RNA–Protein interactions for RNA: ENST00000616566.4

PGM3-215, Transcript of phosphoglucomutase 3, humanhuman

TSL 2 BASIC

Gene PGM3, Length 5,905 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PGM3-215ENST00000616566 CARMIL1Q5VZK9 1371 aa8.99□□□□□ -0.97
PGM3-215ENST00000616566 CUX1P39880 1505 aa8.99□□□□□ -0.97
PGM3-215ENST00000616566 IGF1RP08069 1367 aa8.96□□□□□ -0.98
PGM3-215ENST00000616566 TONSLQ96HA7 1378 aa8.96□□□□□ -0.98
PGM3-215ENST00000616566 BIVM-ERCC5R4GMW8 1640 aa8.95□□□□□ -0.98
PGM3-215ENST00000616566 PHLDB1Q86UU1 1377 aa8.95□□□□□ -0.98
PGM3-215ENST00000616566 NCAPD3P42695 1498 aa8.95□□□□□ -0.98
PGM3-215ENST00000616566 ANP32EQ9BTT0 268 aa8.94□□□□□ -0.98
PGM3-215ENST00000616566 FHAD1B1AJZ9 1412 aa8.93□□□□□ -0.98
PGM3-215ENST00000616566 PPP1R15AO75807 674 aaPredicted RBP8.92□□□□□ -0.98
PGM3-215ENST00000616566 CFTRP13569 1480 aa8.92□□□□□ -0.98
PGM3-215ENST00000616566 TIMELESSQ9UNS1 1208 aa8.92□□□□□ -0.98
PGM3-215ENST00000616566 LRRC9Q6ZRR7 1453 aa8.91□□□□□ -0.98
PGM3-215ENST00000616566 HNRNPUQ00839 825 aaKnown RBP eCLIP8.9□□□□□ -0.98
PGM3-215ENST00000616566 FHOD3Q2V2M9 1422 aa8.9□□□□□ -0.98
PGM3-215ENST00000616566 MTUS2Q5JR59 1369 aa8.9□□□□□ -0.98
PGM3-215ENST00000616566 CCER2I3L3R5 266 aa8.89□□□□□ -0.99
PGM3-215ENST00000616566 MAPKBP1O60336 1514 aa8.89□□□□□ -0.99
PGM3-215ENST00000616566 TIAM1Q13009 1591 aa8.89□□□□□ -0.99
PGM3-215ENST00000616566 HMGXB3Q12766 1538 aa8.89□□□□□ -0.99
PGM3-215ENST00000616566 WDR97A6NE52 1622 aa8.89□□□□□ -0.99
PGM3-215ENST00000616566 ERICH6Q7L0X2 663 aa8.89□□□□□ -0.99
PGM3-215ENST00000616566 CADPSQ9ULU8 1353 aa8.88□□□□□ -0.99
PGM3-215ENST00000616566 IRX6P78412 446 aaPredicted RBP8.88□□□□□ -0.99
PGM3-215ENST00000616566 FGD5Q6ZNL6 1462 aa8.88□□□□□ -0.99
PGM3-215ENST00000616566 CHIC2Q9UKJ5 165 aa8.87□□□□□ -0.99
PGM3-215ENST00000616566 RBM19Q9Y4C8 960 aaKnown RBP8.86□□□□□ -0.99
PGM3-215ENST00000616566 RRP7BPQ9NSQ0 103 aa8.85□□□□□ -0.99
PGM3-215ENST00000616566 ARID3CA6NKF2 412 aa8.85□□□□□ -0.99
PGM3-215ENST00000616566 CNGB1Q14028 1251 aaPredicted RBP8.85□□□□□ -0.99
PGM3-215ENST00000616566 CDK11AQ9UQ88 783 aaPredicted RBP8.84□□□□□ -0.99
PGM3-215ENST00000616566 MAP3K1Q13233 1512 aa8.83□□□□□ -1
PGM3-215ENST00000616566 POLR3GLQ9BT43 218 aa8.81□□□□□ -1
PGM3-215ENST00000616566 RAD54L2Q9Y4B4 1467 aa8.81□□□□□ -1
PGM3-215ENST00000616566 FAM9BQ8IZU0 186 aa8.81□□□□□ -1
PGM3-215ENST00000616566 CCDC18Q5T9S5 1454 aa8.81□□□□□ -1
PGM3-215ENST00000616566 FGD6Q6ZV73 1430 aa8.8□□□□□ -1
PGM3-215ENST00000616566 PCF11O94913 1555 aaKnown RBP8.8□□□□□ -1
PGM3-215ENST00000616566 EIF4G2P78344 907 aaKnown RBP eCLIP8.8□□□□□ -1
PGM3-215ENST00000616566 FMN1Q68DA7 1419 aa8.8□□□□□ -1
PGM3-215ENST00000616566 HSPA5P11021 654 aaKnown RBP8.79□□□□□ -1
PGM3-215ENST00000616566 CASKIN1Q8WXD9 1431 aa8.79□□□□□ -1
PGM3-215ENST00000616566 FANCD2Q9BXW9 1451 aa8.79□□□□□ -1
PGM3-215ENST00000616566 FYCO1Q9BQS8 1478 aa8.78□□□□□ -1
PGM3-215ENST00000616566 MRS2Q9HD23 443 aa8.78□□□□□ -1
PGM3-215ENST00000616566 TDRD9Q8NDG6 1382 aaKnown RBP8.77□□□□□ -1.01
PGM3-215ENST00000616566 UACAQ9BZF9 1416 aa8.77□□□□□ -1.01
PGM3-215ENST00000616566 FOXD1Q16676 465 aa8.76□□□□□ -1.01
PGM3-215ENST00000616566 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP8.75□□□□□ -1.01
PGM3-215ENST00000616566 ZNF326Q5BKZ1 582 aaKnown RBP8.75□□□□□ -1.01
PGM3-215ENST00000616566 HFM1A2PYH4 1435 aa8.74□□□□□ -1.01
PGM3-215ENST00000616566 WASHC2AQ641Q2 1341 aa8.73□□□□□ -1.01
PGM3-215ENST00000616566 MYOM3Q5VTT5 1437 aa8.73□□□□□ -1.01
PGM3-215ENST00000616566 L3MBTL2Q969R5 705 aa8.73□□□□□ -1.01
PGM3-215ENST00000616566 BCL11AQ9H165 835 aa8.73□□□□□ -1.01
PGM3-215ENST00000616566 PTPRKQ15262 1439 aa8.73□□□□□ -1.01
PGM3-215ENST00000616566 EFCAB5A4FU69 1503 aa8.73□□□□□ -1.01
PGM3-215ENST00000616566 NCOA2Q15596 1464 aa8.73□□□□□ -1.01
PGM3-215ENST00000616566 POLA1P09884 1462 aaPredicted RBP8.73□□□□□ -1.01
PGM3-215ENST00000616566 NAIPQ13075 1403 aa8.72□□□□□ -1.01
PGM3-215ENST00000616566 MPHOSPH9Q99550 1183 aa8.72□□□□□ -1.01
PGM3-215ENST00000616566 PPP4R2Q9NY27 417 aa8.72□□□□□ -1.01
PGM3-215ENST00000616566 B4GALNT3Q6L9W6 998 aa8.72□□□□□ -1.01
PGM3-215ENST00000616566 AQRO60306 1485 aaKnown RBP eCLIP8.71□□□□□ -1.029e-6■□□□□ 10.2
PGM3-215ENST00000616566 CFAP43Q8NDM7 1665 aa8.71□□□□□ -1.02
PGM3-215ENST00000616566 SLC4A1APQ9BWU0 796 aaKnown RBP8.71□□□□□ -1.02
PGM3-215ENST00000616566 ABCA10Q8WWZ4 1543 aa8.7□□□□□ -1.02
PGM3-215ENST00000616566 TOPBP1Q92547 1522 aa8.7□□□□□ -1.02
PGM3-215ENST00000616566 SENP3-EIF4A1A0A087X0R7 540 aa8.7□□□□□ -1.02
PGM3-215ENST00000616566 CCDC184Q52MB2 194 aa8.7□□□□□ -1.02
PGM3-215ENST00000616566 NESP48681 1621 aa8.69□□□□□ -1.02
PGM3-215ENST00000616566 PRKRIP1Q9H875 184 aaPredicted RBP8.69□□□□□ -1.02
PGM3-215ENST00000616566 ZNF777Q9ULD5 760 aaPredicted RBP8.68□□□□□ -1.02
PGM3-215ENST00000616566 DNMBPQ6XZF7 1577 aa8.68□□□□□ -1.02
PGM3-215ENST00000616566 MSH5O43196 834 aa8.68□□□□□ -1.02
PGM3-215ENST00000616566 PTPN23Q9H3S7 1636 aa8.68□□□□□ -1.02
PGM3-215ENST00000616566 ERICH6BQ5W0A0 696 aa8.67□□□□□ -1.02
PGM3-215ENST00000616566 CNTLNQ9NXG0 1405 aa8.66□□□□□ -1.02
PGM3-215ENST00000616566 FANCIQ9NVI1 1328 aa8.66□□□□□ -1.02
PGM3-215ENST00000616566 GAPVD1Q14C86 1478 aa8.66□□□□□ -1.02
PGM3-215ENST00000616566 C11orf95C9JLR9 678 aaPredicted RBP8.65□□□□□ -1.02
PGM3-215ENST00000616566 CCDC7Q96M83 1385 aa8.65□□□□□ -1.02
PGM3-215ENST00000616566 SNAPC4Q5SXM2 1469 aa8.65□□□□□ -1.02
PGM3-215ENST00000616566 CCDC136Q96JN2 1154 aa8.65□□□□□ -1.03
PGM3-215ENST00000616566 CC2D2AQ9P2K1 1620 aa8.64□□□□□ -1.03
PGM3-215ENST00000616566 NBPF8Q3BBV2 869 aa8.64□□□□□ -1.03
PGM3-215ENST00000616566 ZBED9Q6R2W3 1325 aa8.63□□□□□ -1.03
PGM3-215ENST00000616566 EHBP1L1Q8N3D4 1523 aa8.63□□□□□ -1.03
PGM3-215ENST00000616566 CUL7Q14999 1698 aa8.63□□□□□ -1.03
PGM3-215ENST00000616566 KIF7Q2M1P5 1343 aa8.63□□□□□ -1.03
PGM3-215ENST00000616566 TMC1Q8TDI8 760 aa8.62□□□□□ -1.03
PGM3-215ENST00000616566 NBR1Q14596 966 aa8.62□□□□□ -1.03
PGM3-215ENST00000616566 ZNF644Q9H582 1327 aaPredicted RBP8.62□□□□□ -1.03
PGM3-215ENST00000616566 PRDM2Q13029 1718 aa8.62□□□□□ -1.03
PGM3-215ENST00000616566 GRIN2BQ13224 1484 aa8.62□□□□□ -1.03
PGM3-215ENST00000616566 SUPT6HQ7KZ85 1726 aaKnown RBP8.61□□□□□ -1.03
PGM3-215ENST00000616566 CFDP1Q9UEE9 299 aaPredicted RBP8.61□□□□□ -1.03
PGM3-215ENST00000616566 ANP32AP39687 249 aaKnown RBP8.61□□□□□ -1.03
PGM3-215ENST00000616566 SALL2Q9Y467 1007 aaPredicted RBP8.6□□□□□ -1.03
PGM3-215ENST00000616566 KDM2AQ9Y2K7 1162 aa8.6□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms