RNA–Protein interactions for RNA: ENST00000604926.1

COL4A3BP-207, Transcript of collagen type IV alpha 3 binding protein, humanhuman

Gene COL4A3BP, Length 3,355 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A3BP-207ENST00000604926 PHF23Q9BUL5 403 aaPredicted RBP8.65□□□□□ -1.02
COL4A3BP-207ENST00000604926 DHX30Q7L2E3 1194 aaKnown RBP eCLIP8.63□□□□□ -1.03
COL4A3BP-207ENST00000604926 SALL2Q9Y467 1007 aaPredicted RBP8.63□□□□□ -1.03
COL4A3BP-207ENST00000604926 ZEB1P37275 1124 aaPredicted RBP8.62□□□□□ -1.03
COL4A3BP-207ENST00000604926 KDM2AQ9Y2K7 1162 aa8.61□□□□□ -1.03
COL4A3BP-207ENST00000604926 AAMPQ13685 434 aa8.61□□□□□ -1.03
COL4A3BP-207ENST00000604926 RSF1Q96T23 1441 aaPredicted RBP8.6□□□□□ -1.03
COL4A3BP-207ENST00000604926 HSP90B1P14625 803 aaKnown RBP8.6□□□□□ -1.03
COL4A3BP-207ENST00000604926 SLC4A1APQ9BWU0 796 aaKnown RBP8.6□□□□□ -1.03
COL4A3BP-207ENST00000604926 RSPH4AQ5TD94 716 aa8.58□□□□□ -1.04
COL4A3BP-207ENST00000604926 RIMBP3CA6NJZ7 1639 aa8.58□□□□□ -1.04
COL4A3BP-207ENST00000604926 RIMBP3BA6NNM3 1639 aa8.58□□□□□ -1.04
COL4A3BP-207ENST00000604926 RIMBP3Q9UFD9 1639 aa8.58□□□□□ -1.04
COL4A3BP-207ENST00000604926 POLR3GLQ9BT43 218 aa8.58□□□□□ -1.04
COL4A3BP-207ENST00000604926 SCRIBQ14160 1630 aa8.57□□□□□ -1.04
COL4A3BP-207ENST00000604926 FBLN2P98095 1184 aa8.56□□□□□ -1.04
COL4A3BP-207ENST00000604926 MRC2Q9UBG0 1479 aa8.54□□□□□ -1.04
COL4A3BP-207ENST00000604926 RSPH6AQ9H0K4 717 aa8.53□□□□□ -1.04
COL4A3BP-207ENST00000604926 ATAD2BQ9ULI0 1458 aa8.52□□□□□ -1.05
COL4A3BP-207ENST00000604926 RBM10P98175 930 aaKnown RBP8.52□□□□□ -1.05
COL4A3BP-207ENST00000604926 SHROOM2Q13796 1616 aa8.52□□□□□ -1.05
COL4A3BP-207ENST00000604926 CLASP1Q7Z460 1538 aa8.51□□□□□ -1.05
COL4A3BP-207ENST00000604926 VSIG10Q8N0Z9 540 aa8.51□□□□□ -1.05
COL4A3BP-207ENST00000604926 NESP48681 1621 aa8.51□□□□□ -1.05
COL4A3BP-207ENST00000604926 NAP1L5Q96NT1 182 aaPredicted RBP8.5□□□□□ -1.05
COL4A3BP-207ENST00000604926 BCCIPQ9P287 314 aaKnown RBP eCLIP8.5□□□□□ -1.05
COL4A3BP-207ENST00000604926 ERCC6L2Q5T890 1561 aa8.5□□□□□ -1.05
COL4A3BP-207ENST00000604926 ABCC8Q09428 1581 aa8.47□□□□□ -1.05
COL4A3BP-207ENST00000604926 ZNF326Q5BKZ1 582 aaKnown RBP8.47□□□□□ -1.05
COL4A3BP-207ENST00000604926 DEKP35659 375 aaKnown RBP8.45□□□□□ -1.06
COL4A3BP-207ENST00000604926 CCDC9Q9Y3X0 531 aaKnown RBP8.44□□□□□ -1.06
COL4A3BP-207ENST00000604926 BRPF3Q9ULD4 1205 aa8.44□□□□□ -1.06
COL4A3BP-207ENST00000604926 CLSPNQ9HAW4 1339 aa8.44□□□□□ -1.06
COL4A3BP-207ENST00000604926 TARBP1Q13395 1621 aaKnown RBP8.43□□□□□ -1.06
COL4A3BP-207ENST00000604926 PDS5BQ9NTI5 1447 aa8.42□□□□□ -1.06
COL4A3BP-207ENST00000604926 ZBTB22O15209 634 aa8.42□□□□□ -1.06
COL4A3BP-207ENST00000604926 PPARGC1BQ86YN6 1023 aaKnown RBP8.42□□□□□ -1.06
COL4A3BP-207ENST00000604926 HMGB1P09429 215 aaKnown RBP8.41□□□□□ -1.06
COL4A3BP-207ENST00000604926 ERICH6BQ5W0A0 696 aa8.4□□□□□ -1.06
COL4A3BP-207ENST00000604926 ZMYND15Q9H091 742 aa8.4□□□□□ -1.07
COL4A3BP-207ENST00000604926 ACIN1Q9UKV3 1341 aaKnown RBP8.4□□□□□ -1.07
COL4A3BP-207ENST00000604926 TOP2AP11388 1531 aaKnown RBP8.39□□□□□ -1.07
COL4A3BP-207ENST00000604926 PUS7Q96PZ0 661 aaKnown RBP8.39□□□□□ -1.07
COL4A3BP-207ENST00000604926 ZFP91Q96JP5 570 aaPredicted RBP8.36□□□□□ -1.07
COL4A3BP-207ENST00000604926 ZNF592Q92610 1267 aa8.36□□□□□ -1.07
COL4A3BP-207ENST00000604926 ZBTB4Q9P1Z0 1013 aaPredicted RBP8.36□□□□□ -1.07
COL4A3BP-207ENST00000604926 CFTRP13569 1480 aa8.35□□□□□ -1.07
COL4A3BP-207ENST00000604926 TMED8Q6PL24 325 aaPredicted RBP8.34□□□□□ -1.07
COL4A3BP-207ENST00000604926 PBRM1Q86U86 1689 aa8.34□□□□□ -1.07
COL4A3BP-207ENST00000604926 PRDM10Q9NQV6 1147 aa8.34□□□□□ -1.07
COL4A3BP-207ENST00000604926 GTF3C5Q9Y5Q8 519 aaPredicted RBP8.33□□□□□ -1.08
COL4A3BP-207ENST00000604926 ARID3AQ99856 593 aa8.33□□□□□ -1.08
COL4A3BP-207ENST00000604926 DNMBPQ6XZF7 1577 aa8.33□□□□□ -1.08
COL4A3BP-207ENST00000604926 TICAM2Q86XR7 235 aa8.32□□□□□ -1.08
COL4A3BP-207ENST00000604926 KDM6BO15054 1643 aa8.32□□□□□ -1.08
COL4A3BP-207ENST00000604926 IFT140Q96RY7 1462 aa8.31□□□□□ -1.08
COL4A3BP-207ENST00000604926 FKBP8Q14318 412 aa8.31□□□□□ -1.08
COL4A3BP-207ENST00000604926 NAP1L2Q9ULW6 460 aaPredicted RBP8.31□□□□□ -1.08
COL4A3BP-207ENST00000604926 ARHGEF11O15085 1522 aa8.31□□□□□ -1.08
COL4A3BP-207ENST00000604926 NECTIN2Q92692 538 aa8.3□□□□□ -1.08
COL4A3BP-207ENST00000604926 ABCA5Q8WWZ7 1642 aa8.3□□□□□ -1.08
COL4A3BP-207ENST00000604926 GLIPR1L2Q4G1C9 344 aa8.3□□□□□ -1.08
COL4A3BP-207ENST00000604926 GLI2P10070 1586 aa8.29□□□□□ -1.08
COL4A3BP-207ENST00000604926 KIF13AQ9H1H9 1805 aa8.29□□□□□ -1.08
COL4A3BP-207ENST00000604926 CHD1O14646 1710 aa8.29□□□□□ -1.08
COL4A3BP-207ENST00000604926 BIVM-ERCC5R4GMW8 1640 aa8.29□□□□□ -1.08
COL4A3BP-207ENST00000604926 TRHP20396 242 aaPredicted RBP8.28□□□□□ -1.08
COL4A3BP-207ENST00000604926 ZNF428Q96B54 188 aa8.28□□□□□ -1.08
COL4A3BP-207ENST00000604926 CNPY4Q8N129 248 aa8.27□□□□□ -1.09
COL4A3BP-207ENST00000604926 MAPKBP1O60336 1514 aa8.27□□□□□ -1.09
COL4A3BP-207ENST00000604926 NEUROD1Q13562 356 aa8.27□□□□□ -1.09
COL4A3BP-207ENST00000604926 ERCC6Q03468 1493 aa8.27□□□□□ -1.09
COL4A3BP-207ENST00000604926 MYT1LQ9UL68 1186 aa8.26□□□□□ -1.09
COL4A3BP-207ENST00000604926 NCLP19338 710 aaKnown RBP8.25□□□□□ -1.09
COL4A3BP-207ENST00000604926 EIF4G3O43432 1585 aaKnown RBP8.24□□□□□ -1.09
COL4A3BP-207ENST00000604926 ZNF692Q9BU19 519 aaPredicted RBP8.24□□□□□ -1.09
COL4A3BP-207ENST00000604926 SECISBP2LQ93073 1101 aaKnown RBP8.23□□□□□ -1.09
COL4A3BP-207ENST00000604926 CWC22Q9HCG8 908 aaKnown RBP8.22□□□□□ -1.09
COL4A3BP-207ENST00000604926 CHMP4BQ9H444 224 aaKnown RBP8.22□□□□□ -1.09
COL4A3BP-207ENST00000604926 CERS3Q8IU89 383 aa8.21□□□□□ -1.1
COL4A3BP-207ENST00000604926 IQSEC2Q5JU85 1478 aa8.2□□□□□ -1.1
COL4A3BP-207ENST00000604926 ZNF526Q8TF50 670 aaPredicted RBP8.2□□□□□ -1.1
COL4A3BP-207ENST00000604926 CLSTN1O94985 981 aa8.19□□□□□ -1.1
COL4A3BP-207ENST00000604926 PSMD1Q99460 953 aa8.19□□□□□ -1.1
COL4A3BP-207ENST00000604926 SYNJ1O43426 1573 aa8.19□□□□□ -1.1
COL4A3BP-207ENST00000604926 TEX2Q8IWB9 1127 aa8.18□□□□□ -1.1
COL4A3BP-207ENST00000604926 PRDM16Q9HAZ2 1276 aa8.18□□□□□ -1.1
COL4A3BP-207ENST00000604926 KCNG1Q9UIX4 513 aa8.18□□□□□ -1.1
COL4A3BP-207ENST00000604926 ZBTB7CA1YPR0 619 aa8.17□□□□□ -1.1
COL4A3BP-207ENST00000604926 CHRM1P11229 460 aaPredicted RBP8.17□□□□□ -1.1
COL4A3BP-207ENST00000604926 IPO4Q8TEX9 1081 aaKnown RBP8.16□□□□□ -1.1
COL4A3BP-207ENST00000604926 WWC1Q8IX03 1113 aa8.16□□□□□ -1.1
COL4A3BP-207ENST00000604926 ARAP1Q96P48 1450 aa8.16□□□□□ -1.1
COL4A3BP-207ENST00000604926 CEP164Q9UPV0 1460 aa8.16□□□□□ -1.1
COL4A3BP-207ENST00000604926 MAGI1Q96QZ7 1491 aaPredicted RBP8.15□□□□□ -1.1
COL4A3BP-207ENST00000604926 CADPSQ9ULU8 1353 aa8.15□□□□□ -1.1
COL4A3BP-207ENST00000604926 PABPN1Q86U42 306 aaKnown RBP eCLIP8.14□□□□□ -1.11
COL4A3BP-207ENST00000604926 FAM43BQ6ZT52 329 aaPredicted RBP8.14□□□□□ -1.11
COL4A3BP-207ENST00000604926 C1orf115Q9H7X2 142 aa8.14□□□□□ -1.11
COL4A3BP-207ENST00000604926 KIAA0586Q9BVV6 1533 aa8.13□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms