RNA–Protein interactions for RNA: ENST00000616657.1

CNTNAP3P1-201, Transcript of contactin associated protein-like 3 pseudogene 1, humanhuman

BASIC

Gene CNTNAP3P1, Length 906 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNTNAP3P1-201ENST00000616657 POLA2Q14181 598 aa11.92□□□□□ -0.5
CNTNAP3P1-201ENST00000616657 TOPBP1Q92547 1522 aa11.91□□□□□ -0.5
CNTNAP3P1-201ENST00000616657 IFT140Q96RY7 1462 aa11.91□□□□□ -0.5
CNTNAP3P1-201ENST00000616657 OSCARQ8IYS5 282 aa11.91□□□□□ -0.5
CNTNAP3P1-201ENST00000616657 DNMBPQ6XZF7 1577 aa11.9□□□□□ -0.5
CNTNAP3P1-201ENST00000616657 CCDC88BA6NC98 1476 aa11.89□□□□□ -0.51
CNTNAP3P1-201ENST00000616657 ARHGEF11O15085 1522 aa11.88□□□□□ -0.51
CNTNAP3P1-201ENST00000616657 TARBP1Q13395 1621 aaKnown RBP11.84□□□□□ -0.51
CNTNAP3P1-201ENST00000616657 ABCC8Q09428 1581 aa11.83□□□□□ -0.52
CNTNAP3P1-201ENST00000616657 POLA1P09884 1462 aaPredicted RBP11.77□□□□□ -0.52
CNTNAP3P1-201ENST00000616657 AQRO60306 1485 aaKnown RBP eCLIP11.76□□□□□ -0.53
CNTNAP3P1-201ENST00000616657 PBRM1Q86U86 1689 aa11.75□□□□□ -0.53
CNTNAP3P1-201ENST00000616657 ARAP1Q96P48 1450 aa11.74□□□□□ -0.53
CNTNAP3P1-201ENST00000616657 WDR97A6NE52 1622 aa11.74□□□□□ -0.53
CNTNAP3P1-201ENST00000616657 RBM42Q9BTD8 480 aaKnown RBP11.72□□□□□ -0.53
CNTNAP3P1-201ENST00000616657 SNAPC4Q5SXM2 1469 aa11.71□□□□□ -0.53
CNTNAP3P1-201ENST00000616657 RAD54L2Q9Y4B4 1467 aa11.71□□□□□ -0.53
CNTNAP3P1-201ENST00000616657 FGD5Q6ZNL6 1462 aa11.7□□□□□ -0.54
CNTNAP3P1-201ENST00000616657 SUPT5HO00267 1087 aaKnown RBP11.7□□□□□ -0.54
CNTNAP3P1-201ENST00000616657 FBLN2P98095 1184 aa11.7□□□□□ -0.54
CNTNAP3P1-201ENST00000616657 SYNJ1O43426 1573 aa11.7□□□□□ -0.54
CNTNAP3P1-201ENST00000616657 CLASP1Q7Z460 1538 aa11.69□□□□□ -0.54
CNTNAP3P1-201ENST00000616657 CYB5RLQ6IPT4 315 aa11.68□□□□□ -0.54
CNTNAP3P1-201ENST00000616657 CUX1P39880 1505 aa11.67□□□□□ -0.54
CNTNAP3P1-201ENST00000616657 ZBTB12Q9Y330 459 aaPredicted RBP11.66□□□□□ -0.54
CNTNAP3P1-201ENST00000616657 SOGA1O94964 1423 aa11.65□□□□□ -0.54
CNTNAP3P1-201ENST00000616657 TDRD9Q8NDG6 1382 aaKnown RBP11.65□□□□□ -0.55
CNTNAP3P1-201ENST00000616657 MAGI1Q96QZ7 1491 aaPredicted RBP11.64□□□□□ -0.55
CNTNAP3P1-201ENST00000616657 ABCA5Q8WWZ7 1642 aa11.61□□□□□ -0.55
CNTNAP3P1-201ENST00000616657 GRIN2BQ13224 1484 aa11.61□□□□□ -0.55
CNTNAP3P1-201ENST00000616657 SYNJ2O15056 1496 aa11.6□□□□□ -0.55
CNTNAP3P1-201ENST00000616657 CHRDL2Q6WN34 429 aa11.56□□□□□ -0.56
CNTNAP3P1-201ENST00000616657 CHMP7Q8WUX9 453 aaPredicted RBP11.56□□□□□ -0.56
CNTNAP3P1-201ENST00000616657 GAPVD1Q14C86 1478 aa11.56□□□□□ -0.56
CNTNAP3P1-201ENST00000616657 ADAMTS12P58397 1594 aa11.55□□□□□ -0.56
CNTNAP3P1-201ENST00000616657 ABCA10Q8WWZ4 1543 aa11.52□□□□□ -0.57
CNTNAP3P1-201ENST00000616657 BIVM-ERCC5R4GMW8 1640 aa11.52□□□□□ -0.57
CNTNAP3P1-201ENST00000616657 CEP170Q5SW79 1584 aa11.5□□□□□ -0.57
CNTNAP3P1-201ENST00000616657 ERCC6L2Q5T890 1561 aa11.5□□□□□ -0.57
CNTNAP3P1-201ENST00000616657 SP7Q8TDD2 431 aaPredicted RBP11.49□□□□□ -0.57
CNTNAP3P1-201ENST00000616657 GRIN2AQ12879 1464 aa11.49□□□□□ -0.57
CNTNAP3P1-201ENST00000616657 AKT1S1Q96B36 256 aa11.48□□□□□ -0.57
CNTNAP3P1-201ENST00000616657 TOP2BQ02880 1626 aa11.47□□□□□ -0.57
CNTNAP3P1-201ENST00000616657 SHROOM2Q13796 1616 aa11.46□□□□□ -0.57
CNTNAP3P1-201ENST00000616657 KIF13AQ9H1H9 1805 aa11.46□□□□□ -0.58
CNTNAP3P1-201ENST00000616657 WRNQ14191 1432 aaPredicted RBP eCLIP11.43□□□□□ -0.58
CNTNAP3P1-201ENST00000616657 NUP160Q12769 1436 aa11.42□□□□□ -0.58
CNTNAP3P1-201ENST00000616657 FKBP8Q14318 412 aa11.41□□□□□ -0.58
CNTNAP3P1-201ENST00000616657 ERICH3Q5RHP9 1530 aa11.4□□□□□ -0.58
CNTNAP3P1-201ENST00000616657 RUSC2Q8N2Y8 1516 aa11.4□□□□□ -0.58
CNTNAP3P1-201ENST00000616657 MKRN4PQ13434 485 aaPredicted RBP11.4□□□□□ -0.58
CNTNAP3P1-201ENST00000616657 REM2Q8IYK8 340 aaPredicted RBP11.39□□□□□ -0.59
CNTNAP3P1-201ENST00000616657 FHAD1B1AJZ9 1412 aa11.38□□□□□ -0.59
CNTNAP3P1-201ENST00000616657 TSPOAP1O95153 1857 aa11.33□□□□□ -0.6
CNTNAP3P1-201ENST00000616657 SPDYE2BA6NHP3 402 aa11.32□□□□□ -0.6
CNTNAP3P1-201ENST00000616657 SPDYE6P0CI01 402 aa11.32□□□□□ -0.6
CNTNAP3P1-201ENST00000616657 SPDYE2Q495Y8 402 aa11.32□□□□□ -0.6
CNTNAP3P1-201ENST00000616657 PRG4Q92954 1404 aaPredicted RBP11.31□□□□□ -0.6
CNTNAP3P1-201ENST00000616657 ADCY10Q96PN6 1610 aa11.31□□□□□ -0.6
CNTNAP3P1-201ENST00000616657 CUL7Q14999 1698 aa11.3□□□□□ -0.6
CNTNAP3P1-201ENST00000616657 DIP2BQ9P265 1576 aa11.29□□□□□ -0.6
CNTNAP3P1-201ENST00000616657 PITPNM1O00562 1244 aa11.28□□□□□ -0.6
CNTNAP3P1-201ENST00000616657 MAPKBP1O60336 1514 aa11.26□□□□□ -0.61
CNTNAP3P1-201ENST00000616657 KDM6BO15054 1643 aa11.25□□□□□ -0.61
CNTNAP3P1-201ENST00000616657 ABCC10Q5T3U5 1492 aa11.22□□□□□ -0.61
CNTNAP3P1-201ENST00000616657 PIP4P2Q8N4L2 257 aa11.21□□□□□ -0.61
CNTNAP3P1-201ENST00000616657 ZNF692Q9BU19 519 aaPredicted RBP11.21□□□□□ -0.61
CNTNAP3P1-201ENST00000616657 SPDYE4A6NLX3 237 aa11.2□□□□□ -0.62
CNTNAP3P1-201ENST00000616657 SSUH2Q9Y2M2 353 aa11.2□□□□□ -0.62
CNTNAP3P1-201ENST00000616657 JPH4Q96JJ6 628 aa11.19□□□□□ -0.62
CNTNAP3P1-201ENST00000616657 KIAA0586Q9BVV6 1533 aa11.18□□□□□ -0.62
CNTNAP3P1-201ENST00000616657 KIF27Q86VH2 1401 aa11.18□□□□□ -0.62
CNTNAP3P1-201ENST00000616657 IQGAP2Q13576 1575 aa11.17□□□□□ -0.62
CNTNAP3P1-201ENST00000616657 FAM69CQ0P6D2 419 aa11.17□□□□□ -0.62
CNTNAP3P1-201ENST00000616657 NPM1P06748 294 aaKnown RBP eCLIP11.16□□□□□ -0.62
CNTNAP3P1-201ENST00000616657 PPRC1Q5VV67 1664 aaKnown RBP11.15□□□□□ -0.62
CNTNAP3P1-201ENST00000616657 FXR2P51116 673 aaKnown RBP eCLIP11.14□□□□□ -0.63
CNTNAP3P1-201ENST00000616657 TTBK1Q5TCY1 1321 aaPredicted RBP11.13□□□□□ -0.63
CNTNAP3P1-201ENST00000616657 CTTNBP2Q8WZ74 1663 aa11.12□□□□□ -0.63
CNTNAP3P1-201ENST00000616657 HAX1O00165 279 aa11.11□□□□□ -0.63
CNTNAP3P1-201ENST00000616657 FBXO3Q9UK99 471 aa11.11□□□□□ -0.63
CNTNAP3P1-201ENST00000616657 ABCC2Q92887 1545 aa11.1□□□□□ -0.63
CNTNAP3P1-201ENST00000616657 ZCCHC11Q5TAX3 1644 aaKnown RBP11.1□□□□□ -0.63
CNTNAP3P1-201ENST00000616657 SPDYE1Q8NFV5 336 aaPredicted RBP11.1□□□□□ -0.63
CNTNAP3P1-201ENST00000616657 IGF1RP08069 1367 aa11.1□□□□□ -0.63
CNTNAP3P1-201ENST00000616657 CARMIL2Q6F5E8 1435 aa11.09□□□□□ -0.63
CNTNAP3P1-201ENST00000616657 PROM2Q8N271 834 aa11.09□□□□□ -0.63
CNTNAP3P1-201ENST00000616657 CLEC11AQ9Y240 323 aa11.09□□□□□ -0.63
CNTNAP3P1-201ENST00000616657 PTPRGP23470 1445 aa11.09□□□□□ -0.63
CNTNAP3P1-201ENST00000616657 KIAA0556O60303 1618 aa11.08□□□□□ -0.64
CNTNAP3P1-201ENST00000616657 MAP3K4Q9Y6R4 1608 aa11.08□□□□□ -0.64
CNTNAP3P1-201ENST00000616657 ASXL2Q76L83 1435 aa11.07□□□□□ -0.64
CNTNAP3P1-201ENST00000616657 GLI2P10070 1586 aa11.07□□□□□ -0.64
CNTNAP3P1-201ENST00000616657 CARMIL1Q5VZK9 1371 aa11.06□□□□□ -0.64
CNTNAP3P1-201ENST00000616657 TNIKQ9UKE5 1360 aa11.06□□□□□ -0.64
CNTNAP3P1-201ENST00000616657 PLB1Q6P1J6 1458 aa11.05□□□□□ -0.64
CNTNAP3P1-201ENST00000616657 DISP1Q96F81 1524 aa11.04□□□□□ -0.64
CNTNAP3P1-201ENST00000616657 UHRF1BP1LA0JNW5 1464 aa11.03□□□□□ -0.64
CNTNAP3P1-201ENST00000616657 ADGRL1O94910 1474 aa11.03□□□□□ -0.64
CNTNAP3P1-201ENST00000616657 UGGT2Q9NYU1 1516 aa11.03□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms