RNA–Protein interactions for RNA: ENST00000599078.1

LINC00664-203, long intergenic non-protein coding RNA 664, humanhuman

TSL 1 (best) BASIC

Gene LINC00664, Length 3,760 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00664-203ENST00000599078 NCAPD3P42695 1498 aa18.14■□□□□ 0.49
LINC00664-203ENST00000599078 IGF1RP08069 1367 aa18.12■□□□□ 0.49
LINC00664-203ENST00000599078 ARAP1Q96P48 1450 aa18.11■□□□□ 0.49
LINC00664-203ENST00000599078 FHOD3Q2V2M9 1422 aa18.1■□□□□ 0.49
LINC00664-203ENST00000599078 FKBP8Q14318 412 aa18.1■□□□□ 0.49
LINC00664-203ENST00000599078 FHAD1B1AJZ9 1412 aa18.07■□□□□ 0.48
LINC00664-203ENST00000599078 SETD5Q9C0A6 1442 aa18.05■□□□□ 0.48
LINC00664-203ENST00000599078 CUX1P39880 1505 aa18.05■□□□□ 0.48
LINC00664-203ENST00000599078 PRXQ9BXM0 1461 aa18.05■□□□□ 0.48
LINC00664-203ENST00000599078 TOP2BQ02880 1626 aa18.04■□□□□ 0.48
LINC00664-203ENST00000599078 FGD5Q6ZNL6 1462 aa18.03■□□□□ 0.48
LINC00664-203ENST00000599078 KCNH8Q96L42 1107 aa18.02■□□□□ 0.48
LINC00664-203ENST00000599078 CFTRP13569 1480 aa18.01■□□□□ 0.47
LINC00664-203ENST00000599078 RAD54L2Q9Y4B4 1467 aa18.01■□□□□ 0.47
LINC00664-203ENST00000599078 HNRNPUQ00839 825 aaKnown RBP eCLIP18.01■□□□□ 0.47
LINC00664-203ENST00000599078 ERICH6Q7L0X2 663 aa18.01■□□□□ 0.47
LINC00664-203ENST00000599078 FANCD2Q9BXW9 1451 aa18■□□□□ 0.47
LINC00664-203ENST00000599078 PEG3Q9GZU2 1588 aa17.99■□□□□ 0.47
LINC00664-203ENST00000599078 ARHGAP35Q9NRY4 1499 aa17.99■□□□□ 0.47
LINC00664-203ENST00000599078 MYT1LQ9UL68 1186 aa17.98■□□□□ 0.47
LINC00664-203ENST00000599078 CDK11AQ9UQ88 783 aaPredicted RBP17.98■□□□□ 0.47
LINC00664-203ENST00000599078 FAM9BQ8IZU0 186 aa17.94■□□□□ 0.46
LINC00664-203ENST00000599078 PHLDB1Q86UU1 1377 aa17.94■□□□□ 0.46
LINC00664-203ENST00000599078 IRX6P78412 446 aaPredicted RBP17.93■□□□□ 0.46
LINC00664-203ENST00000599078 CHMP7Q8WUX9 453 aaPredicted RBP17.93■□□□□ 0.46
LINC00664-203ENST00000599078 FOXD1Q16676 465 aa17.93■□□□□ 0.46
LINC00664-203ENST00000599078 ERICH3Q5RHP9 1530 aa17.92■□□□□ 0.46
LINC00664-203ENST00000599078 SUPT16HQ9Y5B9 1047 aaKnown RBP17.92■□□□□ 0.46
LINC00664-203ENST00000599078 SLC4A1APQ9BWU0 796 aaKnown RBP17.91■□□□□ 0.46
LINC00664-203ENST00000599078 SENP3-EIF4A1A0A087X0R7 540 aa17.9■□□□□ 0.46
LINC00664-203ENST00000599078 NESP48681 1621 aa17.89■□□□□ 0.45
LINC00664-203ENST00000599078 HMGXB3Q12766 1538 aa17.87■□□□□ 0.45
LINC00664-203ENST00000599078 PPP1R15AO75807 674 aaPredicted RBP17.87■□□□□ 0.45
LINC00664-203ENST00000599078 EIF4G2P78344 907 aaKnown RBP eCLIP17.86■□□□□ 0.45
LINC00664-203ENST00000599078 DNAJC5BQ9UF47 199 aa17.86■□□□□ 0.45
LINC00664-203ENST00000599078 FMN1Q68DA7 1419 aa17.84■□□□□ 0.45
LINC00664-203ENST00000599078 RRBP1Q9P2E9 1410 aaKnown RBP17.84■□□□□ 0.45
LINC00664-203ENST00000599078 KDM2AQ9Y2K7 1162 aa17.84■□□□□ 0.45
LINC00664-203ENST00000599078 MYT1Q01538 1121 aa17.83■□□□□ 0.44
LINC00664-203ENST00000599078 LRRC9Q6ZRR7 1453 aa17.81■□□□□ 0.44
LINC00664-203ENST00000599078 MRS2Q9HD23 443 aa17.81■□□□□ 0.44
LINC00664-203ENST00000599078 CFDP1Q9UEE9 299 aaPredicted RBP17.81■□□□□ 0.44
LINC00664-203ENST00000599078 PDS5BQ9NTI5 1447 aa17.81■□□□□ 0.44
LINC00664-203ENST00000599078 GRWD1Q9BQ67 446 aaKnown RBP eCLIP17.77■□□□□ 0.44
LINC00664-203ENST00000599078 TIMELESSQ9UNS1 1208 aa17.77■□□□□ 0.44
LINC00664-203ENST00000599078 HSPA5P11021 654 aaKnown RBP17.75■□□□□ 0.43
LINC00664-203ENST00000599078 SALL2Q9Y467 1007 aaPredicted RBP17.75■□□□□ 0.43
LINC00664-203ENST00000599078 CC2D2AQ9P2K1 1620 aa17.73■□□□□ 0.43
LINC00664-203ENST00000599078 TSPY4P0CV99 314 aa17.73■□□□□ 0.43
LINC00664-203ENST00000599078 TSPY10P0CW01 314 aa17.73■□□□□ 0.43
LINC00664-203ENST00000599078 MPHOSPH9Q99550 1183 aa17.71■□□□□ 0.43
LINC00664-203ENST00000599078 BIVM-ERCC5R4GMW8 1640 aa17.71■□□□□ 0.43
LINC00664-203ENST00000599078 POLA1P09884 1462 aaPredicted RBP17.71■□□□□ 0.43
LINC00664-203ENST00000599078 PLEKHD1A6NEE1 506 aa17.71■□□□□ 0.43
LINC00664-203ENST00000599078 GAPVD1Q14C86 1478 aa17.7■□□□□ 0.42
LINC00664-203ENST00000599078 L3MBTL2Q969R5 705 aa17.68■□□□□ 0.42
LINC00664-203ENST00000599078 TOPBP1Q92547 1522 aa17.68■□□□□ 0.42
LINC00664-203ENST00000599078 FGD6Q6ZV73 1430 aa17.68■□□□□ 0.42
LINC00664-203ENST00000599078 RGL3Q3MIN7 710 aa17.67■□□□□ 0.42
LINC00664-203ENST00000599078 TIAM1Q13009 1591 aa17.67■□□□□ 0.42
LINC00664-203ENST00000599078 CCDC18Q5T9S5 1454 aa17.66■□□□□ 0.42
LINC00664-203ENST00000599078 AQRO60306 1485 aaKnown RBP eCLIP17.65■□□□□ 0.42
LINC00664-203ENST00000599078 ERCC6Q03468 1493 aa17.63■□□□□ 0.41
LINC00664-203ENST00000599078 CASKIN1Q8WXD9 1431 aa17.63■□□□□ 0.41
LINC00664-203ENST00000599078 ZNF644Q9H582 1327 aaPredicted RBP17.63■□□□□ 0.41
LINC00664-203ENST00000599078 CCER2I3L3R5 266 aa17.62■□□□□ 0.41
LINC00664-203ENST00000599078 TMC1Q8TDI8 760 aa17.62■□□□□ 0.41
LINC00664-203ENST00000599078 PKD2Q13563 968 aa17.58■□□□□ 0.4
LINC00664-203ENST00000599078 NCOA2Q15596 1464 aa17.57■□□□□ 0.4
LINC00664-203ENST00000599078 MYOM3Q5VTT5 1437 aa17.56■□□□□ 0.4
LINC00664-203ENST00000599078 CARD11Q9BXL7 1154 aa17.56■□□□□ 0.4
LINC00664-203ENST00000599078 WDR97A6NE52 1622 aa17.56■□□□□ 0.4
LINC00664-203ENST00000599078 PCF11O94913 1555 aaKnown RBP17.56■□□□□ 0.4
LINC00664-203ENST00000599078 TSHZ2Q9NRE2 1034 aa17.55■□□□□ 0.4
LINC00664-203ENST00000599078 FYCO1Q9BQS8 1478 aa17.55■□□□□ 0.4
LINC00664-203ENST00000599078 DNMBPQ6XZF7 1577 aa17.52■□□□□ 0.4
LINC00664-203ENST00000599078 ABCA10Q8WWZ4 1543 aa17.52■□□□□ 0.4
LINC00664-203ENST00000599078 UACAQ9BZF9 1416 aa17.51■□□□□ 0.39
LINC00664-203ENST00000599078 DCAF11Q8TEB1 546 aa17.51■□□□□ 0.39
LINC00664-203ENST00000599078 JPH4Q96JJ6 628 aa17.5■□□□□ 0.39
LINC00664-203ENST00000599078 B4GALNT3Q6L9W6 998 aa17.48■□□□□ 0.39
LINC00664-203ENST00000599078 HNRNPMP52272 730 aaKnown RBP eCLIP17.47■□□□□ 0.39
LINC00664-203ENST00000599078 CCDC136Q96JN2 1154 aa17.45■□□□□ 0.38
LINC00664-203ENST00000599078 NUP155O75694 1391 aa17.45■□□□□ 0.38
LINC00664-203ENST00000599078 EFCAB5A4FU69 1503 aa17.44■□□□□ 0.38
LINC00664-203ENST00000599078 CHGAP10645 457 aaKnown RBP17.44■□□□□ 0.38
LINC00664-203ENST00000599078 URB2Q14146 1524 aaKnown RBP17.44■□□□□ 0.38
LINC00664-203ENST00000599078 WASHC2AQ641Q2 1341 aa17.43■□□□□ 0.38
LINC00664-203ENST00000599078 MAPKBP1O60336 1514 aa17.42■□□□□ 0.38
LINC00664-203ENST00000599078 NAIPQ13075 1403 aa17.41■□□□□ 0.38
LINC00664-203ENST00000599078 SENP3Q9H4L4 574 aaPredicted RBP17.41■□□□□ 0.38
LINC00664-203ENST00000599078 HFM1A2PYH4 1435 aa17.41■□□□□ 0.38
LINC00664-203ENST00000599078 NPM2Q86SE8 214 aaKnown RBP17.41■□□□□ 0.38
LINC00664-203ENST00000599078 RBM19Q9Y4C8 960 aaKnown RBP17.4■□□□□ 0.38
LINC00664-203ENST00000599078 PTPRKQ15262 1439 aa17.39■□□□□ 0.37
LINC00664-203ENST00000599078 PRKRIP1Q9H875 184 aaPredicted RBP17.39■□□□□ 0.37
LINC00664-203ENST00000599078 MAP3K1Q13233 1512 aa17.39■□□□□ 0.37
LINC00664-203ENST00000599078 CARMIL2Q6F5E8 1435 aa17.39■□□□□ 0.37
LINC00664-203ENST00000599078 CDK13Q14004 1512 aaKnown RBP17.37■□□□□ 0.37
LINC00664-203ENST00000599078 NBPF8Q3BBV2 869 aa17.37■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms