASP1Q7Z460 1538 aa13.23□□□□□ -0.29
CNTNAP3B-213ENST00000617848 RAPGEF6Q8TEU7 1601 aa13.22□□□□□ -0.29
CNTNAP3B-213ENST00000617848 CDK11AQ9UQ88 783 aaPredicted RBP13.22□□□□□ -0.29
CNTNAP3B-213ENST00000617848 OSCARQ8IYS5 282 aa13.21□□□□□ -0.29
CNTNAP3B-213ENST00000617848 PHLDB1Q86UU1 1377 aa13.2□□□□□ -0.3
CNTNAP3B-213ENST00000617848 CCNB3Q8WWL7 1395 aa13.2□□□□□ -0.3
CNTNAP3B-213ENST00000617848 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP13.2□□□□□ -0.3
CNTNAP3B-213ENST00000617848 HNRNPUL2Q1KMD3 747 aaKnown RBP13.2□□□□□ -0.3
CNTNAP3B-213ENST00000617848 NUP153P49790 1475 aaKnown RBP13.2□□□□□ -0.3
CNTNAP3B-213ENST00000617848 PLB1Q6P1J6 1458 aa13.2□□□□□ -0.3
CNTNAP3B-213ENST00000617848 LRRIQ1Q96JM4 1722 aa13.19□□□□□ -0.3
CNTNAP3B-213ENST00000617848 ARID3CA6NKF2 412 aa13.19□□□□□ -0.3
CNTNAP3B-213ENST00000617848 EHBP1L1Q8N3D4 1523 aa13.18□□□□□ -0.3
CNTNAP3B-213ENST00000617848 HRCP23327 699 aa13.18□□□□□ -0.3
CNTNAP3B-213ENST00000617848 ABCA8O94911 1581 aa13.18□□□□□ -0.3
CNTNAP3B-213ENST00000617848 CDK13Q14004 1512 aaKnown RBP13.18□□□□□ -0.3
CNTNAP3B-213ENST00000617848 NCOA2Q15596 1464 aa13.16□□□□□ -0.3
CNTNAP3B-213ENST00000617848 UACAQ9BZF9 1416 aa13.14□□□□□ -0.31
CNTNAP3B-213ENST00000617848 MAGI3Q5TCQ9 1506 aa13.14□□□□□ -0.31
CNTNAP3B-213ENST00000617848 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP13.14□□□□□ -0.31
CNTNAP3B-213ENST00000617848 SUPT6HQ7KZ85 1726 aaKnown RBP13.13□□□□□ -0.31
CNTNAP3B-213ENST00000617848 ERCC6L2Q5T890 1561 aa13.13□□□□□ -0.31
CNTNAP3B-213ENST00000617848 PLEKHD1A6NEE1 506 aa13.13□□□□□ -0.31
CNTNAP3B-213ENST00000617848 FAM50AQ14320 339 aaKnown RBP13.13□□□□□ -0.31
CNTNAP3B-213ENST00000617848 ATP10BO94823 1461 aa13.12□□□□□ -0.31
CNTNAP3B-213ENST00000617848 U3KPZ7 1027 aaPredicted RBP13.12□□□□□ -0.31
CNTNAP3B-213ENST00000617848 ZEB1P37275 1124 aaPredicted RBP13.11□□□□□ -0.31
CNTNAP3B-213ENST00000617848 ARHGEF11O15085 1522 aa13.11□□□□□ -0.31
CNTNAP3B-213ENST00000617848 TROQ12816 1431 aaPredicted RBP13.11□□□□□ -0.31
CNTNAP3B-213ENST00000617848 MYOM3Q5VTT5 1437 aa13.11□□□□□ -0.31
CNTNAP3B-213ENST00000617848 FGD6Q6ZV73 1430 aa13.11□□□□□ -0.31
CNTNAP3B-213ENST00000617848 ITGAEP38570 1179 aa13.09□□□□□ -0.31
CNTNAP3B-213ENST00000617848 CCER1Q8TC90 406 aaPredicted RBP13.07□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms