RNA–Protein interactions for RNA: ENST00000601656.5

FARP1-235, Transcript of FERM, ARH/RhoGEF and pleckstrin domain protein 1, humanhuman

TSL 5

Gene FARP1, Length 806 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FARP1-235ENST00000601656 AEBP2Q6ZN18 517 aaPredicted RBP29.75■■■□□ 2.35
FARP1-235ENST00000601656 CHIC1Q5VXU3 224 aa28.48■■■□□ 2.15
FARP1-235ENST00000601656 SENP3Q9H4L4 574 aaPredicted RBP25.54■■□□□ 1.68
FARP1-235ENST00000601656 PHF23Q9BUL5 403 aaPredicted RBP25.15■■□□□ 1.62
FARP1-235ENST00000601656 FOXD1Q16676 465 aa23.67■■□□□ 1.38
FARP1-235ENST00000601656 PLPPR3Q6T4P5 718 aa22.87■■□□□ 1.25
FARP1-235ENST00000601656 NISCHQ9Y2I1 1504 aa22.56■■□□□ 1.2
FARP1-235ENST00000601656 MSH5O43196 834 aa22.25■■□□□ 1.15
FARP1-235ENST00000601656 PIAS4Q8N2W9 510 aaPredicted RBP22.2■■□□□ 1.14
FARP1-235ENST00000601656 PPP6R1Q9UPN7 881 aa22.17■■□□□ 1.14
FARP1-235ENST00000601656 ADRA2BP18089 450 aa22.12■■□□□ 1.13
FARP1-235ENST00000601656 POTEDQ86YR6 584 aa21.39■■□□□ 1.01
FARP1-235ENST00000601656 ABCC9O60706 1549 aa21.23■□□□□ 0.99
FARP1-235ENST00000601656 EHMT2Q96KQ7 1210 aa20.89■□□□□ 0.93
FARP1-235ENST00000601656 DNAJC5BQ9UF47 199 aa20.56■□□□□ 0.88
FARP1-235ENST00000601656 CCDC180Q9P1Z9 1646 aa20.5■□□□□ 0.87
FARP1-235ENST00000601656 SCAF1Q9H7N4 1312 aaKnown RBP20.47■□□□□ 0.87
FARP1-235ENST00000601656 KCNA4P22459 653 aa20.46■□□□□ 0.87
FARP1-235ENST00000601656 MAPK8IP2Q13387 824 aaPredicted RBP20.26■□□□□ 0.83
FARP1-235ENST00000601656 DMRT2Q9Y5R5 561 aa20.23■□□□□ 0.83
FARP1-235ENST00000601656 PPP4R3CPQ6ZMV5 832 aa20■□□□□ 0.79
FARP1-235ENST00000601656 CSRNP3Q8WYN3 585 aa20■□□□□ 0.79
FARP1-235ENST00000601656 RB1CC1Q8TDY2 1594 aa19.87■□□□□ 0.77
FARP1-235ENST00000601656 SLC4A1APQ9BWU0 796 aaKnown RBP19.77■□□□□ 0.76
FARP1-235ENST00000601656 PABPN1Q86U42 306 aaKnown RBP eCLIP19.71■□□□□ 0.75
FARP1-235ENST00000601656 SLC24A1O60721 1099 aa19.66■□□□□ 0.74
FARP1-235ENST00000601656 CNKSR2Q8WXI2 1034 aa19.66■□□□□ 0.74
FARP1-235ENST00000601656 NACADO15069 1562 aa19.57■□□□□ 0.72
FARP1-235ENST00000601656 HOXD11P31277 338 aaPredicted RBP19.54■□□□□ 0.72
FARP1-235ENST00000601656 DCAF8L2P0C7V8 631 aa19.49■□□□□ 0.71
FARP1-235ENST00000601656 UNC13AQ9UPW8 1703 aa19.45■□□□□ 0.7
FARP1-235ENST00000601656 RNF216Q9NWF9 866 aaPredicted RBP19.45■□□□□ 0.7
FARP1-235ENST00000601656 NCBP3Q53F19 620 aaKnown RBP19.39■□□□□ 0.69
FARP1-235ENST00000601656 DCAF8L1A6NGE4 600 aa19.38■□□□□ 0.69
FARP1-235ENST00000601656 DNAJC5Q9H3Z4 198 aa19.36■□□□□ 0.69
FARP1-235ENST00000601656 BICRAQ9NZM4 1560 aa19.32■□□□□ 0.68
FARP1-235ENST00000601656 CECR2Q9BXF3 1484 aa19.18■□□□□ 0.66
FARP1-235ENST00000601656 CC2D2AQ9P2K1 1620 aa19.12■□□□□ 0.65
FARP1-235ENST00000601656 AMER1Q5JTC6 1135 aaPredicted RBP19.06■□□□□ 0.64
FARP1-235ENST00000601656 MYO15BQ96JP2 1530 aa19.03■□□□□ 0.64
FARP1-235ENST00000601656 RTN4Q9NQC3 1192 aaKnown RBP19.02■□□□□ 0.64
FARP1-235ENST00000601656 CACNB1Q02641 598 aaPredicted RBP18.97■□□□□ 0.63
FARP1-235ENST00000601656 NPM3O75607 178 aaKnown RBP18.96■□□□□ 0.63
FARP1-235ENST00000601656 SHROOM4Q9ULL8 1493 aa18.92■□□□□ 0.62
FARP1-235ENST00000601656 RNF39Q9H2S5 420 aa18.92■□□□□ 0.62
FARP1-235ENST00000601656 EIF4G1Q04637 1599 aaKnown RBP18.89■□□□□ 0.62
FARP1-235ENST00000601656 ZBTB22O15209 634 aa18.87■□□□□ 0.61
FARP1-235ENST00000601656 C1QBPQ07021 282 aaKnown RBP18.73■□□□□ 0.59
FARP1-235ENST00000601656 SCRIBQ14160 1630 aa18.67■□□□□ 0.58
FARP1-235ENST00000601656 GRWD1Q9BQ67 446 aaKnown RBP eCLIP18.64■□□□□ 0.57
FARP1-235ENST00000601656 DCAF1Q9Y4B6 1507 aa18.55■□□□□ 0.56
FARP1-235ENST00000601656 CUX2O14529 1486 aa18.52■□□□□ 0.56
FARP1-235ENST00000601656 ZCCHC6Q5VYS8 1495 aaKnown RBP18.52■□□□□ 0.55
FARP1-235ENST00000601656 FOXD4L1Q9NU39 408 aa18.42■□□□□ 0.54
FARP1-235ENST00000601656 ERCC6Q03468 1493 aa18.37■□□□□ 0.53
FARP1-235ENST00000601656 TRIM41Q8WV44 630 aa18.28■□□□□ 0.52
FARP1-235ENST00000601656 U3KPZ7 1027 aaPredicted RBP18.18■□□□□ 0.5
FARP1-235ENST00000601656 NCAPD3P42695 1498 aa18.08■□□□□ 0.49
FARP1-235ENST00000601656 SLC4A2P04920 1241 aa18.05■□□□□ 0.48
FARP1-235ENST00000601656 NESP48681 1621 aa18.04■□□□□ 0.48
FARP1-235ENST00000601656 FKBP8Q14318 412 aa17.96■□□□□ 0.47
FARP1-235ENST00000601656 THOC2Q8NI27 1593 aaKnown RBP17.93■□□□□ 0.46
FARP1-235ENST00000601656 ATAD2BQ9ULI0 1458 aa17.93■□□□□ 0.46
FARP1-235ENST00000601656 APLP2Q06481 763 aa17.91■□□□□ 0.46
FARP1-235ENST00000601656 CAPN15O75808 1086 aa17.9■□□□□ 0.46
FARP1-235ENST00000601656 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP17.89■□□□□ 0.45
FARP1-235ENST00000601656 HNRNPUL2Q1KMD3 747 aaKnown RBP17.89■□□□□ 0.45
FARP1-235ENST00000601656 HMGXB3Q12766 1538 aa17.85■□□□□ 0.45
FARP1-235ENST00000601656 SPINK5Q9NQ38 1064 aaPredicted RBP17.85■□□□□ 0.45
FARP1-235ENST00000601656 SMARCA2P51531 1590 aa17.83■□□□□ 0.45
FARP1-235ENST00000601656 KIF21AQ7Z4S6 1674 aa17.78■□□□□ 0.44
FARP1-235ENST00000601656 LAMC3Q9Y6N6 1575 aa17.77■□□□□ 0.44
FARP1-235ENST00000601656 SAMD1Q6SPF0 538 aaPredicted RBP17.75■□□□□ 0.43
FARP1-235ENST00000601656 DSG3P32926 999 aa17.74■□□□□ 0.43
FARP1-235ENST00000601656 SMARCA4P51532 1647 aa17.73■□□□□ 0.43
FARP1-235ENST00000601656 BAZ1BQ9UIG0 1483 aaKnown RBP17.73■□□□□ 0.43
FARP1-235ENST00000601656 PDS5BQ9NTI5 1447 aa17.72■□□□□ 0.43
FARP1-235ENST00000601656 ATXN8OSP0DMR3 200 aa17.69■□□□□ 0.42
FARP1-235ENST00000601656 ZNF219Q9P2Y4 722 aaPredicted RBP17.68■□□□□ 0.42
FARP1-235ENST00000601656 OSCARQ8IYS5 282 aa17.67■□□□□ 0.42
FARP1-235ENST00000601656 BAZ1AQ9NRL2 1556 aaPredicted RBP17.63■□□□□ 0.41
FARP1-235ENST00000601656 MYCNP04198 464 aaPredicted RBP17.62■□□□□ 0.41
FARP1-235ENST00000601656 TRHP20396 242 aaPredicted RBP17.62■□□□□ 0.41
FARP1-235ENST00000601656 MRC2Q9UBG0 1479 aa17.58■□□□□ 0.41
FARP1-235ENST00000601656 WDR62O43379 1518 aa17.54■□□□□ 0.4
FARP1-235ENST00000601656 PEG3Q9GZU2 1588 aa17.53■□□□□ 0.4
FARP1-235ENST00000601656 CADPSQ9ULU8 1353 aa17.52■□□□□ 0.39
FARP1-235ENST00000601656 PLCB2Q00722 1185 aa17.48■□□□□ 0.39
FARP1-235ENST00000601656 RIMBP3CA6NJZ7 1639 aa17.44■□□□□ 0.38
FARP1-235ENST00000601656 RIMBP3BA6NNM3 1639 aa17.44■□□□□ 0.38
FARP1-235ENST00000601656 RIMBP3Q9UFD9 1639 aa17.44■□□□□ 0.38
FARP1-235ENST00000601656 ABCB7O75027 752 aa17.42■□□□□ 0.38
FARP1-235ENST00000601656 CEP164Q9UPV0 1460 aa17.38■□□□□ 0.37
FARP1-235ENST00000601656 MROH2BQ7Z745 1585 aa17.38■□□□□ 0.37
FARP1-235ENST00000601656 BCANQ96GW7 911 aa17.33■□□□□ 0.36
FARP1-235ENST00000601656 CYB5RLQ6IPT4 315 aa17.32■□□□□ 0.36
FARP1-235ENST00000601656 FANCD2Q9BXW9 1451 aa17.31■□□□□ 0.36
FARP1-235ENST00000601656 ARHGEF11O15085 1522 aa17.3■□□□□ 0.36
FARP1-235ENST00000601656 PRKCSHP14314 528 aaPredicted RBP17.24■□□□□ 0.35
FARP1-235ENST00000601656 URB2Q14146 1524 aaKnown RBP17.21■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 44.4 ms