RNA–Protein interactions for RNA: ENST00000601656.5

FARP1-235, Transcript of FERM, ARH/RhoGEF and pleckstrin domain protein 1, humanhuman

TSL 5

Gene FARP1, Length 806 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FARP1-235ENST00000601656 HAP1P54257 671 aaPredicted RBP17.19■□□□□ 0.34
FARP1-235ENST00000601656 POLA2Q14181 598 aa17.18■□□□□ 0.34
FARP1-235ENST00000601656 TAOK2Q9UL54 1235 aa17.18■□□□□ 0.34
FARP1-235ENST00000601656 WIZO95785 1651 aa17.16■□□□□ 0.34
FARP1-235ENST00000601656 CFTRP13569 1480 aa17.16■□□□□ 0.34
FARP1-235ENST00000601656 ZNF608Q9ULD9 1512 aaPredicted RBP17.11■□□□□ 0.33
FARP1-235ENST00000601656 ARAP1Q96P48 1450 aa17.08■□□□□ 0.32
FARP1-235ENST00000601656 IFT140Q96RY7 1462 aa17.06■□□□□ 0.32
FARP1-235ENST00000601656 VSIG10Q8N0Z9 540 aa17.05■□□□□ 0.32
FARP1-235ENST00000601656 RBM42Q9BTD8 480 aaKnown RBP17.05■□□□□ 0.32
FARP1-235ENST00000601656 ATF5Q9Y2D1 282 aaPredicted RBP17.04■□□□□ 0.32
FARP1-235ENST00000601656 CHD1O14646 1710 aa16.99■□□□□ 0.31
FARP1-235ENST00000601656 FBLN2P98095 1184 aa16.99■□□□□ 0.31
FARP1-235ENST00000601656 ZBTB12Q9Y330 459 aaPredicted RBP16.98■□□□□ 0.31
FARP1-235ENST00000601656 FBXO3Q9UK99 471 aa16.96■□□□□ 0.31
FARP1-235ENST00000601656 RSF1Q96T23 1441 aaPredicted RBP16.96■□□□□ 0.3
FARP1-235ENST00000601656 EIF4G3O43432 1585 aaKnown RBP16.95■□□□□ 0.3
FARP1-235ENST00000601656 PRDM2Q13029 1718 aa16.93■□□□□ 0.3
FARP1-235ENST00000601656 AQRO60306 1485 aaKnown RBP eCLIP16.91■□□□□ 0.3
FARP1-235ENST00000601656 TOPBP1Q92547 1522 aa16.9■□□□□ 0.3
FARP1-235ENST00000601656 TPRNQ4KMQ1 711 aa16.86■□□□□ 0.29
FARP1-235ENST00000601656 TOP2AP11388 1531 aaKnown RBP16.85■□□□□ 0.29
FARP1-235ENST00000601656 ABCC8Q09428 1581 aa16.83■□□□□ 0.28
FARP1-235ENST00000601656 POTEHQ6S545 545 aa16.82■□□□□ 0.28
FARP1-235ENST00000601656 TARBP1Q13395 1621 aaKnown RBP16.8■□□□□ 0.28
FARP1-235ENST00000601656 DNMBPQ6XZF7 1577 aa16.77■□□□□ 0.27
FARP1-235ENST00000601656 CHMP7Q8WUX9 453 aaPredicted RBP16.74■□□□□ 0.27
FARP1-235ENST00000601656 CLASP1Q7Z460 1538 aa16.74■□□□□ 0.27
FARP1-235ENST00000601656 CCDC88BA6NC98 1476 aa16.72■□□□□ 0.27
FARP1-235ENST00000601656 TDRD9Q8NDG6 1382 aaKnown RBP16.7■□□□□ 0.26
FARP1-235ENST00000601656 SYNJ1O43426 1573 aa16.69■□□□□ 0.26
FARP1-235ENST00000601656 POLA1P09884 1462 aaPredicted RBP16.68■□□□□ 0.26
FARP1-235ENST00000601656 ILDR1Q86SU0 546 aaPredicted RBP16.67■□□□□ 0.26
FARP1-235ENST00000601656 SNAPC4Q5SXM2 1469 aa16.67■□□□□ 0.26
FARP1-235ENST00000601656 RAD54L2Q9Y4B4 1467 aa16.67■□□□□ 0.26
FARP1-235ENST00000601656 VASPP50552 380 aaPredicted RBP16.66■□□□□ 0.26
FARP1-235ENST00000601656 GAPVD1Q14C86 1478 aa16.66■□□□□ 0.26
FARP1-235ENST00000601656 SOGA1O94964 1423 aa16.64■□□□□ 0.25
FARP1-235ENST00000601656 AKT1S1Q96B36 256 aa16.64■□□□□ 0.25
FARP1-235ENST00000601656 KDM2AQ9Y2K7 1162 aa16.64■□□□□ 0.25
FARP1-235ENST00000601656 PKD2Q13563 968 aa16.59■□□□□ 0.25
FARP1-235ENST00000601656 MAGI1Q96QZ7 1491 aaPredicted RBP16.58■□□□□ 0.24
FARP1-235ENST00000601656 ZBTB4Q9P1Z0 1013 aaPredicted RBP16.56■□□□□ 0.24
FARP1-235ENST00000601656 SYNJ2O15056 1496 aa16.55■□□□□ 0.24
FARP1-235ENST00000601656 IFNLR1Q8IU57 520 aaPredicted RBP16.55■□□□□ 0.24
FARP1-235ENST00000601656 CHRDL2Q6WN34 429 aa16.54■□□□□ 0.24
FARP1-235ENST00000601656 BBXQ8WY36 941 aaPredicted RBP16.54■□□□□ 0.24
FARP1-235ENST00000601656 WDR97A6NE52 1622 aa16.54■□□□□ 0.24
FARP1-235ENST00000601656 GRIN2BQ13224 1484 aa16.54■□□□□ 0.24
FARP1-235ENST00000601656 SPDYE4A6NLX3 237 aa16.53■□□□□ 0.24
FARP1-235ENST00000601656 PROM2Q8N271 834 aa16.53■□□□□ 0.24
FARP1-235ENST00000601656 DAXXQ9UER7 740 aaPredicted RBP16.49■□□□□ 0.23
FARP1-235ENST00000601656 KIF13AQ9H1H9 1805 aa16.49■□□□□ 0.23
FARP1-235ENST00000601656 FGD5Q6ZNL6 1462 aa16.48■□□□□ 0.23
FARP1-235ENST00000601656 ERCC6L2Q5T890 1561 aa16.47■□□□□ 0.23
FARP1-235ENST00000601656 KDM4FA0A1W2PPD8 638 aa16.46■□□□□ 0.23
FARP1-235ENST00000601656 TIMELESSQ9UNS1 1208 aa16.44■□□□□ 0.22
FARP1-235ENST00000601656 PBRM1Q86U86 1689 aa16.43■□□□□ 0.22
FARP1-235ENST00000601656 REM2Q8IYK8 340 aaPredicted RBP16.42■□□□□ 0.22
FARP1-235ENST00000601656 ARXQ96QS3 562 aa16.42■□□□□ 0.22
FARP1-235ENST00000601656 PAXIP1Q6ZW49 1069 aaPredicted RBP16.41■□□□□ 0.22
FARP1-235ENST00000601656 SPDYE2BA6NHP3 402 aa16.4■□□□□ 0.22
FARP1-235ENST00000601656 SPDYE6P0CI01 402 aa16.4■□□□□ 0.22
FARP1-235ENST00000601656 SPDYE2Q495Y8 402 aa16.4■□□□□ 0.22
FARP1-235ENST00000601656 FAM69CQ0P6D2 419 aa16.38■□□□□ 0.21
FARP1-235ENST00000601656 CEP170Q5SW79 1584 aa16.37■□□□□ 0.21
FARP1-235ENST00000601656 CUX1P39880 1505 aa16.36■□□□□ 0.21
FARP1-235ENST00000601656 TULP1O00294 542 aaPredicted RBP16.35■□□□□ 0.21
FARP1-235ENST00000601656 CFAP44Q96MT7 982 aa16.34■□□□□ 0.21
FARP1-235ENST00000601656 GRIN2AQ12879 1464 aa16.31■□□□□ 0.2
FARP1-235ENST00000601656 ERICH6Q7L0X2 663 aa16.3■□□□□ 0.2
FARP1-235ENST00000601656 NPM1P06748 294 aaKnown RBP eCLIP16.29■□□□□ 0.2
FARP1-235ENST00000601656 MKRN4PQ13434 485 aaPredicted RBP16.29■□□□□ 0.2
FARP1-235ENST00000601656 ABCC10Q5T3U5 1492 aa16.29■□□□□ 0.2
FARP1-235ENST00000601656 NUP160Q12769 1436 aa16.28■□□□□ 0.2
FARP1-235ENST00000601656 SHROOM2Q13796 1616 aa16.27■□□□□ 0.2
FARP1-235ENST00000601656 KDM6BO15054 1643 aa16.27■□□□□ 0.19
FARP1-235ENST00000601656 ABCA5Q8WWZ7 1642 aa16.27■□□□□ 0.19
FARP1-235ENST00000601656 GTF3C3Q9Y5Q9 886 aa16.26■□□□□ 0.19
FARP1-235ENST00000601656 ABCA10Q8WWZ4 1543 aa16.24■□□□□ 0.19
FARP1-235ENST00000601656 TSPOAP1O95153 1857 aa16.22■□□□□ 0.19
FARP1-235ENST00000601656 PRG4Q92954 1404 aaPredicted RBP16.22■□□□□ 0.19
FARP1-235ENST00000601656 PITPNM1O00562 1244 aa16.22■□□□□ 0.19
FARP1-235ENST00000601656 SPRYD3Q8NCJ5 442 aa16.22■□□□□ 0.19
FARP1-235ENST00000601656 DIP2BQ9P265 1576 aa16.21■□□□□ 0.18
FARP1-235ENST00000601656 JPH4Q96JJ6 628 aa16.2■□□□□ 0.18
FARP1-235ENST00000601656 ZNF692Q9BU19 519 aaPredicted RBP16.2■□□□□ 0.18
FARP1-235ENST00000601656 ADAMTS12P58397 1594 aa16.19■□□□□ 0.18
FARP1-235ENST00000601656 TSHZ2Q9NRE2 1034 aa16.19■□□□□ 0.18
FARP1-235ENST00000601656 ECM2O94769 699 aaPredicted RBP16.18■□□□□ 0.18
FARP1-235ENST00000601656 MAPKBP1O60336 1514 aa16.18■□□□□ 0.18
FARP1-235ENST00000601656 NBR1Q14596 966 aa16.16■□□□□ 0.18
FARP1-235ENST00000601656 FHAD1B1AJZ9 1412 aa16.15■□□□□ 0.18
FARP1-235ENST00000601656 PIP4P2Q8N4L2 257 aa16.14■□□□□ 0.17
FARP1-235ENST00000601656 SSUH2Q9Y2M2 353 aa16.14■□□□□ 0.17
FARP1-235ENST00000601656 SPOCK2Q92563 424 aa16.12■□□□□ 0.17
FARP1-235ENST00000601656 ADGRL1O94910 1474 aa16.11■□□□□ 0.17
FARP1-235ENST00000601656 HECW2Q9P2P5 1572 aa16.11■□□□□ 0.17
FARP1-235ENST00000601656 SPDYE1Q8NFV5 336 aaPredicted RBP16.1■□□□□ 0.17
FARP1-235ENST00000601656 ADCY10Q96PN6 1610 aa16.09■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms