RNA–Protein interactions for RNA: ENST00000610417.4

SAMD4B-213, Transcript of sterile alpha motif domain containing 4B, humanhuman

APPRIS P3 TSL 2 BASIC

Gene SAMD4B, Length 3,664 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SAMD4B-213ENST00000610417 CENPBP07199 599 aaPredicted RBP15.78■□□□□ 0.12
SAMD4B-213ENST00000610417 CNGB1Q14028 1251 aaPredicted RBP15.78■□□□□ 0.12
SAMD4B-213ENST00000610417 MIER1Q8N108 512 aa15.77■□□□□ 0.11
SAMD4B-213ENST00000610417 THOC2Q8NI27 1593 aaKnown RBP15.76■□□□□ 0.11
SAMD4B-213ENST00000610417 CUX2O14529 1486 aa15.75■□□□□ 0.11
SAMD4B-213ENST00000610417 FBLN2P98095 1184 aa15.74■□□□□ 0.11
SAMD4B-213ENST00000610417 KIF27Q86VH2 1401 aa15.71■□□□□ 0.11
SAMD4B-213ENST00000610417 VPS8Q8N3P4 1428 aa15.7■□□□□ 0.1
SAMD4B-213ENST00000610417 URB2Q14146 1524 aaKnown RBP15.69■□□□□ 0.1
SAMD4B-213ENST00000610417 MRC2Q9UBG0 1479 aa15.69■□□□□ 0.1
SAMD4B-213ENST00000610417 ACIN1Q9UKV3 1341 aaKnown RBP15.67■□□□□ 0.1
SAMD4B-213ENST00000610417 CHIC2Q9UKJ5 165 aa15.66■□□□□ 0.1
SAMD4B-213ENST00000610417 WDR62O43379 1518 aa15.65■□□□□ 0.1
SAMD4B-213ENST00000610417 TDRD9Q8NDG6 1382 aaKnown RBP15.65■□□□□ 0.1
SAMD4B-213ENST00000610417 SIN3AQ96ST3 1273 aa15.64■□□□□ 0.09
SAMD4B-213ENST00000610417 CARMIL1Q5VZK9 1371 aa15.63■□□□□ 0.09
SAMD4B-213ENST00000610417 TOPBP1Q92547 1522 aa15.61■□□□□ 0.09
SAMD4B-213ENST00000610417 CUX1P39880 1505 aa15.6■□□□□ 0.09
SAMD4B-213ENST00000610417 RAD54L2Q9Y4B4 1467 aa15.6■□□□□ 0.09
SAMD4B-213ENST00000610417 DNMBPQ6XZF7 1577 aa15.59■□□□□ 0.09
SAMD4B-213ENST00000610417 TRIM52Q96A61 297 aa15.57■□□□□ 0.08
SAMD4B-213ENST00000610417 KIF21BO75037 1637 aa15.57■□□□□ 0.08
SAMD4B-213ENST00000610417 ARAP1Q96P48 1450 aa15.55■□□□□ 0.08
SAMD4B-213ENST00000610417 POLR3GLQ9BT43 218 aa15.54■□□□□ 0.08
SAMD4B-213ENST00000610417 IGF1RP08069 1367 aa15.54■□□□□ 0.08
SAMD4B-213ENST00000610417 FHOD3Q2V2M9 1422 aa15.52■□□□□ 0.08
SAMD4B-213ENST00000610417 DDX10Q13206 875 aaKnown RBP15.52■□□□□ 0.08
SAMD4B-213ENST00000610417 RRP7BPQ9NSQ0 103 aa15.52■□□□□ 0.07
SAMD4B-213ENST00000610417 BIVM-ERCC5R4GMW8 1640 aa15.51■□□□□ 0.07
SAMD4B-213ENST00000610417 FGD5Q6ZNL6 1462 aa15.51■□□□□ 0.07
SAMD4B-213ENST00000610417 TOP2BQ02880 1626 aa15.5■□□□□ 0.07
SAMD4B-213ENST00000610417 POLA1P09884 1462 aaPredicted RBP15.5■□□□□ 0.07
SAMD4B-213ENST00000610417 PODXL2Q9NZ53 605 aa15.5■□□□□ 0.07
SAMD4B-213ENST00000610417 BCANQ96GW7 911 aa15.5■□□□□ 0.07
SAMD4B-213ENST00000610417 ZNF777Q9ULD5 760 aaPredicted RBP15.48■□□□□ 0.07
SAMD4B-213ENST00000610417 CCNB3Q8WWL7 1395 aa15.47■□□□□ 0.07
SAMD4B-213ENST00000610417 TARBP1Q13395 1621 aaKnown RBP15.45■□□□□ 0.06
SAMD4B-213ENST00000610417 KCNH8Q96L42 1107 aa15.45■□□□□ 0.06
SAMD4B-213ENST00000610417 ZNF326Q5BKZ1 582 aaKnown RBP15.44■□□□□ 0.06
SAMD4B-213ENST00000610417 MTUS2Q5JR59 1369 aa15.43■□□□□ 0.06
SAMD4B-213ENST00000610417 SENP3-EIF4A1A0A087X0R7 540 aa15.43■□□□□ 0.06
SAMD4B-213ENST00000610417 PRXQ9BXM0 1461 aa15.43■□□□□ 0.06
SAMD4B-213ENST00000610417 ZNF608Q9ULD9 1512 aaPredicted RBP15.42■□□□□ 0.06
SAMD4B-213ENST00000610417 ARHGAP35Q9NRY4 1499 aa15.41■□□□□ 0.06
SAMD4B-213ENST00000610417 FOXD1Q16676 465 aa15.41■□□□□ 0.06
SAMD4B-213ENST00000610417 DHX57Q6P158 1386 aaKnown RBP15.41■□□□□ 0.06
SAMD4B-213ENST00000610417 IFT140Q96RY7 1462 aa15.4■□□□□ 0.06
SAMD4B-213ENST00000610417 RAB3GAP2Q9H2M9 1393 aa15.4■□□□□ 0.06
SAMD4B-213ENST00000610417 WDR97A6NE52 1622 aa15.39■□□□□ 0.05
SAMD4B-213ENST00000610417 PHLDB1Q86UU1 1377 aa15.36■□□□□ 0.05
SAMD4B-213ENST00000610417 AQRO60306 1485 aaKnown RBP eCLIP15.35■□□□□ 0.056e-7■■■■□ 25.9
SAMD4B-213ENST00000610417 EIF4G3O43432 1585 aaKnown RBP15.35■□□□□ 0.05
SAMD4B-213ENST00000610417 ANO8Q9HCE9 1232 aaPredicted RBP15.34■□□□□ 0.05
SAMD4B-213ENST00000610417 ANP32EQ9BTT0 268 aa15.33■□□□□ 0.04
SAMD4B-213ENST00000610417 ABCA10Q8WWZ4 1543 aa15.32■□□□□ 0.04
SAMD4B-213ENST00000610417 CHMP7Q8WUX9 453 aaPredicted RBP15.29■□□□□ 0.04
SAMD4B-213ENST00000610417 ABCA5Q8WWZ7 1642 aa15.28■□□□□ 0.04
SAMD4B-213ENST00000610417 PBRM1Q86U86 1689 aa15.26■□□□□ 0.03
SAMD4B-213ENST00000610417 TONSLQ96HA7 1378 aa15.26■□□□□ 0.03
SAMD4B-213ENST00000610417 AEBP2Q6ZN18 517 aaPredicted RBP15.25■□□□□ 0.03
SAMD4B-213ENST00000610417 GAPVD1Q14C86 1478 aa15.25■□□□□ 0.03
SAMD4B-213ENST00000610417 SETD5Q9C0A6 1442 aa15.22■□□□□ 0.03
SAMD4B-213ENST00000610417 PKNOX2Q96KN3 472 aa15.22■□□□□ 0.03
SAMD4B-213ENST00000610417 ERICH3Q5RHP9 1530 aa15.21■□□□□ 0.03
SAMD4B-213ENST00000610417 HOMEZQ8IX15 550 aa15.21■□□□□ 0.02
SAMD4B-213ENST00000610417 FHAD1B1AJZ9 1412 aa15.2■□□□□ 0.02
SAMD4B-213ENST00000610417 ZNF644Q9H582 1327 aaPredicted RBP15.19■□□□□ 0.02
SAMD4B-213ENST00000610417 PDIA4P13667 645 aaKnown RBP15.19■□□□□ 0.02
SAMD4B-213ENST00000610417 IRX6P78412 446 aaPredicted RBP15.19■□□□□ 0.02
SAMD4B-213ENST00000610417 AMER1Q5JTC6 1135 aaPredicted RBP15.19■□□□□ 0.02
SAMD4B-213ENST00000610417 MYT1LQ9UL68 1186 aa15.19■□□□□ 0.02
SAMD4B-213ENST00000610417 GRIN2BQ13224 1484 aa15.18■□□□□ 0.02
SAMD4B-213ENST00000610417 SNAPC4Q5SXM2 1469 aa15.18■□□□□ 0.02
SAMD4B-213ENST00000610417 ANP32CO43423 234 aa15.18■□□□□ 0.02
SAMD4B-213ENST00000610417 LRRC9Q6ZRR7 1453 aa15.16■□□□□ 0.02
SAMD4B-213ENST00000610417 CHD1O14646 1710 aa15.15■□□□□ 0.02
SAMD4B-213ENST00000610417 KDM2AQ9Y2K7 1162 aa15.15■□□□□ 0.02
SAMD4B-213ENST00000610417 TULP1O00294 542 aaPredicted RBP15.14■□□□□ 0.01
SAMD4B-213ENST00000610417 FKBP8Q14318 412 aa15.12■□□□□ 0.01
SAMD4B-213ENST00000610417 GRWD1Q9BQ67 446 aaKnown RBP eCLIP15.12■□□□□ 0.01
SAMD4B-213ENST00000610417 SLC4A1APQ9BWU0 796 aaKnown RBP15.12■□□□□ 0.01
SAMD4B-213ENST00000610417 RRBP1Q9P2E9 1410 aaKnown RBP15.12■□□□□ 0.01
SAMD4B-213ENST00000610417 SENP3Q9H4L4 574 aaPredicted RBP15.11■□□□□ 0.01
SAMD4B-213ENST00000610417 MAGI1Q96QZ7 1491 aaPredicted RBP15.11■□□□□ 0.01
SAMD4B-213ENST00000610417 ADAMTS12P58397 1594 aa15.1■□□□□ 0.01
SAMD4B-213ENST00000610417 FAM9BQ8IZU0 186 aa15.1■□□□□ 0.01
SAMD4B-213ENST00000610417 NEFLP07196 543 aa15.08■□□□□ 0.01
SAMD4B-213ENST00000610417 PCF11O94913 1555 aaKnown RBP15.08■□□□□ 0
SAMD4B-213ENST00000610417 CFDP1Q9UEE9 299 aaPredicted RBP15.08■□□□□ 0
SAMD4B-213ENST00000610417 PPP1R15AO75807 674 aaPredicted RBP15.07■□□□□ 0
SAMD4B-213ENST00000610417 SYNJ2O15056 1496 aa15.07■□□□□ 0
SAMD4B-213ENST00000610417 HNRNPUQ00839 825 aaKnown RBP eCLIP15.07■□□□□ 0
SAMD4B-213ENST00000610417 TIAM1Q13009 1591 aa15.07■□□□□ 0
SAMD4B-213ENST00000610417 FMN1Q68DA7 1419 aa15.06■□□□□ 0
SAMD4B-213ENST00000610417 CLSPNQ9HAW4 1339 aa15.05■□□□□ -0
SAMD4B-213ENST00000610417 CUL7Q14999 1698 aa15.05■□□□□ -0
SAMD4B-213ENST00000610417 CDK11AQ9UQ88 783 aaPredicted RBP15.04■□□□□ -0
SAMD4B-213ENST00000610417 SALL2Q9Y467 1007 aaPredicted RBP15.04■□□□□ -0
SAMD4B-213ENST00000610417 RGL3Q3MIN7 710 aa15.03■□□□□ -0
SAMD4B-213ENST00000610417 GRIN2AQ12879 1464 aa15.02□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 56.5 ms