RNA–Protein interactions for RNA: ENST00000604236.5

FGFR2-222, Transcript of fibroblast growth factor receptor 2, humanhuman

TSL 1 (best)

Gene FGFR2, Length 3,501 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FGFR2-222ENST00000604236 NISCHQ9Y2I1 1504 aa30.52■■■□□ 2.48
FGFR2-222ENST00000604236 DCAF8L2P0C7V8 631 aa28.06■■■□□ 2.08
FGFR2-222ENST00000604236 SHROOM4Q9ULL8 1493 aa27.86■■■□□ 2.05
FGFR2-222ENST00000604236 SUPT5HO00267 1087 aaKnown RBP27.49■■□□□ 1.99
FGFR2-222ENST00000604236 EHMT2Q96KQ7 1210 aa26.47■■□□□ 1.83
FGFR2-222ENST00000604236 FAM9AQ8IZU1 332 aaPredicted RBP25.81■■□□□ 1.72
FGFR2-222ENST00000604236 CCDC180Q9P1Z9 1646 aa25.73■■□□□ 1.71
FGFR2-222ENST00000604236 ZCCHC6Q5VYS8 1495 aaKnown RBP25.72■■□□□ 1.71
FGFR2-222ENST00000604236 PCGF6Q9BYE7 350 aa25.64■■□□□ 1.69
FGFR2-222ENST00000604236 LOC105371045A0A1W2PR82 267 aa25.61■■□□□ 1.69
FGFR2-222ENST00000604236 CHIC1Q5VXU3 224 aa25.47■■□□□ 1.67
FGFR2-222ENST00000604236 TTBK1Q5TCY1 1321 aaPredicted RBP25.39■■□□□ 1.65
FGFR2-222ENST00000604236 PPARGC1BQ86YN6 1023 aaKnown RBP25.34■■□□□ 1.65
FGFR2-222ENST00000604236 TRIM41Q8WV44 630 aa24.99■■□□□ 1.59
FGFR2-222ENST00000604236 ABCC9O60706 1549 aa24.98■■□□□ 1.59
FGFR2-222ENST00000604236 MYO15BQ96JP2 1530 aa24.95■■□□□ 1.58
FGFR2-222ENST00000604236 RANGAP1P46060 587 aaPredicted RBP24.88■■□□□ 1.57
FGFR2-222ENST00000604236 DCAF1Q9Y4B6 1507 aa24.77■■□□□ 1.56
FGFR2-222ENST00000604236 PABPN1Q86U42 306 aaKnown RBP eCLIP24.68■■□□□ 1.54
FGFR2-222ENST00000604236 HRCP23327 699 aa24.55■■□□□ 1.52
FGFR2-222ENST00000604236 SCRIBQ14160 1630 aa24.53■■□□□ 1.52
FGFR2-222ENST00000604236 UBTFP17480 764 aaKnown RBP24.23■■□□□ 1.47
FGFR2-222ENST00000604236 RSF1Q96T23 1441 aaPredicted RBP24.22■■□□□ 1.47
FGFR2-222ENST00000604236 TRIM26Q12899 539 aaPredicted RBP24.19■■□□□ 1.46
FGFR2-222ENST00000604236 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP24.17■■□□□ 1.46
FGFR2-222ENST00000604236 CCER1Q8TC90 406 aaPredicted RBP24.05■■□□□ 1.44
FGFR2-222ENST00000604236 CECR2Q9BXF3 1484 aa24.03■■□□□ 1.44
FGFR2-222ENST00000604236 NACADO15069 1562 aa23.97■■□□□ 1.43
FGFR2-222ENST00000604236 RB1CC1Q8TDY2 1594 aa23.95■■□□□ 1.42
FGFR2-222ENST00000604236 HNRNPUL2Q1KMD3 747 aaKnown RBP23.85■■□□□ 1.41
FGFR2-222ENST00000604236 MROH2BQ7Z745 1585 aa23.81■■□□□ 1.4
FGFR2-222ENST00000604236 ATP1B4Q9UN42 357 aaPredicted RBP23.73■■□□□ 1.39
FGFR2-222ENST00000604236 ITGAEP38570 1179 aa23.7■■□□□ 1.38
FGFR2-222ENST00000604236 YTHDC1Q96MU7 727 aaKnown RBP23.7■■□□□ 1.38
FGFR2-222ENST00000604236 WIZO95785 1651 aa23.67■■□□□ 1.38
FGFR2-222ENST00000604236 APLP2Q06481 763 aa23.63■■□□□ 1.37
FGFR2-222ENST00000604236 BAZ1AQ9NRL2 1556 aaPredicted RBP23.45■■□□□ 1.35
FGFR2-222ENST00000604236 CSRNP3Q8WYN3 585 aa23.39■■□□□ 1.33
FGFR2-222ENST00000604236 ABCC8Q09428 1581 aa23.35■■□□□ 1.33
FGFR2-222ENST00000604236 ZEB1P37275 1124 aaPredicted RBP23.34■■□□□ 1.33
FGFR2-222ENST00000604236 P3H3Q8IVL6 736 aa23.31■■□□□ 1.32
FGFR2-222ENST00000604236 SOGA1O94964 1423 aa23.3■■□□□ 1.32
FGFR2-222ENST00000604236 CCDC88BA6NC98 1476 aa23.23■■□□□ 1.31
FGFR2-222ENST00000604236 SMARCA4P51532 1647 aa23.23■■□□□ 1.31
FGFR2-222ENST00000604236 TOP2AP11388 1531 aaKnown RBP23.19■■□□□ 1.3
FGFR2-222ENST00000604236 RUSC2Q8N2Y8 1516 aa23.17■■□□□ 1.3
FGFR2-222ENST00000604236 UNC13AQ9UPW8 1703 aa23.15■■□□□ 1.3
FGFR2-222ENST00000604236 DIEXFQ68CQ4 756 aaKnown RBP23.15■■□□□ 1.3
FGFR2-222ENST00000604236 ARID3CA6NKF2 412 aa23.11■■□□□ 1.29
FGFR2-222ENST00000604236 SMARCA2P51531 1590 aa23.08■■□□□ 1.28
FGFR2-222ENST00000604236 EIF4G1Q04637 1599 aaKnown RBP22.99■■□□□ 1.27
FGFR2-222ENST00000604236 CEP162Q5TB80 1403 aa22.97■■□□□ 1.27
FGFR2-222ENST00000604236 CNGB1Q14028 1251 aaPredicted RBP22.95■■□□□ 1.27
FGFR2-222ENST00000604236 BICRAQ9NZM4 1560 aa22.94■■□□□ 1.26
FGFR2-222ENST00000604236 SCAF1Q9H7N4 1312 aaKnown RBP22.91■■□□□ 1.26
FGFR2-222ENST00000604236 FAM50AQ14320 339 aaKnown RBP22.89■■□□□ 1.26
FGFR2-222ENST00000604236 NEUROD1Q13562 356 aa22.89■■□□□ 1.25
FGFR2-222ENST00000604236 GTF3C3Q9Y5Q9 886 aa22.86■■□□□ 1.25
FGFR2-222ENST00000604236 WRNQ14191 1432 aaPredicted RBP eCLIP22.85■■□□□ 1.25
FGFR2-222ENST00000604236 HIRIP3Q9BW71 556 aaPredicted RBP22.83■■□□□ 1.25
FGFR2-222ENST00000604236 BAZ1BQ9UIG0 1483 aaKnown RBP22.79■■□□□ 1.24
FGFR2-222ENST00000604236 TNIKQ9UKE5 1360 aa22.76■■□□□ 1.23
FGFR2-222ENST00000604236 ATAD2BQ9ULI0 1458 aa22.75■■□□□ 1.23
FGFR2-222ENST00000604236 CENPBP07199 599 aaPredicted RBP22.73■■□□□ 1.23
FGFR2-222ENST00000604236 KANK4Q5T7N3 995 aaPredicted RBP22.72■■□□□ 1.23
FGFR2-222ENST00000604236 EEA1Q15075 1411 aa22.72■■□□□ 1.23
FGFR2-222ENST00000604236 MIER1Q8N108 512 aa22.7■■□□□ 1.22
FGFR2-222ENST00000604236 CLIP1P30622 1438 aa22.7■■□□□ 1.22
FGFR2-222ENST00000604236 GOLGA3Q08378 1498 aa22.68■■□□□ 1.22
FGFR2-222ENST00000604236 ZNF316A6NFI3 1004 aaPredicted RBP22.67■■□□□ 1.22
FGFR2-222ENST00000604236 SYNJ1O43426 1573 aa22.6■■□□□ 1.21
FGFR2-222ENST00000604236 ACIN1Q9UKV3 1341 aaKnown RBP22.57■■□□□ 1.2
FGFR2-222ENST00000604236 PEG3Q9GZU2 1588 aa22.57■■□□□ 1.2
FGFR2-222ENST00000604236 CEP164Q9UPV0 1460 aa22.54■■□□□ 1.2
FGFR2-222ENST00000604236 DNAJC5BQ9UF47 199 aa22.52■■□□□ 1.19
FGFR2-222ENST00000604236 BCANQ96GW7 911 aa22.51■■□□□ 1.19
FGFR2-222ENST00000604236 RAPGEF2Q9Y4G8 1499 aa22.51■■□□□ 1.19
FGFR2-222ENST00000604236 FBLN2P98095 1184 aa22.51■■□□□ 1.19
FGFR2-222ENST00000604236 POLR3GLQ9BT43 218 aa22.48■■□□□ 1.19
FGFR2-222ENST00000604236 CHIC2Q9UKJ5 165 aa22.45■■□□□ 1.19
FGFR2-222ENST00000604236 SENP3-EIF4A1A0A087X0R7 540 aa22.44■■□□□ 1.18
FGFR2-222ENST00000604236 SIN3AQ96ST3 1273 aa22.43■■□□□ 1.18
FGFR2-222ENST00000604236 DDX10Q13206 875 aaKnown RBP22.34■■□□□ 1.17
FGFR2-222ENST00000604236 TRIM52Q96A61 297 aa22.32■■□□□ 1.16
FGFR2-222ENST00000604236 VPS8Q8N3P4 1428 aa22.3■■□□□ 1.16
FGFR2-222ENST00000604236 KIF21BO75037 1637 aa22.3■■□□□ 1.16
FGFR2-222ENST00000604236 KCNH8Q96L42 1107 aa22.27■■□□□ 1.16
FGFR2-222ENST00000604236 ZNF326Q5BKZ1 582 aaKnown RBP22.24■■□□□ 1.15
FGFR2-222ENST00000604236 TOP2BQ02880 1626 aa22.24■■□□□ 1.15
FGFR2-222ENST00000604236 NCAPD3P42695 1498 aa22.23■■□□□ 1.15
FGFR2-222ENST00000604236 CUX2O14529 1486 aa22.21■■□□□ 1.15
FGFR2-222ENST00000604236 RRP7BPQ9NSQ0 103 aa22.2■■□□□ 1.14
FGFR2-222ENST00000604236 ZNF777Q9ULD5 760 aaPredicted RBP22.18■■□□□ 1.14
FGFR2-222ENST00000604236 KIF27Q86VH2 1401 aa22.17■■□□□ 1.14
FGFR2-222ENST00000604236 TDRD9Q8NDG6 1382 aaKnown RBP22.16■■□□□ 1.14
FGFR2-222ENST00000604236 CUX1P39880 1505 aa22.14■■□□□ 1.14
FGFR2-222ENST00000604236 HMGXB3Q12766 1538 aa22.12■■□□□ 1.13
FGFR2-222ENST00000604236 FOXD1Q16676 465 aa22.1■■□□□ 1.13
FGFR2-222ENST00000604236 CFTRP13569 1480 aa22.06■■□□□ 1.12
FGFR2-222ENST00000604236 BIVM-ERCC5R4GMW8 1640 aa22.06■■□□□ 1.12
Retrieved 100 of 20,778 RNA–protein pairs in 102.3 ms