RNA–Protein interactions for RNA: ENST00000601236.1

U2AF1L4-221, Transcript of U2 small nuclear RNA auxiliary factor 1 like 4, humanhuman

TSL 3

Gene U2AF1L4, Length 455 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
U2AF1L4-221ENST00000601236 PRDM2Q13029 1718 aa16.56■□□□□ 0.24
U2AF1L4-221ENST00000601236 RAB3GAP2Q9H2M9 1393 aa16.55■□□□□ 0.24
U2AF1L4-221ENST00000601236 LRRC9Q6ZRR7 1453 aa16.54■□□□□ 0.24
U2AF1L4-221ENST00000601236 CFAP43Q8NDM7 1665 aa16.53■□□□□ 0.24
U2AF1L4-221ENST00000601236 EFCAB5A4FU69 1503 aa16.53■□□□□ 0.24
U2AF1L4-221ENST00000601236 CUX1P39880 1505 aa16.5■□□□□ 0.23
U2AF1L4-221ENST00000601236 FANCIQ9NVI1 1328 aa16.5■□□□□ 0.23
U2AF1L4-221ENST00000601236 ANP32CO43423 234 aa16.49■□□□□ 0.23
U2AF1L4-221ENST00000601236 PPP1R15AO75807 674 aaPredicted RBP16.48■□□□□ 0.23
U2AF1L4-221ENST00000601236 KANK4Q5T7N3 995 aaPredicted RBP16.47■□□□□ 0.23
U2AF1L4-221ENST00000601236 FYCO1Q9BQS8 1478 aa16.47■□□□□ 0.23
U2AF1L4-221ENST00000601236 THOC2Q8NI27 1593 aaKnown RBP16.39■□□□□ 0.21
U2AF1L4-221ENST00000601236 CASKIN1Q8WXD9 1431 aa16.39■□□□□ 0.21
U2AF1L4-221ENST00000601236 IGF1RP08069 1367 aa16.38■□□□□ 0.21
U2AF1L4-221ENST00000601236 FKBP8Q14318 412 aa16.38■□□□□ 0.21
U2AF1L4-221ENST00000601236 RBM19Q9Y4C8 960 aaKnown RBP16.38■□□□□ 0.21
U2AF1L4-221ENST00000601236 UACAQ9BZF9 1416 aa16.37■□□□□ 0.21
U2AF1L4-221ENST00000601236 FGD5Q6ZNL6 1462 aa16.37■□□□□ 0.21
U2AF1L4-221ENST00000601236 WDR97A6NE52 1622 aa16.37■□□□□ 0.21
U2AF1L4-221ENST00000601236 CCDC18Q5T9S5 1454 aa16.36■□□□□ 0.21
U2AF1L4-221ENST00000601236 FMN1Q68DA7 1419 aa16.36■□□□□ 0.21
U2AF1L4-221ENST00000601236 AKNAQ7Z591 1439 aa16.36■□□□□ 0.21
U2AF1L4-221ENST00000601236 BCL11AQ9H165 835 aa16.35■□□□□ 0.21
U2AF1L4-221ENST00000601236 CARMIL1Q5VZK9 1371 aa16.35■□□□□ 0.21
U2AF1L4-221ENST00000601236 HFM1A2PYH4 1435 aa16.35■□□□□ 0.21
U2AF1L4-221ENST00000601236 CC2D2AQ9P2K1 1620 aa16.34■□□□□ 0.21
U2AF1L4-221ENST00000601236 CDK11AQ9UQ88 783 aaPredicted RBP16.34■□□□□ 0.21
U2AF1L4-221ENST00000601236 CUL7Q14999 1698 aa16.32■□□□□ 0.2
U2AF1L4-221ENST00000601236 TONSLQ96HA7 1378 aa16.31■□□□□ 0.2
U2AF1L4-221ENST00000601236 PHLDB1Q86UU1 1377 aa16.29■□□□□ 0.2
U2AF1L4-221ENST00000601236 DDX10Q13206 875 aaKnown RBP16.27■□□□□ 0.2
U2AF1L4-221ENST00000601236 PABPN1Q86U42 306 aaKnown RBP eCLIP16.26■□□□□ 0.19
U2AF1L4-221ENST00000601236 FGD6Q6ZV73 1430 aa16.26■□□□□ 0.19
U2AF1L4-221ENST00000601236 KIF21AQ7Z4S6 1674 aa16.25■□□□□ 0.19
U2AF1L4-221ENST00000601236 PPP4R2Q9NY27 417 aa16.24■□□□□ 0.19
U2AF1L4-221ENST00000601236 PCF11O94913 1555 aaKnown RBP16.24■□□□□ 0.19
U2AF1L4-221ENST00000601236 CADPSQ9ULU8 1353 aa16.23■□□□□ 0.19
U2AF1L4-221ENST00000601236 NCOA2Q15596 1464 aa16.22■□□□□ 0.19
U2AF1L4-221ENST00000601236 ERICH6Q7L0X2 663 aa16.22■□□□□ 0.19
U2AF1L4-221ENST00000601236 ABCA10Q8WWZ4 1543 aa16.21■□□□□ 0.19
U2AF1L4-221ENST00000601236 PTPN23Q9H3S7 1636 aa16.19■□□□□ 0.18
U2AF1L4-221ENST00000601236 EHBP1L1Q8N3D4 1523 aa16.18■□□□□ 0.18
U2AF1L4-221ENST00000601236 HECW1Q76N89 1606 aa16.16■□□□□ 0.18
U2AF1L4-221ENST00000601236 CTTNBP2Q8WZ74 1663 aa16.16■□□□□ 0.18
U2AF1L4-221ENST00000601236 MYOM3Q5VTT5 1437 aa16.15■□□□□ 0.18
U2AF1L4-221ENST00000601236 TCOF1Q13428 1488 aaKnown RBP16.15■□□□□ 0.18
U2AF1L4-221ENST00000601236 DNMBPQ6XZF7 1577 aa16.14■□□□□ 0.17
U2AF1L4-221ENST00000601236 FAM50AQ14320 339 aaKnown RBP16.14■□□□□ 0.17
U2AF1L4-221ENST00000601236 ARID4BQ4LE39 1312 aaPredicted RBP16.14■□□□□ 0.17
U2AF1L4-221ENST00000601236 ZBED9Q6R2W3 1325 aa16.14■□□□□ 0.17
U2AF1L4-221ENST00000601236 SUPT6HQ7KZ85 1726 aaKnown RBP16.14■□□□□ 0.17
U2AF1L4-221ENST00000601236 CNTLNQ9NXG0 1405 aa16.13■□□□□ 0.17
U2AF1L4-221ENST00000601236 ABCA5Q8WWZ7 1642 aa16.12■□□□□ 0.17
U2AF1L4-221ENST00000601236 MIA2Q96PC5 1412 aa16.12■□□□□ 0.17
U2AF1L4-221ENST00000601236 GCC2Q8IWJ2 1684 aa16.12■□□□□ 0.17
U2AF1L4-221ENST00000601236 DNAJC5Q9H3Z4 198 aa16.12■□□□□ 0.17
U2AF1L4-221ENST00000601236 ARHGEF11O15085 1522 aa16.12■□□□□ 0.17
U2AF1L4-221ENST00000601236 SAMD9Q5K651 1589 aa16.12■□□□□ 0.17
U2AF1L4-221ENST00000601236 NAIPQ13075 1403 aa16.11■□□□□ 0.17
U2AF1L4-221ENST00000601236 SNAPC4Q5SXM2 1469 aa16.11■□□□□ 0.17
U2AF1L4-221ENST00000601236 RANGAP1P46060 587 aaPredicted RBP16.1■□□□□ 0.17
U2AF1L4-221ENST00000601236 EIF4G2P78344 907 aaKnown RBP eCLIP16.09■□□□□ 0.17
U2AF1L4-221ENST00000601236 KCNH8Q96L42 1107 aa16.09■□□□□ 0.17
U2AF1L4-221ENST00000601236 MTUS2Q5JR59 1369 aa16.09■□□□□ 0.17
U2AF1L4-221ENST00000601236 ITGAEP38570 1179 aa16.08■□□□□ 0.16
U2AF1L4-221ENST00000601236 SIN3AQ96ST3 1273 aa16.08■□□□□ 0.16
U2AF1L4-221ENST00000601236 KDM5BQ9UGL1 1544 aa16.08■□□□□ 0.16
U2AF1L4-221ENST00000601236 POLR1AO95602 1720 aaPredicted RBP16.07■□□□□ 0.16
U2AF1L4-221ENST00000601236 NCOA1Q15788 1441 aa16.05■□□□□ 0.16
U2AF1L4-221ENST00000601236 ROCK1Q13464 1354 aa16.05■□□□□ 0.16
U2AF1L4-221ENST00000601236 KTN1Q86UP2 1357 aaKnown RBP16.05■□□□□ 0.16
U2AF1L4-221ENST00000601236 UGGT2Q9NYU1 1516 aa16.04■□□□□ 0.16
U2AF1L4-221ENST00000601236 GRIN2BQ13224 1484 aa16.04■□□□□ 0.16
U2AF1L4-221ENST00000601236 HNRNPUQ00839 825 aaKnown RBP eCLIP16.04■□□□□ 0.16
U2AF1L4-221ENST00000601236 BCANQ96GW7 911 aa16.04■□□□□ 0.16
U2AF1L4-221ENST00000601236 TRIM52Q96A61 297 aa16.03■□□□□ 0.16
U2AF1L4-221ENST00000601236 SMG6Q86US8 1419 aaKnown RBP16.01■□□□□ 0.15
U2AF1L4-221ENST00000601236 ROCK2O75116 1388 aaKnown RBP16■□□□□ 0.15
U2AF1L4-221ENST00000601236 RNF123Q5XPI4 1314 aa15.99■□□□□ 0.15
U2AF1L4-221ENST00000601236 FHOD3Q2V2M9 1422 aa15.98■□□□□ 0.15
U2AF1L4-221ENST00000601236 FANCD2Q9BXW9 1451 aa15.97■□□□□ 0.15
U2AF1L4-221ENST00000601236 MSH5O43196 834 aa15.97■□□□□ 0.15
U2AF1L4-221ENST00000601236 USP35Q9P2H5 1018 aa15.97■□□□□ 0.15
U2AF1L4-221ENST00000601236 CCDC7Q96M83 1385 aa15.97■□□□□ 0.15
U2AF1L4-221ENST00000601236 PRKRIP1Q9H875 184 aaPredicted RBP15.96■□□□□ 0.15
U2AF1L4-221ENST00000601236 INSRP06213 1382 aa15.96■□□□□ 0.15
U2AF1L4-221ENST00000601236 RPRD2Q5VT52 1461 aaKnown RBP15.96■□□□□ 0.14
U2AF1L4-221ENST00000601236 WASHC2AQ641Q2 1341 aa15.94■□□□□ 0.14
U2AF1L4-221ENST00000601236 NOP58Q9Y2X3 529 aaKnown RBP15.94■□□□□ 0.14
U2AF1L4-221ENST00000601236 TOPBP1Q92547 1522 aa15.94■□□□□ 0.14
U2AF1L4-221ENST00000601236 POLA1P09884 1462 aaPredicted RBP15.93■□□□□ 0.14
U2AF1L4-221ENST00000601236 ZMYM4Q5VZL5 1548 aa15.93■□□□□ 0.14
U2AF1L4-221ENST00000601236 ANP32AP39687 249 aaKnown RBP15.92■□□□□ 0.14
U2AF1L4-221ENST00000601236 HSPA5P11021 654 aaKnown RBP15.91■□□□□ 0.14
U2AF1L4-221ENST00000601236 PTPRKQ15262 1439 aa15.91■□□□□ 0.14
U2AF1L4-221ENST00000601236 SPATA31E1Q6ZUB1 1445 aa15.91■□□□□ 0.14
U2AF1L4-221ENST00000601236 LAMC3Q9Y6N6 1575 aa15.88■□□□□ 0.13
U2AF1L4-221ENST00000601236 NUDCQ9Y266 331 aa15.86■□□□□ 0.13
U2AF1L4-221ENST00000601236 ANKRD30BQ9BXX2 1392 aa15.86■□□□□ 0.13
U2AF1L4-221ENST00000601236 MS4A1P11836 297 aa15.85■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 7.1 ms