RNA–Protein interactions for RNA: ENST00000604213.1

LYSMD4-211, Transcript of LysM domain containing 4, humanhuman

TSL 1 (best)

Gene LYSMD4, Length 2,356 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD4-211ENST00000604213 SIN3AQ96ST3 1273 aa21.69■■□□□ 1.06
LYSMD4-211ENST00000604213 HMGXB3Q12766 1538 aa21.69■■□□□ 1.06
LYSMD4-211ENST00000604213 LRRC9Q6ZRR7 1453 aa21.68■■□□□ 1.06
LYSMD4-211ENST00000604213 NCAPD3P42695 1498 aa21.68■■□□□ 1.06
LYSMD4-211ENST00000604213 PHLDB1Q86UU1 1377 aa21.67■■□□□ 1.06
LYSMD4-211ENST00000604213 CFTRP13569 1480 aa21.66■■□□□ 1.06
LYSMD4-211ENST00000604213 TIMELESSQ9UNS1 1208 aa21.65■■□□□ 1.06
LYSMD4-211ENST00000604213 IGF1RP08069 1367 aa21.64■■□□□ 1.06
LYSMD4-211ENST00000604213 CCER2I3L3R5 266 aa21.62■■□□□ 1.05
LYSMD4-211ENST00000604213 NEFLP07196 543 aa21.59■■□□□ 1.05
LYSMD4-211ENST00000604213 FAM50AQ14320 339 aaKnown RBP21.58■■□□□ 1.05
LYSMD4-211ENST00000604213 RBM19Q9Y4C8 960 aaKnown RBP21.58■■□□□ 1.04
LYSMD4-211ENST00000604213 CARMIL1Q5VZK9 1371 aa21.54■■□□□ 1.04
LYSMD4-211ENST00000604213 CFAP43Q8NDM7 1665 aa21.54■■□□□ 1.04
LYSMD4-211ENST00000604213 ANP32CO43423 234 aa21.54■■□□□ 1.04
LYSMD4-211ENST00000604213 TRIM52Q96A61 297 aa21.53■■□□□ 1.04
LYSMD4-211ENST00000604213 HIRIP3Q9BW71 556 aaPredicted RBP21.53■■□□□ 1.04
LYSMD4-211ENST00000604213 FHAD1B1AJZ9 1412 aa21.53■■□□□ 1.04
LYSMD4-211ENST00000604213 PCF11O94913 1555 aaKnown RBP21.49■■□□□ 1.03
LYSMD4-211ENST00000604213 BCL11AQ9H165 835 aa21.48■■□□□ 1.03
LYSMD4-211ENST00000604213 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP21.47■■□□□ 1.03
LYSMD4-211ENST00000604213 PRDM2Q13029 1718 aa21.45■■□□□ 1.02
LYSMD4-211ENST00000604213 FGD5Q6ZNL6 1462 aa21.4■■□□□ 1.02
LYSMD4-211ENST00000604213 P3H3Q8IVL6 736 aa21.4■■□□□ 1.02
LYSMD4-211ENST00000604213 FYCO1Q9BQS8 1478 aa21.38■■□□□ 1.01
LYSMD4-211ENST00000604213 TONSLQ96HA7 1378 aa21.38■■□□□ 1.01
LYSMD4-211ENST00000604213 ATP1B4Q9UN42 357 aaPredicted RBP21.37■■□□□ 1.01
LYSMD4-211ENST00000604213 FHOD3Q2V2M9 1422 aa21.36■■□□□ 1.01
LYSMD4-211ENST00000604213 CASKIN1Q8WXD9 1431 aa21.35■■□□□ 1.01
LYSMD4-211ENST00000604213 MSH5O43196 834 aa21.34■■□□□ 1.01
LYSMD4-211ENST00000604213 AQRO60306 1485 aaKnown RBP eCLIP21.34■■□□□ 1.01
LYSMD4-211ENST00000604213 CCDC18Q5T9S5 1454 aa21.32■■□□□ 1
LYSMD4-211ENST00000604213 FGD6Q6ZV73 1430 aa21.32■■□□□ 1
LYSMD4-211ENST00000604213 UACAQ9BZF9 1416 aa21.31■■□□□ 1
LYSMD4-211ENST00000604213 CADPSQ9ULU8 1353 aa21.31■■□□□ 1
LYSMD4-211ENST00000604213 EFCAB5A4FU69 1503 aa21.3■■□□□ 1
LYSMD4-211ENST00000604213 HFM1A2PYH4 1435 aa21.29■■□□□ 1
LYSMD4-211ENST00000604213 PTPRKQ15262 1439 aa21.28■■□□□ 1
LYSMD4-211ENST00000604213 FANCIQ9NVI1 1328 aa21.27■■□□□ 1
LYSMD4-211ENST00000604213 KDM5BQ9UGL1 1544 aa21.26■□□□□ 0.99
LYSMD4-211ENST00000604213 PTPN23Q9H3S7 1636 aa21.25■□□□□ 0.99
LYSMD4-211ENST00000604213 HNRNPUQ00839 825 aaKnown RBP eCLIP21.25■□□□□ 0.99
LYSMD4-211ENST00000604213 CDK11AQ9UQ88 783 aaPredicted RBP21.22■□□□□ 0.99
LYSMD4-211ENST00000604213 NAIPQ13075 1403 aa21.21■□□□□ 0.99
LYSMD4-211ENST00000604213 IRX6P78412 446 aaPredicted RBP21.19■□□□□ 0.98
LYSMD4-211ENST00000604213 SNAPC4Q5SXM2 1469 aa21.19■□□□□ 0.98
LYSMD4-211ENST00000604213 FMN1Q68DA7 1419 aa21.19■□□□□ 0.98
LYSMD4-211ENST00000604213 MTUS2Q5JR59 1369 aa21.17■□□□□ 0.98
LYSMD4-211ENST00000604213 WASHC2AQ641Q2 1341 aa21.16■□□□□ 0.98
LYSMD4-211ENST00000604213 ERICH6BQ5W0A0 696 aa21.16■□□□□ 0.98
LYSMD4-211ENST00000604213 ABCA10Q8WWZ4 1543 aa21.16■□□□□ 0.98
LYSMD4-211ENST00000604213 CTTNBP2Q8WZ74 1663 aa21.14■□□□□ 0.97
LYSMD4-211ENST00000604213 RAD54L2Q9Y4B4 1467 aa21.14■□□□□ 0.97
LYSMD4-211ENST00000604213 HSPA5P11021 654 aaKnown RBP21.14■□□□□ 0.97
LYSMD4-211ENST00000604213 CC2D2AQ9P2K1 1620 aa21.13■□□□□ 0.97
LYSMD4-211ENST00000604213 MYOM3Q5VTT5 1437 aa21.13■□□□□ 0.97
LYSMD4-211ENST00000604213 CUL7Q14999 1698 aa21.11■□□□□ 0.97
LYSMD4-211ENST00000604213 NCOA2Q15596 1464 aa21.11■□□□□ 0.97
LYSMD4-211ENST00000604213 PPP4R2Q9NY27 417 aa21.1■□□□□ 0.97
LYSMD4-211ENST00000604213 FANCD2Q9BXW9 1451 aa21.1■□□□□ 0.97
LYSMD4-211ENST00000604213 DNMBPQ6XZF7 1577 aa21.09■□□□□ 0.97
LYSMD4-211ENST00000604213 LRRIQ1Q96JM4 1722 aa21.07■□□□□ 0.96
LYSMD4-211ENST00000604213 POLA1P09884 1462 aaPredicted RBP21.07■□□□□ 0.96
LYSMD4-211ENST00000604213 CNTLNQ9NXG0 1405 aa21.06■□□□□ 0.96
LYSMD4-211ENST00000604213 CCDC184Q52MB2 194 aa21.06■□□□□ 0.96
LYSMD4-211ENST00000604213 ERICH6Q7L0X2 663 aa21.06■□□□□ 0.96
LYSMD4-211ENST00000604213 DENND4BO75064 1496 aaPredicted RBP21.05■□□□□ 0.96
LYSMD4-211ENST00000604213 GRIN2BQ13224 1484 aa21.05■□□□□ 0.96
LYSMD4-211ENST00000604213 EIF4G2P78344 907 aaKnown RBP eCLIP21.04■□□□□ 0.96
LYSMD4-211ENST00000604213 SAMD9Q5K651 1589 aa21.03■□□□□ 0.96
LYSMD4-211ENST00000604213 TOPBP1Q92547 1522 aa21.03■□□□□ 0.96
LYSMD4-211ENST00000604213 SUPT6HQ7KZ85 1726 aaKnown RBP21.03■□□□□ 0.96
LYSMD4-211ENST00000604213 EHBP1L1Q8N3D4 1523 aa21.01■□□□□ 0.95
LYSMD4-211ENST00000604213 THOC2Q8NI27 1593 aaKnown RBP21.01■□□□□ 0.95
LYSMD4-211ENST00000604213 HECW1Q76N89 1606 aa21■□□□□ 0.95
LYSMD4-211ENST00000604213 UGGT2Q9NYU1 1516 aa21■□□□□ 0.95
LYSMD4-211ENST00000604213 ARHGEF11O15085 1522 aa21■□□□□ 0.95
LYSMD4-211ENST00000604213 RRP7BPQ9NSQ0 103 aa21■□□□□ 0.95
LYSMD4-211ENST00000604213 PRKRIP1Q9H875 184 aaPredicted RBP20.99■□□□□ 0.95
LYSMD4-211ENST00000604213 NCOA1Q15788 1441 aa20.98■□□□□ 0.95
LYSMD4-211ENST00000604213 GCC2Q8IWJ2 1684 aa20.98■□□□□ 0.95
LYSMD4-211ENST00000604213 C11orf95C9JLR9 678 aaPredicted RBP20.97■□□□□ 0.95
LYSMD4-211ENST00000604213 CCDC7Q96M83 1385 aa20.97■□□□□ 0.95
LYSMD4-211ENST00000604213 ZBED9Q6R2W3 1325 aa20.97■□□□□ 0.95
LYSMD4-211ENST00000604213 TCOF1Q13428 1488 aaKnown RBP20.97■□□□□ 0.95
LYSMD4-211ENST00000604213 AKNAQ7Z591 1439 aa20.94■□□□□ 0.94
LYSMD4-211ENST00000604213 B4GALNT3Q6L9W6 998 aa20.94■□□□□ 0.94
LYSMD4-211ENST00000604213 FAM9BQ8IZU0 186 aa20.94■□□□□ 0.94
LYSMD4-211ENST00000604213 CHIC2Q9UKJ5 165 aa20.94■□□□□ 0.94
LYSMD4-211ENST00000604213 KDM6BO15054 1643 aa20.93■□□□□ 0.94
LYSMD4-211ENST00000604213 MAGI3Q5TCQ9 1506 aa20.93■□□□□ 0.94
LYSMD4-211ENST00000604213 L3MBTL2Q969R5 705 aa20.93■□□□□ 0.94
LYSMD4-211ENST00000604213 MRS2Q9HD23 443 aa20.93■□□□□ 0.94
LYSMD4-211ENST00000604213 MYT1LQ9UL68 1186 aa20.93■□□□□ 0.94
LYSMD4-211ENST00000604213 MPHOSPH9Q99550 1183 aa20.92■□□□□ 0.94
LYSMD4-211ENST00000604213 NBPF8Q3BBV2 869 aa20.85■□□□□ 0.93
LYSMD4-211ENST00000604213 ABCA5Q8WWZ7 1642 aa20.84■□□□□ 0.93
LYSMD4-211ENST00000604213 FOXD1Q16676 465 aa20.83■□□□□ 0.93
LYSMD4-211ENST00000604213 KIF21AQ7Z4S6 1674 aa20.83■□□□□ 0.93
LYSMD4-211ENST00000604213 SPATA31E1Q6ZUB1 1445 aa20.83■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 10.8 ms