RNA–Protein interactions for RNA: ENST00000615468.4

TNFAIP3-208, Transcript of TNF alpha induced protein 3, humanhuman

TSL 5 BASIC

Gene TNFAIP3, Length 3,818 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFAIP3-208ENST00000615468 DHX57Q6P158 1386 aaKnown RBP14.41□□□□□ -0.1
TNFAIP3-208ENST00000615468 HNRNPUQ00839 825 aaKnown RBP eCLIP14.4□□□□□ -0.1
TNFAIP3-208ENST00000615468 GOLGA3Q08378 1498 aa14.4□□□□□ -0.1
TNFAIP3-208ENST00000615468 IL27Q8NEV9 243 aa14.39□□□□□ -0.11
TNFAIP3-208ENST00000615468 ERICH6BQ5W0A0 696 aa14.39□□□□□ -0.11
TNFAIP3-208ENST00000615468 CC2D2AQ9P2K1 1620 aa14.38□□□□□ -0.11
TNFAIP3-208ENST00000615468 CADPSQ9ULU8 1353 aa14.37□□□□□ -0.11
TNFAIP3-208ENST00000615468 RAPGEF2Q9Y4G8 1499 aa14.36□□□□□ -0.11
TNFAIP3-208ENST00000615468 EEA1Q15075 1411 aa14.36□□□□□ -0.11
TNFAIP3-208ENST00000615468 CLIP1P30622 1438 aa14.36□□□□□ -0.11
TNFAIP3-208ENST00000615468 NESP48681 1621 aa14.35□□□□□ -0.11
TNFAIP3-208ENST00000615468 PAK3O75914 559 aaPredicted RBP14.34□□□□□ -0.11
TNFAIP3-208ENST00000615468 B4GALNT3Q6L9W6 998 aa14.33□□□□□ -0.11
TNFAIP3-208ENST00000615468 CEP164Q9UPV0 1460 aa14.32□□□□□ -0.12
TNFAIP3-208ENST00000615468 HMGXB3Q12766 1538 aa14.31□□□□□ -0.12
TNFAIP3-208ENST00000615468 ANP32AP39687 249 aaKnown RBP14.31□□□□□ -0.12
TNFAIP3-208ENST00000615468 CUX2O14529 1486 aa14.3□□□□□ -0.12
TNFAIP3-208ENST00000615468 ZBTB47Q9UFB7 747 aaPredicted RBP14.29□□□□□ -0.12
TNFAIP3-208ENST00000615468 CFTRP13569 1480 aa14.29□□□□□ -0.12
TNFAIP3-208ENST00000615468 PPP4R2Q9NY27 417 aa14.29□□□□□ -0.12
TNFAIP3-208ENST00000615468 KIF27Q86VH2 1401 aa14.28□□□□□ -0.12
TNFAIP3-208ENST00000615468 CUX1P39880 1505 aa14.28□□□□□ -0.12
TNFAIP3-208ENST00000615468 CCER2I3L3R5 266 aa14.27□□□□□ -0.13
TNFAIP3-208ENST00000615468 UBE2Q2Q8WVN8 375 aa14.25□□□□□ -0.13
TNFAIP3-208ENST00000615468 ARID3CA6NKF2 412 aa14.24□□□□□ -0.13
TNFAIP3-208ENST00000615468 FANCD2Q9BXW9 1451 aa14.23□□□□□ -0.13
TNFAIP3-208ENST00000615468 NPM2Q86SE8 214 aaKnown RBP14.23□□□□□ -0.13
TNFAIP3-208ENST00000615468 SIN3AQ96ST3 1273 aa14.23□□□□□ -0.13
TNFAIP3-208ENST00000615468 RAD54L2Q9Y4B4 1467 aa14.21□□□□□ -0.13
TNFAIP3-208ENST00000615468 TDRD9Q8NDG6 1382 aaKnown RBP14.21□□□□□ -0.13
TNFAIP3-208ENST00000615468 VPS8Q8N3P4 1428 aa14.2□□□□□ -0.14
TNFAIP3-208ENST00000615468 TOP2BQ02880 1626 aa14.19□□□□□ -0.14
TNFAIP3-208ENST00000615468 PPP1R15AO75807 674 aaPredicted RBP14.19□□□□□ -0.14
TNFAIP3-208ENST00000615468 LAS1LQ9Y4W2 734 aaKnown RBP14.19□□□□□ -0.14
TNFAIP3-208ENST00000615468 FGD5Q6ZNL6 1462 aa14.19□□□□□ -0.14
TNFAIP3-208ENST00000615468 KANK4Q5T7N3 995 aaPredicted RBP14.18□□□□□ -0.14
TNFAIP3-208ENST00000615468 CARMIL1Q5VZK9 1371 aa14.17□□□□□ -0.14
TNFAIP3-208ENST00000615468 FBLN2P98095 1184 aa14.17□□□□□ -0.14
TNFAIP3-208ENST00000615468 IPO9Q96P70 1041 aaKnown RBP14.17□□□□□ -0.14
TNFAIP3-208ENST00000615468 NEFMP07197 916 aa14.16□□□□□ -0.14
TNFAIP3-208ENST00000615468 FAM9BQ8IZU0 186 aa14.14□□□□□ -0.15
TNFAIP3-208ENST00000615468 IGF1RP08069 1367 aa14.14□□□□□ -0.15
TNFAIP3-208ENST00000615468 FAM50AQ14320 339 aaKnown RBP14.11□□□□□ -0.15
TNFAIP3-208ENST00000615468 CNGB1Q14028 1251 aaPredicted RBP14.11□□□□□ -0.15
TNFAIP3-208ENST00000615468 BRPF3Q9ULD4 1205 aa14.08□□□□□ -0.16
TNFAIP3-208ENST00000615468 TIMELESSQ9UNS1 1208 aa14.06□□□□□ -0.16
TNFAIP3-208ENST00000615468 RAB3GAP2Q9H2M9 1393 aa14.06□□□□□ -0.16
TNFAIP3-208ENST00000615468 PRXQ9BXM0 1461 aa14.06□□□□□ -0.16
TNFAIP3-208ENST00000615468 KIF21BO75037 1637 aa14.05□□□□□ -0.16
TNFAIP3-208ENST00000615468 PDS5BQ9NTI5 1447 aa14.04□□□□□ -0.16
TNFAIP3-208ENST00000615468 PKNOX2Q96KN3 472 aa14.04□□□□□ -0.16
TNFAIP3-208ENST00000615468 BIVM-ERCC5R4GMW8 1640 aa14.03□□□□□ -0.16
TNFAIP3-208ENST00000615468 CCNB3Q8WWL7 1395 aa14.03□□□□□ -0.16
TNFAIP3-208ENST00000615468 POLA1P09884 1462 aaPredicted RBP14.02□□□□□ -0.16
TNFAIP3-208ENST00000615468 SENP3-EIF4A1A0A087X0R7 540 aa14.02□□□□□ -0.16
TNFAIP3-208ENST00000615468 WDR97A6NE52 1622 aa14.02□□□□□ -0.16
TNFAIP3-208ENST00000615468 TOPBP1Q92547 1522 aa14.02□□□□□ -0.16
TNFAIP3-208ENST00000615468 ARAP1Q96P48 1450 aa14.01□□□□□ -0.17
TNFAIP3-208ENST00000615468 MRS2Q9HD23 443 aa14□□□□□ -0.17
TNFAIP3-208ENST00000615468 TONSLQ96HA7 1378 aa13.98□□□□□ -0.17
TNFAIP3-208ENST00000615468 FHOD3Q2V2M9 1422 aa13.98□□□□□ -0.17
TNFAIP3-208ENST00000615468 DAXXQ9UER7 740 aaPredicted RBP13.98□□□□□ -0.17
TNFAIP3-208ENST00000615468 ERCC6Q03468 1493 aa13.97□□□□□ -0.17
TNFAIP3-208ENST00000615468 URB2Q14146 1524 aaKnown RBP13.96□□□□□ -0.17
TNFAIP3-208ENST00000615468 PPM1GO15355 546 aaPredicted RBP13.96□□□□□ -0.17
TNFAIP3-208ENST00000615468 AQRO60306 1485 aaKnown RBP eCLIP13.96□□□□□ -0.189e-7■■■■□ 24.2
TNFAIP3-208ENST00000615468 GLIPR1L2Q4G1C9 344 aa13.95□□□□□ -0.18
TNFAIP3-208ENST00000615468 USP35Q9P2H5 1018 aa13.94□□□□□ -0.18
TNFAIP3-208ENST00000615468 ARHGAP35Q9NRY4 1499 aa13.94□□□□□ -0.18
TNFAIP3-208ENST00000615468 CCDC184Q52MB2 194 aa13.94□□□□□ -0.18
TNFAIP3-208ENST00000615468 WASHC2AQ641Q2 1341 aa13.93□□□□□ -0.18
TNFAIP3-208ENST00000615468 GSE1Q14687 1217 aa13.92□□□□□ -0.18
TNFAIP3-208ENST00000615468 SETD5Q9C0A6 1442 aa13.91□□□□□ -0.18
TNFAIP3-208ENST00000615468 DNMBPQ6XZF7 1577 aa13.9□□□□□ -0.18
TNFAIP3-208ENST00000615468 ERICH3Q5RHP9 1530 aa13.9□□□□□ -0.18
TNFAIP3-208ENST00000615468 CHMP7Q8WUX9 453 aaPredicted RBP13.9□□□□□ -0.18
TNFAIP3-208ENST00000615468 VSIG10Q8N0Z9 540 aa13.89□□□□□ -0.19
TNFAIP3-208ENST00000615468 GAPVD1Q14C86 1478 aa13.89□□□□□ -0.19
TNFAIP3-208ENST00000615468 POLR3GLQ9BT43 218 aa13.88□□□□□ -0.19
TNFAIP3-208ENST00000615468 RSPH6AQ9H0K4 717 aa13.88□□□□□ -0.19
TNFAIP3-208ENST00000615468 RRBP1Q9P2E9 1410 aaKnown RBP13.88□□□□□ -0.19
TNFAIP3-208ENST00000615468 C11orf95C9JLR9 678 aaPredicted RBP13.88□□□□□ -0.19
TNFAIP3-208ENST00000615468 MAPKBP1O60336 1514 aa13.87□□□□□ -0.19
TNFAIP3-208ENST00000615468 CHIC2Q9UKJ5 165 aa13.85□□□□□ -0.19
TNFAIP3-208ENST00000615468 LAMC3Q9Y6N6 1575 aa13.85□□□□□ -0.19
TNFAIP3-208ENST00000615468 FRAT1Q92837 279 aaPredicted RBP13.85□□□□□ -0.19
TNFAIP3-208ENST00000615468 ZBED9Q6R2W3 1325 aa13.85□□□□□ -0.19
TNFAIP3-208ENST00000615468 WASHC2CQ9Y4E1 1318 aa13.84□□□□□ -0.19
TNFAIP3-208ENST00000615468 ABCA10Q8WWZ4 1543 aa13.84□□□□□ -0.19
TNFAIP3-208ENST00000615468 SLC4A3P48751 1232 aa13.84□□□□□ -0.19
TNFAIP3-208ENST00000615468 MTUS2Q5JR59 1369 aa13.83□□□□□ -0.19
TNFAIP3-208ENST00000615468 PDE4AP27815 886 aa13.83□□□□□ -0.2
TNFAIP3-208ENST00000615468 AKNAQ7Z591 1439 aa13.83□□□□□ -0.2
TNFAIP3-208ENST00000615468 HSPA5P11021 654 aaKnown RBP13.82□□□□□ -0.2
TNFAIP3-208ENST00000615468 NFKBIBQ15653 356 aa13.81□□□□□ -0.2
TNFAIP3-208ENST00000615468 ARXQ96QS3 562 aa13.8□□□□□ -0.2
TNFAIP3-208ENST00000615468 KIF21AQ7Z4S6 1674 aa13.79□□□□□ -0.2
TNFAIP3-208ENST00000615468 ZNF608Q9ULD9 1512 aaPredicted RBP13.79□□□□□ -0.2
TNFAIP3-208ENST00000615468 PRKRIP1Q9H875 184 aaPredicted RBP13.79□□□□□ -0.2
TNFAIP3-208ENST00000615468 EIF4G2P78344 907 aaKnown RBP eCLIP13.78□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 10 ms