RNA–Protein interactions for RNA: ENST00000617767.4

CPNE4-214, Transcript of copine 4, humanhuman

TSL 2 BASIC

Gene CPNE4, Length 3,556 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE4-214ENST00000617767 VPS8Q8N3P4 1428 aa8.16□□□□□ -1.1
CPNE4-214ENST00000617767 PRXQ9BXM0 1461 aa8.16□□□□□ -1.1
CPNE4-214ENST00000617767 PRDM2Q13029 1718 aa8.16□□□□□ -1.1
CPNE4-214ENST00000617767 ARAP1Q96P48 1450 aa8.15□□□□□ -1.11
CPNE4-214ENST00000617767 SALL2Q9Y467 1007 aaPredicted RBP8.14□□□□□ -1.11
CPNE4-214ENST00000617767 POLA1P09884 1462 aaPredicted RBP8.14□□□□□ -1.11
CPNE4-214ENST00000617767 TOPBP1Q92547 1522 aa8.14□□□□□ -1.11
CPNE4-214ENST00000617767 URB2Q14146 1524 aaKnown RBP8.12□□□□□ -1.11
CPNE4-214ENST00000617767 TSHZ2Q9NRE2 1034 aa8.12□□□□□ -1.11
CPNE4-214ENST00000617767 KIF21AQ7Z4S6 1674 aa8.12□□□□□ -1.11
CPNE4-214ENST00000617767 YTHDC1Q96MU7 727 aaKnown RBP8.11□□□□□ -1.11
CPNE4-214ENST00000617767 FBLN2P98095 1184 aa8.1□□□□□ -1.11
CPNE4-214ENST00000617767 PODXL2Q9NZ53 605 aa8.1□□□□□ -1.11
CPNE4-214ENST00000617767 ARHGAP35Q9NRY4 1499 aa8.1□□□□□ -1.11
CPNE4-214ENST00000617767 ERICH3Q5RHP9 1530 aa8.09□□□□□ -1.11
CPNE4-214ENST00000617767 DNMBPQ6XZF7 1577 aa8.09□□□□□ -1.11
CPNE4-214ENST00000617767 FHOD3Q2V2M9 1422 aa8.09□□□□□ -1.11
CPNE4-214ENST00000617767 PDS5BQ9NTI5 1447 aa8.09□□□□□ -1.11
CPNE4-214ENST00000617767 FAM50AQ14320 339 aaKnown RBP8.09□□□□□ -1.11
CPNE4-214ENST00000617767 PKNOX2Q96KN3 472 aa8.08□□□□□ -1.12
CPNE4-214ENST00000617767 AQRO60306 1485 aaKnown RBP eCLIP8.08□□□□□ -1.12
CPNE4-214ENST00000617767 DIEXFQ68CQ4 756 aaKnown RBP8.07□□□□□ -1.12
CPNE4-214ENST00000617767 LAMC3Q9Y6N6 1575 aa8.06□□□□□ -1.12
CPNE4-214ENST00000617767 ERCC6Q03468 1493 aa8.04□□□□□ -1.12
CPNE4-214ENST00000617767 GAPVD1Q14C86 1478 aa8.04□□□□□ -1.12
CPNE4-214ENST00000617767 ABCA10Q8WWZ4 1543 aa8.03□□□□□ -1.12
CPNE4-214ENST00000617767 ZBTB4Q9P1Z0 1013 aaPredicted RBP8.01□□□□□ -1.13
CPNE4-214ENST00000617767 ZNF608Q9ULD9 1512 aaPredicted RBP8.01□□□□□ -1.13
CPNE4-214ENST00000617767 PCF11O94913 1555 aaKnown RBP7.98□□□□□ -1.13
CPNE4-214ENST00000617767 PHLDB1Q86UU1 1377 aa7.97□□□□□ -1.13
CPNE4-214ENST00000617767 CCNB3Q8WWL7 1395 aa7.97□□□□□ -1.13
CPNE4-214ENST00000617767 SUPT16HQ9Y5B9 1047 aaKnown RBP7.96□□□□□ -1.13
CPNE4-214ENST00000617767 AEBP2Q6ZN18 517 aaPredicted RBP7.96□□□□□ -1.14
CPNE4-214ENST00000617767 CHIC2Q9UKJ5 165 aa7.96□□□□□ -1.14
CPNE4-214ENST00000617767 MRC2Q9UBG0 1479 aa7.96□□□□□ -1.14
CPNE4-214ENST00000617767 CHMP7Q8WUX9 453 aaPredicted RBP7.96□□□□□ -1.14
CPNE4-214ENST00000617767 MTUS2Q5JR59 1369 aa7.95□□□□□ -1.14
CPNE4-214ENST00000617767 CTTNBP2Q8WZ74 1663 aa7.94□□□□□ -1.14
CPNE4-214ENST00000617767 TIAM1Q13009 1591 aa7.94□□□□□ -1.14
CPNE4-214ENST00000617767 WDR97A6NE52 1622 aa7.94□□□□□ -1.14
CPNE4-214ENST00000617767 TARBP1Q13395 1621 aaKnown RBP7.94□□□□□ -1.14
CPNE4-214ENST00000617767 ABCA5Q8WWZ7 1642 aa7.94□□□□□ -1.14
CPNE4-214ENST00000617767 DEKP35659 375 aaKnown RBP7.94□□□□□ -1.14
CPNE4-214ENST00000617767 FHAD1B1AJZ9 1412 aa7.94□□□□□ -1.14
CPNE4-214ENST00000617767 LRRC9Q6ZRR7 1453 aa7.94□□□□□ -1.14
CPNE4-214ENST00000617767 CUL7Q14999 1698 aa7.94□□□□□ -1.14
CPNE4-214ENST00000617767 SIN3AQ96ST3 1273 aa7.92□□□□□ -1.14
CPNE4-214ENST00000617767 PBRM1Q86U86 1689 aa7.92□□□□□ -1.14
CPNE4-214ENST00000617767 ZNF316A6NFI3 1004 aaPredicted RBP7.91□□□□□ -1.14
CPNE4-214ENST00000617767 HIRIP3Q9BW71 556 aaPredicted RBP7.91□□□□□ -1.14
CPNE4-214ENST00000617767 SNAPC4Q5SXM2 1469 aa7.91□□□□□ -1.14
CPNE4-214ENST00000617767 DHX57Q6P158 1386 aaKnown RBP7.91□□□□□ -1.14
CPNE4-214ENST00000617767 RAB3GAP2Q9H2M9 1393 aa7.91□□□□□ -1.14
CPNE4-214ENST00000617767 RRP7BPQ9NSQ0 103 aa7.91□□□□□ -1.14
CPNE4-214ENST00000617767 ERICH6BQ5W0A0 696 aa7.9□□□□□ -1.15
CPNE4-214ENST00000617767 RRBP1Q9P2E9 1410 aaKnown RBP7.89□□□□□ -1.15
CPNE4-214ENST00000617767 ZNF777Q9ULD5 760 aaPredicted RBP7.89□□□□□ -1.15
CPNE4-214ENST00000617767 GRIN2BQ13224 1484 aa7.89□□□□□ -1.15
CPNE4-214ENST00000617767 FMN1Q68DA7 1419 aa7.89□□□□□ -1.15
CPNE4-214ENST00000617767 RTN4Q9NQC3 1192 aaKnown RBP7.88□□□□□ -1.15
CPNE4-214ENST00000617767 CDK13Q14004 1512 aaKnown RBP7.88□□□□□ -1.15
CPNE4-214ENST00000617767 CASKIN1Q8WXD9 1431 aa7.88□□□□□ -1.15
CPNE4-214ENST00000617767 MSH5O43196 834 aa7.87□□□□□ -1.15
CPNE4-214ENST00000617767 LRRIQ1Q96JM4 1722 aa7.87□□□□□ -1.15
CPNE4-214ENST00000617767 EIF4G3O43432 1585 aaKnown RBP7.87□□□□□ -1.15
CPNE4-214ENST00000617767 RBM19Q9Y4C8 960 aaKnown RBP7.86□□□□□ -1.15
CPNE4-214ENST00000617767 IFT140Q96RY7 1462 aa7.86□□□□□ -1.15
CPNE4-214ENST00000617767 FYCO1Q9BQS8 1478 aa7.86□□□□□ -1.15
CPNE4-214ENST00000617767 EFCAB5A4FU69 1503 aa7.86□□□□□ -1.15
CPNE4-214ENST00000617767 MIER1Q8N108 512 aa7.86□□□□□ -1.15
CPNE4-214ENST00000617767 TRIM52Q96A61 297 aa7.86□□□□□ -1.15
CPNE4-214ENST00000617767 ADAMTS12P58397 1594 aa7.86□□□□□ -1.15
CPNE4-214ENST00000617767 IQGAP2Q13576 1575 aa7.86□□□□□ -1.15
CPNE4-214ENST00000617767 ZNF644Q9H582 1327 aaPredicted RBP7.85□□□□□ -1.15
CPNE4-214ENST00000617767 WDR62O43379 1518 aa7.85□□□□□ -1.15
CPNE4-214ENST00000617767 CFAP43Q8NDM7 1665 aa7.84□□□□□ -1.15
CPNE4-214ENST00000617767 FOXD1Q16676 465 aa7.84□□□□□ -1.15
CPNE4-214ENST00000617767 SETD5Q9C0A6 1442 aa7.84□□□□□ -1.15
CPNE4-214ENST00000617767 JPH4Q96JJ6 628 aa7.84□□□□□ -1.16
CPNE4-214ENST00000617767 NCOA2Q15596 1464 aa7.83□□□□□ -1.16
CPNE4-214ENST00000617767 MAGI3Q5TCQ9 1506 aa7.83□□□□□ -1.16
CPNE4-214ENST00000617767 IL27Q8NEV9 243 aa7.82□□□□□ -1.16
CPNE4-214ENST00000617767 FGD6Q6ZV73 1430 aa7.82□□□□□ -1.16
CPNE4-214ENST00000617767 GRIN2AQ12879 1464 aa7.82□□□□□ -1.16
CPNE4-214ENST00000617767 SAMD9Q5K651 1589 aa7.82□□□□□ -1.16
CPNE4-214ENST00000617767 PTPRKQ15262 1439 aa7.82□□□□□ -1.16
CPNE4-214ENST00000617767 MYT1LQ9UL68 1186 aa7.82□□□□□ -1.16
CPNE4-214ENST00000617767 THOC2Q8NI27 1593 aaKnown RBP7.82□□□□□ -1.16
CPNE4-214ENST00000617767 PLB1Q6P1J6 1458 aa7.81□□□□□ -1.16
CPNE4-214ENST00000617767 BCANQ96GW7 911 aa7.8□□□□□ -1.16
CPNE4-214ENST00000617767 CLSPNQ9HAW4 1339 aa7.8□□□□□ -1.16
CPNE4-214ENST00000617767 A0A0U1RQG5 324 aaPredicted RBP7.8□□□□□ -1.16
CPNE4-214ENST00000617767 EPRSP07814 1512 aaKnown RBP7.79□□□□□ -1.16
CPNE4-214ENST00000617767 NEFLP07196 543 aa7.79□□□□□ -1.16
CPNE4-214ENST00000617767 PRG4Q92954 1404 aaPredicted RBP7.78□□□□□ -1.16
CPNE4-214ENST00000617767 MAP3K1Q13233 1512 aa7.78□□□□□ -1.16
CPNE4-214ENST00000617767 PDE4CQ08493 712 aa7.78□□□□□ -1.16
CPNE4-214ENST00000617767 CEP170Q5SW79 1584 aa7.78□□□□□ -1.16
CPNE4-214ENST00000617767 MYOM3Q5VTT5 1437 aa7.78□□□□□ -1.16
CPNE4-214ENST00000617767 DISP1Q96F81 1524 aa7.78□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms