RNA–Protein interactions for RNA: ENST00000614404.1

UBB-209, Transcript of ubiquitin B, humanhuman

APPRIS P1 TSL 3 BASIC

Gene UBB, Length 1,056 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBB-209ENST00000614404 RAPGEF2Q9Y4G8 1499 aa15.42■□□□□ 0.06
UBB-209ENST00000614404 ABCA10Q8WWZ4 1543 aa15.42■□□□□ 0.06
UBB-209ENST00000614404 UBTFP17480 764 aaKnown RBP15.41■□□□□ 0.06
UBB-209ENST00000614404 POTEDQ86YR6 584 aa15.41■□□□□ 0.06
UBB-209ENST00000614404 WDR97A6NE52 1622 aa15.39■□□□□ 0.05
UBB-209ENST00000614404 IGF1RP08069 1367 aa15.38■□□□□ 0.05
UBB-209ENST00000614404 ARHGEF11O15085 1522 aa15.37■□□□□ 0.05
UBB-209ENST00000614404 RAD54L2Q9Y4B4 1467 aa15.33■□□□□ 0.05
UBB-209ENST00000614404 GTF3C3Q9Y5Q9 886 aa15.33■□□□□ 0.04
UBB-209ENST00000614404 TARBP1Q13395 1621 aaKnown RBP15.3■□□□□ 0.04
UBB-209ENST00000614404 ZNF608Q9ULD9 1512 aaPredicted RBP15.3■□□□□ 0.04
UBB-209ENST00000614404 ABCA5Q8WWZ7 1642 aa15.29■□□□□ 0.04
UBB-209ENST00000614404 APLP2Q06481 763 aa15.27■□□□□ 0.04
UBB-209ENST00000614404 CARMIL1Q5VZK9 1371 aa15.24■□□□□ 0.03
UBB-209ENST00000614404 CUL7Q14999 1698 aa15.23■□□□□ 0.03
UBB-209ENST00000614404 ARAP1Q96P48 1450 aa15.22■□□□□ 0.03
UBB-209ENST00000614404 IFT140Q96RY7 1462 aa15.2■□□□□ 0.02
UBB-209ENST00000614404 RRBP1Q9P2E9 1410 aaKnown RBP15.18■□□□□ 0.02
UBB-209ENST00000614404 GAPVD1Q14C86 1478 aa15.17■□□□□ 0.02
UBB-209ENST00000614404 CYB5RLQ6IPT4 315 aa15.16■□□□□ 0.02
UBB-209ENST00000614404 MAP3K1Q13233 1512 aa15.16■□□□□ 0.02
UBB-209ENST00000614404 EIF4G3O43432 1585 aaKnown RBP15.15■□□□□ 0.02
UBB-209ENST00000614404 MSH5O43196 834 aa15.15■□□□□ 0.02
UBB-209ENST00000614404 TTBK1Q5TCY1 1321 aaPredicted RBP15.14■□□□□ 0.01
UBB-209ENST00000614404 TDRD9Q8NDG6 1382 aaKnown RBP15.13■□□□□ 0.01
UBB-209ENST00000614404 HNRNPUL2Q1KMD3 747 aaKnown RBP15.12■□□□□ 0.01
UBB-209ENST00000614404 ARHGAP35Q9NRY4 1499 aa15.12■□□□□ 0.01
UBB-209ENST00000614404 DHX57Q6P158 1386 aaKnown RBP15.11■□□□□ 0.01
UBB-209ENST00000614404 PBRM1Q86U86 1689 aa15.11■□□□□ 0.01
UBB-209ENST00000614404 MIER1Q8N108 512 aa15.09■□□□□ 0.01
UBB-209ENST00000614404 CHD1O14646 1710 aa15.09■□□□□ 0.01
UBB-209ENST00000614404 CTTNBP2Q8WZ74 1663 aa15.08■□□□□ 0
UBB-209ENST00000614404 AQRO60306 1485 aaKnown RBP eCLIP15.05■□□□□ -0
UBB-209ENST00000614404 ADAMTS12P58397 1594 aa15.04■□□□□ -0
UBB-209ENST00000614404 GRIN2BQ13224 1484 aa15.04■□□□□ -0
UBB-209ENST00000614404 TRHP20396 242 aaPredicted RBP15.04■□□□□ -0
UBB-209ENST00000614404 FHAD1B1AJZ9 1412 aa15.03■□□□□ -0
UBB-209ENST00000614404 EFCAB5A4FU69 1503 aa15.01□□□□□ -0.01
UBB-209ENST00000614404 CLASP1Q7Z460 1538 aa15.01□□□□□ -0.01
UBB-209ENST00000614404 CCNB3Q8WWL7 1395 aa15□□□□□ -0.01
UBB-209ENST00000614404 TIAM1Q13009 1591 aa14.98□□□□□ -0.01
UBB-209ENST00000614404 SAMD9Q5K651 1589 aa14.98□□□□□ -0.01
UBB-209ENST00000614404 CFAP43Q8NDM7 1665 aa14.97□□□□□ -0.01
UBB-209ENST00000614404 YTHDC1Q96MU7 727 aaKnown RBP14.95□□□□□ -0.02
UBB-209ENST00000614404 MAGI1Q96QZ7 1491 aaPredicted RBP14.92□□□□□ -0.02
UBB-209ENST00000614404 SNAPC4Q5SXM2 1469 aa14.9□□□□□ -0.02
UBB-209ENST00000614404 RANGAP1P46060 587 aaPredicted RBP14.9□□□□□ -0.02
UBB-209ENST00000614404 TIMELESSQ9UNS1 1208 aa14.9□□□□□ -0.02
UBB-209ENST00000614404 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP14.88□□□□□ -0.03
UBB-209ENST00000614404 UGGT2Q9NYU1 1516 aa14.87□□□□□ -0.03
UBB-209ENST00000614404 IQGAP2Q13576 1575 aa14.87□□□□□ -0.03
UBB-209ENST00000614404 GRIN2AQ12879 1464 aa14.87□□□□□ -0.03
UBB-209ENST00000614404 MAPKBP1O60336 1514 aa14.87□□□□□ -0.03
UBB-209ENST00000614404 FBLN2P98095 1184 aa14.86□□□□□ -0.03
UBB-209ENST00000614404 KANK4Q5T7N3 995 aaPredicted RBP14.86□□□□□ -0.03
UBB-209ENST00000614404 PCF11O94913 1555 aaKnown RBP14.85□□□□□ -0.03
UBB-209ENST00000614404 FHOD3Q2V2M9 1422 aa14.85□□□□□ -0.03
UBB-209ENST00000614404 CASKIN1Q8WXD9 1431 aa14.85□□□□□ -0.03
UBB-209ENST00000614404 LRRC9Q6ZRR7 1453 aa14.85□□□□□ -0.03
UBB-209ENST00000614404 FYCO1Q9BQS8 1478 aa14.85□□□□□ -0.03
UBB-209ENST00000614404 KIAA0586Q9BVV6 1533 aa14.85□□□□□ -0.03
UBB-209ENST00000614404 SETD5Q9C0A6 1442 aa14.84□□□□□ -0.03
UBB-209ENST00000614404 SYNJ2O15056 1496 aa14.84□□□□□ -0.03
UBB-209ENST00000614404 RAB3GAP2Q9H2M9 1393 aa14.82□□□□□ -0.04
UBB-209ENST00000614404 FMN1Q68DA7 1419 aa14.82□□□□□ -0.04
UBB-209ENST00000614404 PIAS4Q8N2W9 510 aaPredicted RBP14.81□□□□□ -0.04
UBB-209ENST00000614404 NUP160Q12769 1436 aa14.81□□□□□ -0.04
UBB-209ENST00000614404 SUPT16HQ9Y5B9 1047 aaKnown RBP14.8□□□□□ -0.04
UBB-209ENST00000614404 CEP170Q5SW79 1584 aa14.8□□□□□ -0.04
UBB-209ENST00000614404 LRRIQ1Q96JM4 1722 aa14.79□□□□□ -0.04
UBB-209ENST00000614404 DISP1Q96F81 1524 aa14.77□□□□□ -0.04
UBB-209ENST00000614404 P3H3Q8IVL6 736 aa14.76□□□□□ -0.05
UBB-209ENST00000614404 ERCC6L2Q5T890 1561 aa14.75□□□□□ -0.05
UBB-209ENST00000614404 KIAA0556O60303 1618 aa14.74□□□□□ -0.05
UBB-209ENST00000614404 CHMP7Q8WUX9 453 aaPredicted RBP14.71□□□□□ -0.05
UBB-209ENST00000614404 CCER2I3L3R5 266 aa14.7□□□□□ -0.06
UBB-209ENST00000614404 PHLDB1Q86UU1 1377 aa14.69□□□□□ -0.06
UBB-209ENST00000614404 HECW1Q76N89 1606 aa14.66□□□□□ -0.06
UBB-209ENST00000614404 CCDC18Q5T9S5 1454 aa14.65□□□□□ -0.06
UBB-209ENST00000614404 MAGI3Q5TCQ9 1506 aa14.63□□□□□ -0.07
UBB-209ENST00000614404 EPRSP07814 1512 aaKnown RBP14.62□□□□□ -0.07
UBB-209ENST00000614404 KIF13AQ9H1H9 1805 aa14.62□□□□□ -0.07
UBB-209ENST00000614404 SHROOM2Q13796 1616 aa14.62□□□□□ -0.07
UBB-209ENST00000614404 EHBP1L1Q8N3D4 1523 aa14.61□□□□□ -0.07
UBB-209ENST00000614404 FGD6Q6ZV73 1430 aa14.61□□□□□ -0.07
UBB-209ENST00000614404 JPH4Q96JJ6 628 aa14.61□□□□□ -0.07
UBB-209ENST00000614404 TSHZ2Q9NRE2 1034 aa14.61□□□□□ -0.07
UBB-209ENST00000614404 HFM1A2PYH4 1435 aa14.6□□□□□ -0.07
UBB-209ENST00000614404 UACAQ9BZF9 1416 aa14.6□□□□□ -0.07
UBB-209ENST00000614404 RAPGEF6Q8TEU7 1601 aa14.6□□□□□ -0.07
UBB-209ENST00000614404 PPP1R15AO75807 674 aaPredicted RBP14.6□□□□□ -0.07
UBB-209ENST00000614404 NUP153P49790 1475 aaKnown RBP14.59□□□□□ -0.07
UBB-209ENST00000614404 PLPPR3Q6T4P5 718 aa14.59□□□□□ -0.07
UBB-209ENST00000614404 PTPN23Q9H3S7 1636 aa14.59□□□□□ -0.07
UBB-209ENST00000614404 SUPT6HQ7KZ85 1726 aaKnown RBP14.58□□□□□ -0.08
UBB-209ENST00000614404 CARMIL2Q6F5E8 1435 aa14.57□□□□□ -0.08
UBB-209ENST00000614404 AKNAQ7Z591 1439 aa14.57□□□□□ -0.08
UBB-209ENST00000614404 ABCA8O94911 1581 aa14.56□□□□□ -0.08
UBB-209ENST00000614404 GCC2Q8IWJ2 1684 aa14.56□□□□□ -0.08
UBB-209ENST00000614404 NEFLP07196 543 aa14.56□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 60.2 ms