RNA–Protein interactions for RNA: ENST00000601236.1

U2AF1L4-221, Transcript of U2 small nuclear RNA auxiliary factor 1 like 4, humanhuman

TSL 3

Gene U2AF1L4, Length 455 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
U2AF1L4-221ENST00000601236 NISCHQ9Y2I1 1504 aa23.08■■□□□ 1.28
U2AF1L4-221ENST00000601236 CCDC180Q9P1Z9 1646 aa19.73■□□□□ 0.75
U2AF1L4-221ENST00000601236 ZCCHC6Q5VYS8 1495 aaKnown RBP19.67■□□□□ 0.74
U2AF1L4-221ENST00000601236 HRCP23327 699 aa19.49■□□□□ 0.71
U2AF1L4-221ENST00000601236 DCAF1Q9Y4B6 1507 aa19.39■□□□□ 0.69
U2AF1L4-221ENST00000601236 CHIC1Q5VXU3 224 aa19.18■□□□□ 0.66
U2AF1L4-221ENST00000601236 SUPT5HO00267 1087 aaKnown RBP19.16■□□□□ 0.66
U2AF1L4-221ENST00000601236 SHROOM4Q9ULL8 1493 aa19.16■□□□□ 0.66
U2AF1L4-221ENST00000601236 PELP1Q8IZL8 1130 aaKnown RBP19.12■□□□□ 0.65
U2AF1L4-221ENST00000601236 ZEB1P37275 1124 aaPredicted RBP19.01■□□□□ 0.63
U2AF1L4-221ENST00000601236 MYO15BQ96JP2 1530 aa18.94■□□□□ 0.62
U2AF1L4-221ENST00000601236 TRIM26Q12899 539 aaPredicted RBP18.82■□□□□ 0.6
U2AF1L4-221ENST00000601236 PCGF6Q9BYE7 350 aa18.8■□□□□ 0.6
U2AF1L4-221ENST00000601236 ABCC9O60706 1549 aa18.63■□□□□ 0.57
U2AF1L4-221ENST00000601236 MYT1Q01538 1121 aa18.6■□□□□ 0.57
U2AF1L4-221ENST00000601236 RB1CC1Q8TDY2 1594 aa18.39■□□□□ 0.53
U2AF1L4-221ENST00000601236 PPARGC1BQ86YN6 1023 aaKnown RBP18.31■□□□□ 0.52
U2AF1L4-221ENST00000601236 RSF1Q96T23 1441 aaPredicted RBP18.3■□□□□ 0.52
U2AF1L4-221ENST00000601236 LOC105371045A0A1W2PR82 267 aa18.22■□□□□ 0.51
U2AF1L4-221ENST00000601236 DCAF8L2P0C7V8 631 aa18.22■□□□□ 0.51
U2AF1L4-221ENST00000601236 TRIM41Q8WV44 630 aa18.18■□□□□ 0.5
U2AF1L4-221ENST00000601236 NACADO15069 1562 aa18.09■□□□□ 0.49
U2AF1L4-221ENST00000601236 CENPBP07199 599 aaPredicted RBP18.03■□□□□ 0.48
U2AF1L4-221ENST00000601236 WRNQ14191 1432 aaPredicted RBP eCLIP18.03■□□□□ 0.48
U2AF1L4-221ENST00000601236 EEA1Q15075 1411 aa17.95■□□□□ 0.46
U2AF1L4-221ENST00000601236 SCAF1Q9H7N4 1312 aaKnown RBP17.94■□□□□ 0.46
U2AF1L4-221ENST00000601236 ACIN1Q9UKV3 1341 aaKnown RBP17.93■□□□□ 0.46
U2AF1L4-221ENST00000601236 SCRIBQ14160 1630 aa17.9■□□□□ 0.46
U2AF1L4-221ENST00000601236 BAZ1AQ9NRL2 1556 aaPredicted RBP17.87■□□□□ 0.45
U2AF1L4-221ENST00000601236 CLSPNQ9HAW4 1339 aa17.84■□□□□ 0.45
U2AF1L4-221ENST00000601236 EIF4G1Q04637 1599 aaKnown RBP17.8■□□□□ 0.44
U2AF1L4-221ENST00000601236 CCER1Q8TC90 406 aaPredicted RBP17.73■□□□□ 0.43
U2AF1L4-221ENST00000601236 TNIKQ9UKE5 1360 aa17.73■□□□□ 0.43
U2AF1L4-221ENST00000601236 MROH2BQ7Z745 1585 aa17.7■□□□□ 0.42
U2AF1L4-221ENST00000601236 DIEXFQ68CQ4 756 aaKnown RBP17.69■□□□□ 0.42
U2AF1L4-221ENST00000601236 TOP2AP11388 1531 aaKnown RBP17.67■□□□□ 0.42
U2AF1L4-221ENST00000601236 CECR2Q9BXF3 1484 aa17.57■□□□□ 0.4
U2AF1L4-221ENST00000601236 ZNF316A6NFI3 1004 aaPredicted RBP17.57■□□□□ 0.4
U2AF1L4-221ENST00000601236 CEP162Q5TB80 1403 aa17.56■□□□□ 0.4
U2AF1L4-221ENST00000601236 NEUROD1Q13562 356 aa17.56■□□□□ 0.4
U2AF1L4-221ENST00000601236 WIZO95785 1651 aa17.55■□□□□ 0.4
U2AF1L4-221ENST00000601236 GOLGA3Q08378 1498 aa17.52■□□□□ 0.4
U2AF1L4-221ENST00000601236 FAM9AQ8IZU1 332 aaPredicted RBP17.52■□□□□ 0.4
U2AF1L4-221ENST00000601236 TTBK1Q5TCY1 1321 aaPredicted RBP17.5■□□□□ 0.39
U2AF1L4-221ENST00000601236 GTF3C3Q9Y5Q9 886 aa17.5■□□□□ 0.39
U2AF1L4-221ENST00000601236 BAZ1BQ9UIG0 1483 aaKnown RBP17.46■□□□□ 0.39
U2AF1L4-221ENST00000601236 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP17.45■□□□□ 0.38
U2AF1L4-221ENST00000601236 KIF21BO75037 1637 aa17.44■□□□□ 0.38
U2AF1L4-221ENST00000601236 SMARCA4P51532 1647 aa17.44■□□□□ 0.38
U2AF1L4-221ENST00000601236 SMARCA2P51531 1590 aa17.43■□□□□ 0.38
U2AF1L4-221ENST00000601236 CEP164Q9UPV0 1460 aa17.43■□□□□ 0.38
U2AF1L4-221ENST00000601236 CSRNP3Q8WYN3 585 aa17.41■□□□□ 0.38
U2AF1L4-221ENST00000601236 PEG3Q9GZU2 1588 aa17.38■□□□□ 0.37
U2AF1L4-221ENST00000601236 CCDC88BA6NC98 1476 aa17.37■□□□□ 0.37
U2AF1L4-221ENST00000601236 VPS8Q8N3P4 1428 aa17.29■□□□□ 0.36
U2AF1L4-221ENST00000601236 ABCC8Q09428 1581 aa17.2■□□□□ 0.34
U2AF1L4-221ENST00000601236 SOGA1O94964 1423 aa17.2■□□□□ 0.34
U2AF1L4-221ENST00000601236 CLIP1P30622 1438 aa17.19■□□□□ 0.34
U2AF1L4-221ENST00000601236 APLP2Q06481 763 aa17.18■□□□□ 0.34
U2AF1L4-221ENST00000601236 ERICH3Q5RHP9 1530 aa17.17■□□□□ 0.34
U2AF1L4-221ENST00000601236 UBTFP17480 764 aaKnown RBP17.16■□□□□ 0.34
U2AF1L4-221ENST00000601236 CUX2O14529 1486 aa17.14■□□□□ 0.33
U2AF1L4-221ENST00000601236 MIER1Q8N108 512 aa17.05■□□□□ 0.32
U2AF1L4-221ENST00000601236 TIMELESSQ9UNS1 1208 aa17.02■□□□□ 0.32
U2AF1L4-221ENST00000601236 RRBP1Q9P2E9 1410 aaKnown RBP17.02■□□□□ 0.31
U2AF1L4-221ENST00000601236 MAP3K1Q13233 1512 aa17.01■□□□□ 0.31
U2AF1L4-221ENST00000601236 TOP2BQ02880 1626 aa16.99■□□□□ 0.31
U2AF1L4-221ENST00000601236 BIVM-ERCC5R4GMW8 1640 aa16.96■□□□□ 0.31
U2AF1L4-221ENST00000601236 SYNJ1O43426 1573 aa16.96■□□□□ 0.31
U2AF1L4-221ENST00000601236 DHX57Q6P158 1386 aaKnown RBP16.95■□□□□ 0.3
U2AF1L4-221ENST00000601236 UNC13AQ9UPW8 1703 aa16.95■□□□□ 0.3
U2AF1L4-221ENST00000601236 RUSC2Q8N2Y8 1516 aa16.95■□□□□ 0.3
U2AF1L4-221ENST00000601236 PRXQ9BXM0 1461 aa16.94■□□□□ 0.3
U2AF1L4-221ENST00000601236 EHMT2Q96KQ7 1210 aa16.94■□□□□ 0.3
U2AF1L4-221ENST00000601236 SUPT16HQ9Y5B9 1047 aaKnown RBP16.87■□□□□ 0.29
U2AF1L4-221ENST00000601236 ATAD2BQ9ULI0 1458 aa16.86■□□□□ 0.29
U2AF1L4-221ENST00000601236 RAPGEF2Q9Y4G8 1499 aa16.86■□□□□ 0.29
U2AF1L4-221ENST00000601236 HNRNPUL2Q1KMD3 747 aaKnown RBP16.84■□□□□ 0.29
U2AF1L4-221ENST00000601236 YTHDC1Q96MU7 727 aaKnown RBP16.84■□□□□ 0.29
U2AF1L4-221ENST00000601236 ANP32EQ9BTT0 268 aa16.82■□□□□ 0.28
U2AF1L4-221ENST00000601236 BICRAQ9NZM4 1560 aa16.81■□□□□ 0.28
U2AF1L4-221ENST00000601236 CCNB3Q8WWL7 1395 aa16.79■□□□□ 0.28
U2AF1L4-221ENST00000601236 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP16.79■□□□□ 0.28
U2AF1L4-221ENST00000601236 KIF27Q86VH2 1401 aa16.79■□□□□ 0.28
U2AF1L4-221ENST00000601236 MYT1LQ9UL68 1186 aa16.78■□□□□ 0.28
U2AF1L4-221ENST00000601236 ARAP1Q96P48 1450 aa16.78■□□□□ 0.28
U2AF1L4-221ENST00000601236 HMGXB3Q12766 1538 aa16.76■□□□□ 0.27
U2AF1L4-221ENST00000601236 CCER2I3L3R5 266 aa16.76■□□□□ 0.27
U2AF1L4-221ENST00000601236 ERICH6BQ5W0A0 696 aa16.73■□□□□ 0.27
U2AF1L4-221ENST00000601236 TSHZ2Q9NRE2 1034 aa16.68■□□□□ 0.26
U2AF1L4-221ENST00000601236 FHAD1B1AJZ9 1412 aa16.68■□□□□ 0.26
U2AF1L4-221ENST00000601236 NEFLP07196 543 aa16.67■□□□□ 0.26
U2AF1L4-221ENST00000601236 DNAJC5BQ9UF47 199 aa16.65■□□□□ 0.26
U2AF1L4-221ENST00000601236 NCAPD3P42695 1498 aa16.65■□□□□ 0.26
U2AF1L4-221ENST00000601236 SETD5Q9C0A6 1442 aa16.64■□□□□ 0.25
U2AF1L4-221ENST00000601236 TIAM1Q13009 1591 aa16.61■□□□□ 0.25
U2AF1L4-221ENST00000601236 ARHGAP35Q9NRY4 1499 aa16.59■□□□□ 0.25
U2AF1L4-221ENST00000601236 AQRO60306 1485 aaKnown RBP eCLIP16.58■□□□□ 0.24
U2AF1L4-221ENST00000601236 MAPKBP1O60336 1514 aa16.58■□□□□ 0.24
U2AF1L4-221ENST00000601236 CFTRP13569 1480 aa16.56■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms