RNA–Protein interactions for RNA: ENST00000608624.5

LINC00343-212, long intergenic non-protein coding RNA 343, humanhuman

TSL 5

Gene LINC00343, Length 774 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00343-212ENST00000608624 TRIM41Q8WV44 630 aa15.4■□□□□ 0.06
LINC00343-212ENST00000608624 GRIN2BQ13224 1484 aa15.39■□□□□ 0.05
LINC00343-212ENST00000608624 CAPN15O75808 1086 aa15.38■□□□□ 0.05
LINC00343-212ENST00000608624 CHD1O14646 1710 aa15.35■□□□□ 0.05
LINC00343-212ENST00000608624 ADAMTS12P58397 1594 aa15.34■□□□□ 0.05
LINC00343-212ENST00000608624 KIF27Q86VH2 1401 aa15.33■□□□□ 0.04
LINC00343-212ENST00000608624 NPM3O75607 178 aaKnown RBP15.32■□□□□ 0.04
LINC00343-212ENST00000608624 MAGI1Q96QZ7 1491 aaPredicted RBP15.32■□□□□ 0.04
LINC00343-212ENST00000608624 ERICH3Q5RHP9 1530 aa15.31■□□□□ 0.04
LINC00343-212ENST00000608624 IGF1RP08069 1367 aa15.28■□□□□ 0.04
LINC00343-212ENST00000608624 SYNJ2O15056 1496 aa15.27■□□□□ 0.04
LINC00343-212ENST00000608624 FBLN2P98095 1184 aa15.26■□□□□ 0.03
LINC00343-212ENST00000608624 FHAD1B1AJZ9 1412 aa15.24■□□□□ 0.03
LINC00343-212ENST00000608624 GRIN2AQ12879 1464 aa15.22■□□□□ 0.03
LINC00343-212ENST00000608624 CUL7Q14999 1698 aa15.22■□□□□ 0.03
LINC00343-212ENST00000608624 CEP170Q5SW79 1584 aa15.2■□□□□ 0.02
LINC00343-212ENST00000608624 FAM9AQ8IZU1 332 aaPredicted RBP15.2■□□□□ 0.02
LINC00343-212ENST00000608624 CHMP7Q8WUX9 453 aaPredicted RBP15.2■□□□□ 0.02
LINC00343-212ENST00000608624 CARMIL1Q5VZK9 1371 aa15.17■□□□□ 0.02
LINC00343-212ENST00000608624 CLASP1Q7Z460 1538 aa15.17■□□□□ 0.02
LINC00343-212ENST00000608624 OSCARQ8IYS5 282 aa15.15■□□□□ 0.02
LINC00343-212ENST00000608624 NUP160Q12769 1436 aa15.15■□□□□ 0.02
LINC00343-212ENST00000608624 PRXQ9BXM0 1461 aa15.14■□□□□ 0.01
LINC00343-212ENST00000608624 DNAJC5Q9H3Z4 198 aa15.12■□□□□ 0.01
LINC00343-212ENST00000608624 RAPGEF2Q9Y4G8 1499 aa15.1■□□□□ 0.01
LINC00343-212ENST00000608624 EEA1Q15075 1411 aa15.09■□□□□ 0.01
LINC00343-212ENST00000608624 CSRNP3Q8WYN3 585 aa15.09■□□□□ 0.01
LINC00343-212ENST00000608624 ERCC6L2Q5T890 1561 aa15.07■□□□□ 0
LINC00343-212ENST00000608624 EHMT2Q96KQ7 1210 aa15.05■□□□□ -0
LINC00343-212ENST00000608624 KIF21BO75037 1637 aa15.04■□□□□ -0
LINC00343-212ENST00000608624 RIMBP3CA6NJZ7 1639 aa15.03■□□□□ -0
LINC00343-212ENST00000608624 RIMBP3BA6NNM3 1639 aa15.03■□□□□ -0
LINC00343-212ENST00000608624 SHROOM2Q13796 1616 aa15.03■□□□□ -0
LINC00343-212ENST00000608624 RIMBP3Q9UFD9 1639 aa15.03■□□□□ -0
LINC00343-212ENST00000608624 ARHGEF11O15085 1522 aa15.03■□□□□ -0
LINC00343-212ENST00000608624 ABCB7O75027 752 aa15.01□□□□□ -0.01
LINC00343-212ENST00000608624 KIAA0586Q9BVV6 1533 aa15.01□□□□□ -0.01
LINC00343-212ENST00000608624 CTTNBP2Q8WZ74 1663 aa15□□□□□ -0.01
LINC00343-212ENST00000608624 IQGAP2Q13576 1575 aa14.99□□□□□ -0.01
LINC00343-212ENST00000608624 ARAP1Q96P48 1450 aa14.96□□□□□ -0.01
LINC00343-212ENST00000608624 TRHP20396 242 aaPredicted RBP14.96□□□□□ -0.01
LINC00343-212ENST00000608624 PRG4Q92954 1404 aaPredicted RBP14.95□□□□□ -0.02
LINC00343-212ENST00000608624 GOLGA3Q08378 1498 aa14.94□□□□□ -0.02
LINC00343-212ENST00000608624 JPH4Q96JJ6 628 aa14.92□□□□□ -0.02
LINC00343-212ENST00000608624 DISP1Q96F81 1524 aa14.92□□□□□ -0.02
LINC00343-212ENST00000608624 UGGT2Q9NYU1 1516 aa14.9□□□□□ -0.02
LINC00343-212ENST00000608624 KIAA0556O60303 1618 aa14.88□□□□□ -0.03
LINC00343-212ENST00000608624 SLC4A2P04920 1241 aa14.87□□□□□ -0.03
LINC00343-212ENST00000608624 ZNF219Q9P2Y4 722 aaPredicted RBP14.87□□□□□ -0.03
LINC00343-212ENST00000608624 RANGAP1P46060 587 aaPredicted RBP14.86□□□□□ -0.03
LINC00343-212ENST00000608624 SAMD9Q5K651 1589 aa14.84□□□□□ -0.03
LINC00343-212ENST00000608624 LOC105371045A0A1W2PR82 267 aa14.83□□□□□ -0.04
LINC00343-212ENST00000608624 UBTFP17480 764 aaKnown RBP14.83□□□□□ -0.04
LINC00343-212ENST00000608624 CYB5RLQ6IPT4 315 aa14.82□□□□□ -0.04
LINC00343-212ENST00000608624 TTBK1Q5TCY1 1321 aaPredicted RBP14.82□□□□□ -0.04
LINC00343-212ENST00000608624 CHRDL2Q6WN34 429 aa14.8□□□□□ -0.04
LINC00343-212ENST00000608624 P3H3Q8IVL6 736 aa14.8□□□□□ -0.04
LINC00343-212ENST00000608624 FHOD3Q2V2M9 1422 aa14.78□□□□□ -0.04
LINC00343-212ENST00000608624 CARMIL2Q6F5E8 1435 aa14.77□□□□□ -0.04
LINC00343-212ENST00000608624 ADCY10Q96PN6 1610 aa14.77□□□□□ -0.05
LINC00343-212ENST00000608624 ARHGAP35Q9NRY4 1499 aa14.76□□□□□ -0.05
LINC00343-212ENST00000608624 TNIKQ9UKE5 1360 aa14.76□□□□□ -0.05
LINC00343-212ENST00000608624 APLP2Q06481 763 aa14.75□□□□□ -0.05
LINC00343-212ENST00000608624 PTPRGP23470 1445 aa14.75□□□□□ -0.05
LINC00343-212ENST00000608624 RBM42Q9BTD8 480 aaKnown RBP14.74□□□□□ -0.05
LINC00343-212ENST00000608624 EFCAB5A4FU69 1503 aa14.73□□□□□ -0.05
LINC00343-212ENST00000608624 PLB1Q6P1J6 1458 aa14.73□□□□□ -0.05
LINC00343-212ENST00000608624 CEP162Q5TB80 1403 aa14.7□□□□□ -0.06
LINC00343-212ENST00000608624 ABCA8O94911 1581 aa14.69□□□□□ -0.06
LINC00343-212ENST00000608624 CLIP1P30622 1438 aa14.69□□□□□ -0.06
LINC00343-212ENST00000608624 ABCC2Q92887 1545 aa14.67□□□□□ -0.06
LINC00343-212ENST00000608624 UACAQ9BZF9 1416 aa14.66□□□□□ -0.06
LINC00343-212ENST00000608624 SP7Q8TDD2 431 aaPredicted RBP14.66□□□□□ -0.06
LINC00343-212ENST00000608624 ARID3CA6NKF2 412 aa14.64□□□□□ -0.07
LINC00343-212ENST00000608624 UHRF1BP1LA0JNW5 1464 aa14.63□□□□□ -0.07
LINC00343-212ENST00000608624 RAPGEF6Q8TEU7 1601 aa14.63□□□□□ -0.07
LINC00343-212ENST00000608624 PCF11O94913 1555 aaKnown RBP14.62□□□□□ -0.07
LINC00343-212ENST00000608624 ZCCHC11Q5TAX3 1644 aaKnown RBP14.62□□□□□ -0.07
LINC00343-212ENST00000608624 NUP153P49790 1475 aaKnown RBP14.62□□□□□ -0.07
LINC00343-212ENST00000608624 LRRIQ1Q96JM4 1722 aa14.6□□□□□ -0.07
LINC00343-212ENST00000608624 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP14.59□□□□□ -0.07
LINC00343-212ENST00000608624 HNRNPUL2Q1KMD3 747 aaKnown RBP14.59□□□□□ -0.07
LINC00343-212ENST00000608624 KDM5BQ9UGL1 1544 aa14.59□□□□□ -0.07
LINC00343-212ENST00000608624 CDK13Q14004 1512 aaKnown RBP14.58□□□□□ -0.08
LINC00343-212ENST00000608624 FMN1Q68DA7 1419 aa14.55□□□□□ -0.08
LINC00343-212ENST00000608624 ATP10BO94823 1461 aa14.55□□□□□ -0.08
LINC00343-212ENST00000608624 MAPKBP1O60336 1514 aa14.55□□□□□ -0.08
LINC00343-212ENST00000608624 HECW1Q76N89 1606 aa14.53□□□□□ -0.08
LINC00343-212ENST00000608624 ASXL2Q76L83 1435 aa14.53□□□□□ -0.08
LINC00343-212ENST00000608624 CASKIN1Q8WXD9 1431 aa14.51□□□□□ -0.09
LINC00343-212ENST00000608624 SAMD1Q6SPF0 538 aaPredicted RBP14.51□□□□□ -0.09
LINC00343-212ENST00000608624 FYCO1Q9BQS8 1478 aa14.5□□□□□ -0.09
LINC00343-212ENST00000608624 KIF13AQ9H1H9 1805 aa14.5□□□□□ -0.09
LINC00343-212ENST00000608624 DIP2BQ9P265 1576 aa14.5□□□□□ -0.09
LINC00343-212ENST00000608624 EPRSP07814 1512 aaKnown RBP14.5□□□□□ -0.09
LINC00343-212ENST00000608624 ATP1B4Q9UN42 357 aaPredicted RBP14.48□□□□□ -0.09
LINC00343-212ENST00000608624 WDR7Q9Y4E6 1490 aa14.48□□□□□ -0.09
LINC00343-212ENST00000608624 VPS8Q8N3P4 1428 aa14.48□□□□□ -0.09
LINC00343-212ENST00000608624 MAGI3Q5TCQ9 1506 aa14.47□□□□□ -0.09
LINC00343-212ENST00000608624 NPM1P06748 294 aaKnown RBP eCLIP14.47□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 67.2 ms