RNA–Protein interactions for RNA: ENST00000609203.1

CLCN3P1-202, Transcript of chloride voltage-gated channel 3 pseudogene 1, humanhuman

TSL 2 BASIC

Gene CLCN3P1, Length 1,944 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3P1-202ENST00000609203 EIF5BO60841 1220 aaKnown RBP12.78□□□□□ -0.36
CLCN3P1-202ENST00000609203 PCGF6Q9BYE7 350 aa12.78□□□□□ -0.36
CLCN3P1-202ENST00000609203 ABCA5Q8WWZ7 1642 aa12.78□□□□□ -0.36
CLCN3P1-202ENST00000609203 EIF4G3O43432 1585 aaKnown RBP12.78□□□□□ -0.36
CLCN3P1-202ENST00000609203 HOMEZQ8IX15 550 aa12.76□□□□□ -0.37
CLCN3P1-202ENST00000609203 TNIKQ9UKE5 1360 aa12.74□□□□□ -0.37
CLCN3P1-202ENST00000609203 TULP1O00294 542 aaPredicted RBP12.74□□□□□ -0.37
CLCN3P1-202ENST00000609203 UBTFP17480 764 aaKnown RBP12.73□□□□□ -0.37
CLCN3P1-202ENST00000609203 GAPVD1Q14C86 1478 aa12.73□□□□□ -0.37
CLCN3P1-202ENST00000609203 CEP162Q5TB80 1403 aa12.72□□□□□ -0.37
CLCN3P1-202ENST00000609203 KIF27Q86VH2 1401 aa12.71□□□□□ -0.37
CLCN3P1-202ENST00000609203 TRIM26Q12899 539 aaPredicted RBP12.71□□□□□ -0.37
CLCN3P1-202ENST00000609203 IGF1RP08069 1367 aa12.71□□□□□ -0.38
CLCN3P1-202ENST00000609203 PBRM1Q86U86 1689 aa12.71□□□□□ -0.38
CLCN3P1-202ENST00000609203 TAOK2Q9UL54 1235 aa12.7□□□□□ -0.38
CLCN3P1-202ENST00000609203 SNAPC4Q5SXM2 1469 aa12.65□□□□□ -0.38
CLCN3P1-202ENST00000609203 ERICH3Q5RHP9 1530 aa12.65□□□□□ -0.38
CLCN3P1-202ENST00000609203 GRIN2BQ13224 1484 aa12.65□□□□□ -0.38
CLCN3P1-202ENST00000609203 RAPGEF2Q9Y4G8 1499 aa12.65□□□□□ -0.38
CLCN3P1-202ENST00000609203 KLHL34Q8N239 644 aa12.64□□□□□ -0.39
CLCN3P1-202ENST00000609203 PRXQ9BXM0 1461 aa12.62□□□□□ -0.39
CLCN3P1-202ENST00000609203 ADAMTS12P58397 1594 aa12.62□□□□□ -0.39
CLCN3P1-202ENST00000609203 CARMIL1Q5VZK9 1371 aa12.59□□□□□ -0.39
CLCN3P1-202ENST00000609203 CLIP1P30622 1438 aa12.58□□□□□ -0.4
CLCN3P1-202ENST00000609203 CUL7Q14999 1698 aa12.57□□□□□ -0.4
CLCN3P1-202ENST00000609203 MAGI1Q96QZ7 1491 aaPredicted RBP12.57□□□□□ -0.4
CLCN3P1-202ENST00000609203 CHD1O14646 1710 aa12.57□□□□□ -0.4
CLCN3P1-202ENST00000609203 HRCP23327 699 aa12.56□□□□□ -0.4
CLCN3P1-202ENST00000609203 FHAD1B1AJZ9 1412 aa12.56□□□□□ -0.4
CLCN3P1-202ENST00000609203 PPARGC1BQ86YN6 1023 aaKnown RBP12.55□□□□□ -0.4
CLCN3P1-202ENST00000609203 SYNJ2O15056 1496 aa12.54□□□□□ -0.4
CLCN3P1-202ENST00000609203 GRIN2AQ12879 1464 aa12.53□□□□□ -0.4
CLCN3P1-202ENST00000609203 FBLN2P98095 1184 aa12.52□□□□□ -0.4
CLCN3P1-202ENST00000609203 CEP170Q5SW79 1584 aa12.51□□□□□ -0.41
CLCN3P1-202ENST00000609203 BCANQ96GW7 911 aa12.5□□□□□ -0.41
CLCN3P1-202ENST00000609203 VPS8Q8N3P4 1428 aa12.49□□□□□ -0.41
CLCN3P1-202ENST00000609203 CHMP7Q8WUX9 453 aaPredicted RBP12.49□□□□□ -0.41
CLCN3P1-202ENST00000609203 PODXL2Q9NZ53 605 aa12.49□□□□□ -0.41
CLCN3P1-202ENST00000609203 PPP4R3CPQ6ZMV5 832 aa12.47□□□□□ -0.41
CLCN3P1-202ENST00000609203 NUP160Q12769 1436 aa12.46□□□□□ -0.41
CLCN3P1-202ENST00000609203 TPRNQ4KMQ1 711 aa12.45□□□□□ -0.42
CLCN3P1-202ENST00000609203 CTTNBP2Q8WZ74 1663 aa12.43□□□□□ -0.42
CLCN3P1-202ENST00000609203 ARAP1Q96P48 1450 aa12.42□□□□□ -0.42
CLCN3P1-202ENST00000609203 CLASP1Q7Z460 1538 aa12.42□□□□□ -0.42
CLCN3P1-202ENST00000609203 SCAF1Q9H7N4 1312 aaKnown RBP12.41□□□□□ -0.42
CLCN3P1-202ENST00000609203 KIAA0586Q9BVV6 1533 aa12.39□□□□□ -0.43
CLCN3P1-202ENST00000609203 ERCC6L2Q5T890 1561 aa12.39□□□□□ -0.43
CLCN3P1-202ENST00000609203 IQGAP2Q13576 1575 aa12.38□□□□□ -0.43
CLCN3P1-202ENST00000609203 ARHGAP35Q9NRY4 1499 aa12.38□□□□□ -0.43
CLCN3P1-202ENST00000609203 OSCARQ8IYS5 282 aa12.36□□□□□ -0.43
CLCN3P1-202ENST00000609203 SHROOM2Q13796 1616 aa12.35□□□□□ -0.43
CLCN3P1-202ENST00000609203 DISP1Q96F81 1524 aa12.34□□□□□ -0.43
CLCN3P1-202ENST00000609203 JPH4Q96JJ6 628 aa12.33□□□□□ -0.44
CLCN3P1-202ENST00000609203 GTF3C3Q9Y5Q9 886 aa12.33□□□□□ -0.44
CLCN3P1-202ENST00000609203 PLEKHG5O94827 1062 aa12.32□□□□□ -0.44
CLCN3P1-202ENST00000609203 ZEB1P37275 1124 aaPredicted RBP12.32□□□□□ -0.44
CLCN3P1-202ENST00000609203 SAMD9Q5K651 1589 aa12.32□□□□□ -0.44
CLCN3P1-202ENST00000609203 UGGT2Q9NYU1 1516 aa12.32□□□□□ -0.44
CLCN3P1-202ENST00000609203 P3H3Q8IVL6 736 aa12.31□□□□□ -0.44
CLCN3P1-202ENST00000609203 EFCAB5A4FU69 1503 aa12.3□□□□□ -0.44
CLCN3P1-202ENST00000609203 PRG4Q92954 1404 aaPredicted RBP12.29□□□□□ -0.44
CLCN3P1-202ENST00000609203 KIAA0556O60303 1618 aa12.28□□□□□ -0.44
CLCN3P1-202ENST00000609203 FHOD3Q2V2M9 1422 aa12.28□□□□□ -0.44
CLCN3P1-202ENST00000609203 NPM2Q86SE8 214 aaKnown RBP12.25□□□□□ -0.45
CLCN3P1-202ENST00000609203 PCF11O94913 1555 aaKnown RBP12.25□□□□□ -0.45
CLCN3P1-202ENST00000609203 CFAP43Q8NDM7 1665 aa12.24□□□□□ -0.45
CLCN3P1-202ENST00000609203 TIAM1Q13009 1591 aa12.24□□□□□ -0.45
CLCN3P1-202ENST00000609203 ARHGEF11O15085 1522 aa12.23□□□□□ -0.45
CLCN3P1-202ENST00000609203 MAP3K1Q13233 1512 aa12.22□□□□□ -0.45
CLCN3P1-202ENST00000609203 PLCB2Q00722 1185 aa12.21□□□□□ -0.45
CLCN3P1-202ENST00000609203 CCER1Q8TC90 406 aaPredicted RBP12.21□□□□□ -0.45
CLCN3P1-202ENST00000609203 RIMBP3CA6NJZ7 1639 aa12.21□□□□□ -0.45
CLCN3P1-202ENST00000609203 RIMBP3BA6NNM3 1639 aa12.21□□□□□ -0.45
CLCN3P1-202ENST00000609203 RIMBP3Q9UFD9 1639 aa12.21□□□□□ -0.45
CLCN3P1-202ENST00000609203 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP12.21□□□□□ -0.46
CLCN3P1-202ENST00000609203 BCL11AQ9H165 835 aa12.21□□□□□ -0.46
CLCN3P1-202ENST00000609203 KANK4Q5T7N3 995 aaPredicted RBP12.2□□□□□ -0.46
CLCN3P1-202ENST00000609203 FYCO1Q9BQS8 1478 aa12.19□□□□□ -0.46
CLCN3P1-202ENST00000609203 PLB1Q6P1J6 1458 aa12.18□□□□□ -0.46
CLCN3P1-202ENST00000609203 LRRIQ1Q96JM4 1722 aa12.18□□□□□ -0.46
CLCN3P1-202ENST00000609203 HNRNPUL2Q1KMD3 747 aaKnown RBP12.17□□□□□ -0.46
CLCN3P1-202ENST00000609203 FMN1Q68DA7 1419 aa12.17□□□□□ -0.46
CLCN3P1-202ENST00000609203 CARMIL2Q6F5E8 1435 aa12.17□□□□□ -0.46
CLCN3P1-202ENST00000609203 MAPK8IP2Q13387 824 aaPredicted RBP12.16□□□□□ -0.46
CLCN3P1-202ENST00000609203 CASKIN1Q8WXD9 1431 aa12.15□□□□□ -0.46
CLCN3P1-202ENST00000609203 ATP1B4Q9UN42 357 aaPredicted RBP12.15□□□□□ -0.46
CLCN3P1-202ENST00000609203 CNKSR2Q8WXI2 1034 aa12.15□□□□□ -0.46
CLCN3P1-202ENST00000609203 LRRC9Q6ZRR7 1453 aa12.14□□□□□ -0.47
CLCN3P1-202ENST00000609203 PTPRGP23470 1445 aa12.14□□□□□ -0.47
CLCN3P1-202ENST00000609203 DNAJC5Q9H3Z4 198 aa12.14□□□□□ -0.47
CLCN3P1-202ENST00000609203 RRBP1Q9P2E9 1410 aaKnown RBP12.13□□□□□ -0.47
CLCN3P1-202ENST00000609203 ABCA8O94911 1581 aa12.13□□□□□ -0.47
CLCN3P1-202ENST00000609203 ADCY10Q96PN6 1610 aa12.12□□□□□ -0.47
CLCN3P1-202ENST00000609203 NUP153P49790 1475 aaKnown RBP12.11□□□□□ -0.47
CLCN3P1-202ENST00000609203 ARID3CA6NKF2 412 aa12.11□□□□□ -0.47
CLCN3P1-202ENST00000609203 FBXO3Q9UK99 471 aa12.11□□□□□ -0.47
CLCN3P1-202ENST00000609203 RAPGEF6Q8TEU7 1601 aa12.1□□□□□ -0.47
CLCN3P1-202ENST00000609203 CYB5RLQ6IPT4 315 aa12.1□□□□□ -0.47
CLCN3P1-202ENST00000609203 CCNB3Q8WWL7 1395 aa12.09□□□□□ -0.47
CLCN3P1-202ENST00000609203 DMRT2Q9Y5R5 561 aa12.09□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms