RNA–Protein interactions for RNA: ENST00000616502.4

EPHB4-210, Transcript of EPH receptor B4, humanhuman

TSL 5 BASIC

Gene EPHB4, Length 3,737 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPHB4-210ENST00000616502 CADPSQ9ULU8 1353 aa20.16■□□□□ 0.82
EPHB4-210ENST00000616502 RAD54L2Q9Y4B4 1467 aa20.11■□□□□ 0.81
EPHB4-210ENST00000616502 SIN3AQ96ST3 1273 aa20.1■□□□□ 0.81
EPHB4-210ENST00000616502 CDK11AQ9UQ88 783 aaPredicted RBP20.1■□□□□ 0.81
EPHB4-210ENST00000616502 RRP7BPQ9NSQ0 103 aa20.07■□□□□ 0.8
EPHB4-210ENST00000616502 VPS8Q8N3P4 1428 aa20.07■□□□□ 0.8
EPHB4-210ENST00000616502 ZNF326Q5BKZ1 582 aaKnown RBP20.07■□□□□ 0.8
EPHB4-210ENST00000616502 RBM19Q9Y4C8 960 aaKnown RBP20.04■□□□□ 0.8
EPHB4-210ENST00000616502 NCAPD3P42695 1498 aa20.04■□□□□ 0.8
EPHB4-210ENST00000616502 HNRNPUQ00839 825 aaKnown RBP eCLIP20.04■□□□□ 0.8
EPHB4-210ENST00000616502 MYT1LQ9UL68 1186 aa20.03■□□□□ 0.8
EPHB4-210ENST00000616502 CHMP7Q8WUX9 453 aaPredicted RBP20■□□□□ 0.79
EPHB4-210ENST00000616502 DHX57Q6P158 1386 aaKnown RBP19.99■□□□□ 0.79
EPHB4-210ENST00000616502 FANCD2Q9BXW9 1451 aa19.98■□□□□ 0.79
EPHB4-210ENST00000616502 IGF1RP08069 1367 aa19.98■□□□□ 0.79
EPHB4-210ENST00000616502 MTUS2Q5JR59 1369 aa19.98■□□□□ 0.79
EPHB4-210ENST00000616502 FHOD3Q2V2M9 1422 aa19.97■□□□□ 0.79
EPHB4-210ENST00000616502 FGD5Q6ZNL6 1462 aa19.96■□□□□ 0.79
EPHB4-210ENST00000616502 CUX1P39880 1505 aa19.95■□□□□ 0.78
EPHB4-210ENST00000616502 CC2D2AQ9P2K1 1620 aa19.95■□□□□ 0.78
EPHB4-210ENST00000616502 SENP3-EIF4A1A0A087X0R7 540 aa19.9■□□□□ 0.78
EPHB4-210ENST00000616502 CFTRP13569 1480 aa19.88■□□□□ 0.77
EPHB4-210ENST00000616502 FOXD1Q16676 465 aa19.87■□□□□ 0.77
EPHB4-210ENST00000616502 ARAP1Q96P48 1450 aa19.86■□□□□ 0.77
EPHB4-210ENST00000616502 NBR1Q14596 966 aa19.85■□□□□ 0.77
EPHB4-210ENST00000616502 CCNB3Q8WWL7 1395 aa19.85■□□□□ 0.77
EPHB4-210ENST00000616502 FAM9BQ8IZU0 186 aa19.84■□□□□ 0.77
EPHB4-210ENST00000616502 KIF21BO75037 1637 aa19.83■□□□□ 0.77
EPHB4-210ENST00000616502 TONSLQ96HA7 1378 aa19.82■□□□□ 0.76
EPHB4-210ENST00000616502 ERCC6Q03468 1493 aa19.81■□□□□ 0.76
EPHB4-210ENST00000616502 SENP3Q9H4L4 574 aaPredicted RBP19.78■□□□□ 0.76
EPHB4-210ENST00000616502 AQRO60306 1485 aaKnown RBP eCLIP19.78■□□□□ 0.766e-7■■■■■ 31.1
EPHB4-210ENST00000616502 RAB3GAP2Q9H2M9 1393 aa19.77■□□□□ 0.76
EPHB4-210ENST00000616502 RTL5Q5HYW3 569 aaPredicted RBP19.77■□□□□ 0.76
EPHB4-210ENST00000616502 TOP2BQ02880 1626 aa19.75■□□□□ 0.75
EPHB4-210ENST00000616502 PEG3Q9GZU2 1588 aa19.72■□□□□ 0.75
EPHB4-210ENST00000616502 PDS5BQ9NTI5 1447 aa19.72■□□□□ 0.75
EPHB4-210ENST00000616502 GRWD1Q9BQ67 446 aaKnown RBP eCLIP19.72■□□□□ 0.754e-6■□□□□ 11.1
EPHB4-210ENST00000616502 PRXQ9BXM0 1461 aa19.7■□□□□ 0.74
EPHB4-210ENST00000616502 ARHGAP35Q9NRY4 1499 aa19.7■□□□□ 0.74
EPHB4-210ENST00000616502 B4GALNT3Q6L9W6 998 aa19.69■□□□□ 0.74
EPHB4-210ENST00000616502 KDM2AQ9Y2K7 1162 aa19.66■□□□□ 0.74
EPHB4-210ENST00000616502 HMGXB3Q12766 1538 aa19.66■□□□□ 0.74
EPHB4-210ENST00000616502 NPM2Q86SE8 214 aaKnown RBP19.65■□□□□ 0.74
EPHB4-210ENST00000616502 PHLDB1Q86UU1 1377 aa19.65■□□□□ 0.74
EPHB4-210ENST00000616502 POLA1P09884 1462 aaPredicted RBP19.64■□□□□ 0.74
EPHB4-210ENST00000616502 MRS2Q9HD23 443 aa19.64■□□□□ 0.73
EPHB4-210ENST00000616502 CCER2I3L3R5 266 aa19.63■□□□□ 0.73
EPHB4-210ENST00000616502 SETD5Q9C0A6 1442 aa19.61■□□□□ 0.73
EPHB4-210ENST00000616502 ZNF644Q9H582 1327 aaPredicted RBP19.6■□□□□ 0.73
EPHB4-210ENST00000616502 PPP1R15AO75807 674 aaPredicted RBP19.59■□□□□ 0.73
EPHB4-210ENST00000616502 TOPBP1Q92547 1522 aa19.59■□□□□ 0.73
EPHB4-210ENST00000616502 ANP32AP39687 249 aaKnown RBP19.59■□□□□ 0.73
EPHB4-210ENST00000616502 SLC4A1APQ9BWU0 796 aaKnown RBP19.59■□□□□ 0.73
EPHB4-210ENST00000616502 CFDP1Q9UEE9 299 aaPredicted RBP19.58■□□□□ 0.73
EPHB4-210ENST00000616502 FHAD1B1AJZ9 1412 aa19.57■□□□□ 0.72
EPHB4-210ENST00000616502 GAPVD1Q14C86 1478 aa19.57■□□□□ 0.72
EPHB4-210ENST00000616502 DEKP35659 375 aaKnown RBP19.57■□□□□ 0.72
EPHB4-210ENST00000616502 CCDC136Q96JN2 1154 aa19.54■□□□□ 0.72
EPHB4-210ENST00000616502 PPP4R2Q9NY27 417 aa19.54■□□□□ 0.72
EPHB4-210ENST00000616502 RGL3Q3MIN7 710 aa19.54■□□□□ 0.72
EPHB4-210ENST00000616502 MSH5O43196 834 aa19.53■□□□□ 0.72
EPHB4-210ENST00000616502 SALL2Q9Y467 1007 aaPredicted RBP19.51■□□□□ 0.71
EPHB4-210ENST00000616502 PLEKHD1A6NEE1 506 aa19.5■□□□□ 0.71
EPHB4-210ENST00000616502 EIF4G2P78344 907 aaKnown RBP eCLIP19.49■□□□□ 0.71
EPHB4-210ENST00000616502 ZBTB47Q9UFB7 747 aaPredicted RBP19.48■□□□□ 0.71
EPHB4-210ENST00000616502 JPH4Q96JJ6 628 aa19.48■□□□□ 0.71
EPHB4-210ENST00000616502 NOP58Q9Y2X3 529 aaKnown RBP19.45■□□□□ 0.7
EPHB4-210ENST00000616502 URB2Q14146 1524 aaKnown RBP19.45■□□□□ 0.7
EPHB4-210ENST00000616502 RTN4Q9NQC3 1192 aaKnown RBP19.45■□□□□ 0.7
EPHB4-210ENST00000616502 DAXXQ9UER7 740 aaPredicted RBP19.45■□□□□ 0.7
EPHB4-210ENST00000616502 TIMELESSQ9UNS1 1208 aa19.43■□□□□ 0.7
EPHB4-210ENST00000616502 TSPY4P0CV99 314 aa19.43■□□□□ 0.7
EPHB4-210ENST00000616502 TSPY10P0CW01 314 aa19.43■□□□□ 0.7
EPHB4-210ENST00000616502 HSPA5P11021 654 aaKnown RBP19.43■□□□□ 0.7
EPHB4-210ENST00000616502 HNRNPMP52272 730 aaKnown RBP eCLIP19.4■□□□□ 0.7
EPHB4-210ENST00000616502 FMN1Q68DA7 1419 aa19.4■□□□□ 0.7
EPHB4-210ENST00000616502 ERICH3Q5RHP9 1530 aa19.4■□□□□ 0.7
EPHB4-210ENST00000616502 RRBP1Q9P2E9 1410 aaKnown RBP19.39■□□□□ 0.69
EPHB4-210ENST00000616502 LRRC9Q6ZRR7 1453 aa19.39■□□□□ 0.69
EPHB4-210ENST00000616502 FANCIQ9NVI1 1328 aa19.38■□□□□ 0.69
EPHB4-210ENST00000616502 ZNF608Q9ULD9 1512 aaPredicted RBP19.38■□□□□ 0.69
EPHB4-210ENST00000616502 WDR97A6NE52 1622 aa19.37■□□□□ 0.69
EPHB4-210ENST00000616502 BIVM-ERCC5R4GMW8 1640 aa19.36■□□□□ 0.69
EPHB4-210ENST00000616502 CHGAP10645 457 aaKnown RBP19.35■□□□□ 0.69
EPHB4-210ENST00000616502 PLPPR3Q6T4P5 718 aa19.34■□□□□ 0.69
EPHB4-210ENST00000616502 MPHOSPH9Q99550 1183 aa19.33■□□□□ 0.69
EPHB4-210ENST00000616502 LAS1LQ9Y4W2 734 aaKnown RBP19.33■□□□□ 0.68
EPHB4-210ENST00000616502 TMC1Q8TDI8 760 aa19.32■□□□□ 0.68
EPHB4-210ENST00000616502 DNMBPQ6XZF7 1577 aa19.3■□□□□ 0.68
EPHB4-210ENST00000616502 L3MBTL2Q969R5 705 aa19.3■□□□□ 0.68
EPHB4-210ENST00000616502 CCDC184Q52MB2 194 aa19.28■□□□□ 0.68
EPHB4-210ENST00000616502 PKD2Q13563 968 aa19.28■□□□□ 0.68
EPHB4-210ENST00000616502 EIF5BO60841 1220 aaKnown RBP19.27■□□□□ 0.67
EPHB4-210ENST00000616502 ABCA10Q8WWZ4 1543 aa19.25■□□□□ 0.67
EPHB4-210ENST00000616502 FGD6Q6ZV73 1430 aa19.24■□□□□ 0.67
EPHB4-210ENST00000616502 PCF11O94913 1555 aaKnown RBP19.24■□□□□ 0.67
EPHB4-210ENST00000616502 PAK3O75914 559 aaPredicted RBP19.23■□□□□ 0.67
EPHB4-210ENST00000616502 CDK13Q14004 1512 aaKnown RBP19.23■□□□□ 0.67
EPHB4-210ENST00000616502 DCAF11Q8TEB1 546 aa19.21■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms