RNA–Protein interactions for RNA: ENST00000604236.5

FGFR2-222, Transcript of fibroblast growth factor receptor 2, humanhuman

TSL 1 (best)

Gene FGFR2, Length 3,501 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FGFR2-222ENST00000604236 CARMIL1Q5VZK9 1371 aa22.06■■□□□ 1.12
FGFR2-222ENST00000604236 PRXQ9BXM0 1461 aa22.06■■□□□ 1.12
FGFR2-222ENST00000604236 IRX6P78412 446 aaPredicted RBP22.01■■□□□ 1.11
FGFR2-222ENST00000604236 ARAP1Q96P48 1450 aa21.99■■□□□ 1.11
FGFR2-222ENST00000604236 RAD54L2Q9Y4B4 1467 aa21.98■■□□□ 1.11
FGFR2-222ENST00000604236 CADPSQ9ULU8 1353 aa21.97■■□□□ 1.11
FGFR2-222ENST00000604236 ERICH3Q5RHP9 1530 aa21.97■■□□□ 1.11
FGFR2-222ENST00000604236 NESP48681 1621 aa21.97■■□□□ 1.11
FGFR2-222ENST00000604236 FHOD3Q2V2M9 1422 aa21.96■■□□□ 1.11
FGFR2-222ENST00000604236 CCNB3Q8WWL7 1395 aa21.93■■□□□ 1.1
FGFR2-222ENST00000604236 MTUS2Q5JR59 1369 aa21.91■■□□□ 1.1
FGFR2-222ENST00000604236 SENP3Q9H4L4 574 aaPredicted RBP21.89■■□□□ 1.1
FGFR2-222ENST00000604236 IGF1RP08069 1367 aa21.89■■□□□ 1.09
FGFR2-222ENST00000604236 RAB3GAP2Q9H2M9 1393 aa21.88■■□□□ 1.09
FGFR2-222ENST00000604236 DHX57Q6P158 1386 aaKnown RBP21.86■■□□□ 1.09
FGFR2-222ENST00000604236 FGD5Q6ZNL6 1462 aa21.86■■□□□ 1.09
FGFR2-222ENST00000604236 ARHGAP35Q9NRY4 1499 aa21.85■■□□□ 1.09
FGFR2-222ENST00000604236 FKBP8Q14318 412 aa21.84■■□□□ 1.09
FGFR2-222ENST00000604236 MYT1LQ9UL68 1186 aa21.83■■□□□ 1.08
FGFR2-222ENST00000604236 CC2D2AQ9P2K1 1620 aa21.8■■□□□ 1.08
FGFR2-222ENST00000604236 SALL2Q9Y467 1007 aaPredicted RBP21.79■■□□□ 1.08
FGFR2-222ENST00000604236 FANCD2Q9BXW9 1451 aa21.77■■□□□ 1.08
FGFR2-222ENST00000604236 ANP32CO43423 234 aa21.77■■□□□ 1.08
FGFR2-222ENST00000604236 TONSLQ96HA7 1378 aa21.76■■□□□ 1.07
FGFR2-222ENST00000604236 KDM2AQ9Y2K7 1162 aa21.76■■□□□ 1.07
FGFR2-222ENST00000604236 FAM9BQ8IZU0 186 aa21.76■■□□□ 1.07
FGFR2-222ENST00000604236 NEFLP07196 543 aa21.75■■□□□ 1.07
FGFR2-222ENST00000604236 PHLDB1Q86UU1 1377 aa21.75■■□□□ 1.07
FGFR2-222ENST00000604236 HNRNPUQ00839 825 aaKnown RBP eCLIP21.7■■□□□ 1.06
FGFR2-222ENST00000604236 CHMP7Q8WUX9 453 aaPredicted RBP21.69■■□□□ 1.06
FGFR2-222ENST00000604236 GRWD1Q9BQ67 446 aaKnown RBP eCLIP21.68■■□□□ 1.06
FGFR2-222ENST00000604236 RRBP1Q9P2E9 1410 aaKnown RBP21.66■■□□□ 1.06
FGFR2-222ENST00000604236 ZNF644Q9H582 1327 aaPredicted RBP21.65■■□□□ 1.06
FGFR2-222ENST00000604236 CLSPNQ9HAW4 1339 aa21.64■■□□□ 1.05
FGFR2-222ENST00000604236 PELP1Q8IZL8 1130 aaKnown RBP21.6■■□□□ 1.05
FGFR2-222ENST00000604236 PRDM2Q13029 1718 aa21.6■■□□□ 1.05
FGFR2-222ENST00000604236 SLC4A1APQ9BWU0 796 aaKnown RBP21.59■■□□□ 1.05
FGFR2-222ENST00000604236 RGL3Q3MIN7 710 aa21.58■■□□□ 1.05
FGFR2-222ENST00000604236 SUPT16HQ9Y5B9 1047 aaKnown RBP21.58■■□□□ 1.05
FGFR2-222ENST00000604236 FHAD1B1AJZ9 1412 aa21.57■■□□□ 1.04
FGFR2-222ENST00000604236 SETD5Q9C0A6 1442 aa21.57■■□□□ 1.04
FGFR2-222ENST00000604236 POLA1P09884 1462 aaPredicted RBP21.57■■□□□ 1.04
FGFR2-222ENST00000604236 TOPBP1Q92547 1522 aa21.56■■□□□ 1.04
FGFR2-222ENST00000604236 AQRO60306 1485 aaKnown RBP eCLIP21.55■■□□□ 1.04
FGFR2-222ENST00000604236 PDS5BQ9NTI5 1447 aa21.54■■□□□ 1.04
FGFR2-222ENST00000604236 TIAM1Q13009 1591 aa21.54■■□□□ 1.04
FGFR2-222ENST00000604236 LRRC9Q6ZRR7 1453 aa21.53■■□□□ 1.04
FGFR2-222ENST00000604236 DNMBPQ6XZF7 1577 aa21.5■■□□□ 1.03
FGFR2-222ENST00000604236 PPP1R15AO75807 674 aaPredicted RBP21.48■■□□□ 1.03
FGFR2-222ENST00000604236 CFDP1Q9UEE9 299 aaPredicted RBP21.45■■□□□ 1.02
FGFR2-222ENST00000604236 ABCA10Q8WWZ4 1543 aa21.45■■□□□ 1.02
FGFR2-222ENST00000604236 PCF11O94913 1555 aaKnown RBP21.45■■□□□ 1.02
FGFR2-222ENST00000604236 HSPA5P11021 654 aaKnown RBP21.43■■□□□ 1.02
FGFR2-222ENST00000604236 L3MBTL2Q969R5 705 aa21.42■■□□□ 1.02
FGFR2-222ENST00000604236 MRS2Q9HD23 443 aa21.41■■□□□ 1.02
FGFR2-222ENST00000604236 URB2Q14146 1524 aaKnown RBP21.38■■□□□ 1.01
FGFR2-222ENST00000604236 MPHOSPH9Q99550 1183 aa21.37■■□□□ 1.01
FGFR2-222ENST00000604236 CCDC184Q52MB2 194 aa21.35■■□□□ 1.01
FGFR2-222ENST00000604236 GAPVD1Q14C86 1478 aa21.35■■□□□ 1.01
FGFR2-222ENST00000604236 EIF4G2P78344 907 aaKnown RBP eCLIP21.34■■□□□ 1.01
FGFR2-222ENST00000604236 MAP3K1Q13233 1512 aa21.34■■□□□ 1.01
FGFR2-222ENST00000604236 FMN1Q68DA7 1419 aa21.33■■□□□ 1.01
FGFR2-222ENST00000604236 CASKIN1Q8WXD9 1431 aa21.33■■□□□ 1
FGFR2-222ENST00000604236 CDK11AQ9UQ88 783 aaPredicted RBP21.33■■□□□ 1
FGFR2-222ENST00000604236 HNRNPMP52272 730 aaKnown RBP eCLIP21.31■■□□□ 1
FGFR2-222ENST00000604236 FYCO1Q9BQS8 1478 aa21.3■■□□□ 1
FGFR2-222ENST00000604236 ERCC6Q03468 1493 aa21.29■■□□□ 1
FGFR2-222ENST00000604236 MAPKBP1O60336 1514 aa21.28■■□□□ 1
FGFR2-222ENST00000604236 EFCAB5A4FU69 1503 aa21.27■■□□□ 1
FGFR2-222ENST00000604236 LAMC3Q9Y6N6 1575 aa21.26■□□□□ 0.99
FGFR2-222ENST00000604236 PKD2Q13563 968 aa21.26■□□□□ 0.99
FGFR2-222ENST00000604236 CUL7Q14999 1698 aa21.26■□□□□ 0.99
FGFR2-222ENST00000604236 WDR97A6NE52 1622 aa21.25■□□□□ 0.99
FGFR2-222ENST00000604236 PLEKHD1A6NEE1 506 aa21.25■□□□□ 0.99
FGFR2-222ENST00000604236 FGD6Q6ZV73 1430 aa21.23■□□□□ 0.99
FGFR2-222ENST00000604236 TSPY4P0CV99 314 aa21.23■□□□□ 0.99
FGFR2-222ENST00000604236 TSPY10P0CW01 314 aa21.23■□□□□ 0.99
FGFR2-222ENST00000604236 ERICH6Q7L0X2 663 aa21.23■□□□□ 0.99
FGFR2-222ENST00000604236 CFAP43Q8NDM7 1665 aa21.22■□□□□ 0.99
FGFR2-222ENST00000604236 CHGAP10645 457 aaKnown RBP21.22■□□□□ 0.99
FGFR2-222ENST00000604236 DCAF11Q8TEB1 546 aa21.22■□□□□ 0.99
FGFR2-222ENST00000604236 B4GALNT3Q6L9W6 998 aa21.21■□□□□ 0.99
FGFR2-222ENST00000604236 C11orf95C9JLR9 678 aaPredicted RBP21.21■□□□□ 0.99
FGFR2-222ENST00000604236 CTTNBP2Q8WZ74 1663 aa21.2■□□□□ 0.98
FGFR2-222ENST00000604236 PTPRKQ15262 1439 aa21.19■□□□□ 0.98
FGFR2-222ENST00000604236 JPH4Q96JJ6 628 aa21.19■□□□□ 0.98
FGFR2-222ENST00000604236 NBPF8Q3BBV2 869 aa21.16■□□□□ 0.98
FGFR2-222ENST00000604236 CCDC18Q5T9S5 1454 aa21.16■□□□□ 0.98
FGFR2-222ENST00000604236 TSHZ2Q9NRE2 1034 aa21.15■□□□□ 0.98
FGFR2-222ENST00000604236 NCOA2Q15596 1464 aa21.14■□□□□ 0.98
FGFR2-222ENST00000604236 CARD11Q9BXL7 1154 aa21.14■□□□□ 0.97
FGFR2-222ENST00000604236 BCL11AQ9H165 835 aa21.14■□□□□ 0.97
FGFR2-222ENST00000604236 PLPPR3Q6T4P5 718 aa21.13■□□□□ 0.97
FGFR2-222ENST00000604236 SNAPC4Q5SXM2 1469 aa21.13■□□□□ 0.97
FGFR2-222ENST00000604236 KIF21AQ7Z4S6 1674 aa21.12■□□□□ 0.97
FGFR2-222ENST00000604236 CDK13Q14004 1512 aaKnown RBP21.12■□□□□ 0.97
FGFR2-222ENST00000604236 TMC1Q8TDI8 760 aa21.12■□□□□ 0.97
FGFR2-222ENST00000604236 WASHC2AQ641Q2 1341 aa21.11■□□□□ 0.97
FGFR2-222ENST00000604236 CC2D1BQ5T0F9 858 aaKnown RBP21.11■□□□□ 0.97
FGFR2-222ENST00000604236 MYOM3Q5VTT5 1437 aa21.09■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms