RNA–Protein interactions for RNA: ENST00000599188.5

PDE4C-214, Transcript of phosphodiesterase 4C, humanhuman

TSL 5

Gene PDE4C, Length 2,101 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE4C-214ENST00000599188 ARHGAP35Q9NRY4 1499 aa18.53■□□□□ 0.56
PDE4C-214ENST00000599188 WDR97A6NE52 1622 aa18.52■□□□□ 0.56
PDE4C-214ENST00000599188 CARMIL1Q5VZK9 1371 aa18.52■□□□□ 0.55
PDE4C-214ENST00000599188 CHD1O14646 1710 aa18.49■□□□□ 0.55
PDE4C-214ENST00000599188 SNAPC4Q5SXM2 1469 aa18.48■□□□□ 0.55
PDE4C-214ENST00000599188 ABCA10Q8WWZ4 1543 aa18.47■□□□□ 0.55
PDE4C-214ENST00000599188 GAPVD1Q14C86 1478 aa18.46■□□□□ 0.55
PDE4C-214ENST00000599188 KANK4Q5T7N3 995 aaPredicted RBP18.46■□□□□ 0.55
PDE4C-214ENST00000599188 PBRM1Q86U86 1689 aa18.45■□□□□ 0.54
PDE4C-214ENST00000599188 GRIN2BQ13224 1484 aa18.43■□□□□ 0.54
PDE4C-214ENST00000599188 ABCA5Q8WWZ7 1642 aa18.43■□□□□ 0.54
PDE4C-214ENST00000599188 CHMP7Q8WUX9 453 aaPredicted RBP18.41■□□□□ 0.54
PDE4C-214ENST00000599188 MAGI1Q96QZ7 1491 aaPredicted RBP18.36■□□□□ 0.53
PDE4C-214ENST00000599188 RRBP1Q9P2E9 1410 aaKnown RBP18.36■□□□□ 0.53
PDE4C-214ENST00000599188 CUL7Q14999 1698 aa18.33■□□□□ 0.52
PDE4C-214ENST00000599188 MAP3K1Q13233 1512 aa18.32■□□□□ 0.52
PDE4C-214ENST00000599188 SYNJ2O15056 1496 aa18.32■□□□□ 0.52
PDE4C-214ENST00000599188 TIAM1Q13009 1591 aa18.3■□□□□ 0.52
PDE4C-214ENST00000599188 DIEXFQ68CQ4 756 aaKnown RBP18.29■□□□□ 0.52
PDE4C-214ENST00000599188 FHAD1B1AJZ9 1412 aa18.28■□□□□ 0.52
PDE4C-214ENST00000599188 CCNB3Q8WWL7 1395 aa18.28■□□□□ 0.52
PDE4C-214ENST00000599188 RIMBP3CA6NJZ7 1639 aa18.27■□□□□ 0.51
PDE4C-214ENST00000599188 RIMBP3BA6NNM3 1639 aa18.27■□□□□ 0.51
PDE4C-214ENST00000599188 RIMBP3Q9UFD9 1639 aa18.27■□□□□ 0.51
PDE4C-214ENST00000599188 ADAMTS12P58397 1594 aa18.26■□□□□ 0.51
PDE4C-214ENST00000599188 ZNF316A6NFI3 1004 aaPredicted RBP18.25■□□□□ 0.51
PDE4C-214ENST00000599188 EFCAB5A4FU69 1503 aa18.24■□□□□ 0.51
PDE4C-214ENST00000599188 ARHGEF11O15085 1522 aa18.23■□□□□ 0.51
PDE4C-214ENST00000599188 LRRC9Q6ZRR7 1453 aa18.23■□□□□ 0.51
PDE4C-214ENST00000599188 PCF11O94913 1555 aaKnown RBP18.23■□□□□ 0.51
PDE4C-214ENST00000599188 CTTNBP2Q8WZ74 1663 aa18.23■□□□□ 0.51
PDE4C-214ENST00000599188 P3H3Q8IVL6 736 aa18.22■□□□□ 0.51
PDE4C-214ENST00000599188 GRIN2AQ12879 1464 aa18.22■□□□□ 0.51
PDE4C-214ENST00000599188 CLSPNQ9HAW4 1339 aa18.22■□□□□ 0.51
PDE4C-214ENST00000599188 DHX57Q6P158 1386 aaKnown RBP18.22■□□□□ 0.51
PDE4C-214ENST00000599188 FHOD3Q2V2M9 1422 aa18.21■□□□□ 0.51
PDE4C-214ENST00000599188 CFAP43Q8NDM7 1665 aa18.2■□□□□ 0.5
PDE4C-214ENST00000599188 CLASP1Q7Z460 1538 aa18.19■□□□□ 0.5
PDE4C-214ENST00000599188 CYB5RLQ6IPT4 315 aa18.18■□□□□ 0.5
PDE4C-214ENST00000599188 FYCO1Q9BQS8 1478 aa18.17■□□□□ 0.5
PDE4C-214ENST00000599188 CEP170Q5SW79 1584 aa18.17■□□□□ 0.5
PDE4C-214ENST00000599188 CASKIN1Q8WXD9 1431 aa18.15■□□□□ 0.5
PDE4C-214ENST00000599188 PHLDB1Q86UU1 1377 aa18.14■□□□□ 0.49
PDE4C-214ENST00000599188 ITGAEP38570 1179 aa18.13■□□□□ 0.49
PDE4C-214ENST00000599188 ATP1B4Q9UN42 357 aaPredicted RBP18.12■□□□□ 0.49
PDE4C-214ENST00000599188 FMN1Q68DA7 1419 aa18.11■□□□□ 0.49
PDE4C-214ENST00000599188 NUP160Q12769 1436 aa18.1■□□□□ 0.49
PDE4C-214ENST00000599188 SAMD9Q5K651 1589 aa18.08■□□□□ 0.49
PDE4C-214ENST00000599188 ERCC6L2Q5T890 1561 aa18.08■□□□□ 0.48
PDE4C-214ENST00000599188 RAB3GAP2Q9H2M9 1393 aa18.05■□□□□ 0.48
PDE4C-214ENST00000599188 FAM50AQ14320 339 aaKnown RBP18.02■□□□□ 0.48
PDE4C-214ENST00000599188 SETD5Q9C0A6 1442 aa18.01■□□□□ 0.47
PDE4C-214ENST00000599188 SCAF1Q9H7N4 1312 aaKnown RBP18.01■□□□□ 0.47
PDE4C-214ENST00000599188 JPH4Q96JJ6 628 aa18■□□□□ 0.47
PDE4C-214ENST00000599188 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP17.98■□□□□ 0.47
PDE4C-214ENST00000599188 ACIN1Q9UKV3 1341 aaKnown RBP17.97■□□□□ 0.47
PDE4C-214ENST00000599188 PRG4Q92954 1404 aaPredicted RBP17.97■□□□□ 0.47
PDE4C-214ENST00000599188 SHROOM2Q13796 1616 aa17.96■□□□□ 0.47
PDE4C-214ENST00000599188 MTUS2Q5JR59 1369 aa17.95■□□□□ 0.46
PDE4C-214ENST00000599188 MAPKBP1O60336 1514 aa17.95■□□□□ 0.46
PDE4C-214ENST00000599188 LRRIQ1Q96JM4 1722 aa17.95■□□□□ 0.46
PDE4C-214ENST00000599188 NEUROD1Q13562 356 aa17.94■□□□□ 0.46
PDE4C-214ENST00000599188 CENPBP07199 599 aaPredicted RBP17.93■□□□□ 0.46
PDE4C-214ENST00000599188 FGD6Q6ZV73 1430 aa17.93■□□□□ 0.46
PDE4C-214ENST00000599188 KIAA0586Q9BVV6 1533 aa17.92■□□□□ 0.46
PDE4C-214ENST00000599188 MIER1Q8N108 512 aa17.92■□□□□ 0.46
PDE4C-214ENST00000599188 IQGAP2Q13576 1575 aa17.91■□□□□ 0.46
PDE4C-214ENST00000599188 EHBP1L1Q8N3D4 1523 aa17.88■□□□□ 0.45
PDE4C-214ENST00000599188 NCOA2Q15596 1464 aa17.87■□□□□ 0.45
PDE4C-214ENST00000599188 SUPT6HQ7KZ85 1726 aaKnown RBP17.86■□□□□ 0.45
PDE4C-214ENST00000599188 CCDC18Q5T9S5 1454 aa17.86■□□□□ 0.45
PDE4C-214ENST00000599188 TRHP20396 242 aaPredicted RBP17.86■□□□□ 0.45
PDE4C-214ENST00000599188 MYOM3Q5VTT5 1437 aa17.85■□□□□ 0.45
PDE4C-214ENST00000599188 HECW1Q76N89 1606 aa17.84■□□□□ 0.45
PDE4C-214ENST00000599188 MAGI3Q5TCQ9 1506 aa17.82■□□□□ 0.44
PDE4C-214ENST00000599188 UGGT2Q9NYU1 1516 aa17.81■□□□□ 0.44
PDE4C-214ENST00000599188 PTPRKQ15262 1439 aa17.8■□□□□ 0.44
PDE4C-214ENST00000599188 EPRSP07814 1512 aaKnown RBP17.79■□□□□ 0.44
PDE4C-214ENST00000599188 HFM1A2PYH4 1435 aa17.79■□□□□ 0.44
PDE4C-214ENST00000599188 YTHDC1Q96MU7 727 aaKnown RBP17.77■□□□□ 0.44
PDE4C-214ENST00000599188 SIN3AQ96ST3 1273 aa17.77■□□□□ 0.44
PDE4C-214ENST00000599188 PTPN23Q9H3S7 1636 aa17.77■□□□□ 0.43
PDE4C-214ENST00000599188 DISP1Q96F81 1524 aa17.74■□□□□ 0.43
PDE4C-214ENST00000599188 CDK13Q14004 1512 aaKnown RBP17.74■□□□□ 0.43
PDE4C-214ENST00000599188 CARMIL2Q6F5E8 1435 aa17.74■□□□□ 0.43
PDE4C-214ENST00000599188 TIMELESSQ9UNS1 1208 aa17.73■□□□□ 0.43
PDE4C-214ENST00000599188 KIAA0556O60303 1618 aa17.72■□□□□ 0.43
PDE4C-214ENST00000599188 GTF3C3Q9Y5Q9 886 aa17.72■□□□□ 0.43
PDE4C-214ENST00000599188 PTPRGP23470 1445 aa17.72■□□□□ 0.43
PDE4C-214ENST00000599188 NAIPQ13075 1403 aa17.72■□□□□ 0.43
PDE4C-214ENST00000599188 TCOF1Q13428 1488 aaKnown RBP17.72■□□□□ 0.43
PDE4C-214ENST00000599188 UACAQ9BZF9 1416 aa17.71■□□□□ 0.42
PDE4C-214ENST00000599188 ADCY10Q96PN6 1610 aa17.7■□□□□ 0.42
PDE4C-214ENST00000599188 MIA2Q96PC5 1412 aa17.67■□□□□ 0.42
PDE4C-214ENST00000599188 ARID3CA6NKF2 412 aa17.66■□□□□ 0.42
PDE4C-214ENST00000599188 NPM1P06748 294 aaKnown RBP eCLIP17.65■□□□□ 0.42
PDE4C-214ENST00000599188 NUP153P49790 1475 aaKnown RBP17.64■□□□□ 0.41
PDE4C-214ENST00000599188 RAPGEF6Q8TEU7 1601 aa17.63■□□□□ 0.41
PDE4C-214ENST00000599188 PPP1R15AO75807 674 aaPredicted RBP17.62■□□□□ 0.41
PDE4C-214ENST00000599188 GCC2Q8IWJ2 1684 aa17.62■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms