RNA–Protein interactions for RNA: ENST00000596288.5

MCM3-205, Transcript of minichromosome maintenance complex component 3, humanhuman

TSL 1 (best) BASIC

Gene MCM3, Length 3,169 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCM3-205ENST00000596288 CFAP43Q8NDM7 1665 aa13.12□□□□□ -0.31
MCM3-205ENST00000596288 DNMBPQ6XZF7 1577 aa13.11□□□□□ -0.31
MCM3-205ENST00000596288 LRRC9Q6ZRR7 1453 aa13.1□□□□□ -0.31
MCM3-205ENST00000596288 ABCA10Q8WWZ4 1543 aa13.09□□□□□ -0.31
MCM3-205ENST00000596288 PCF11O94913 1555 aaKnown RBP13.09□□□□□ -0.31
MCM3-205ENST00000596288 MAPKBP1O60336 1514 aa13.09□□□□□ -0.31
MCM3-205ENST00000596288 POLA1P09884 1462 aaPredicted RBP13.07□□□□□ -0.32
MCM3-205ENST00000596288 TOPBP1Q92547 1522 aa13.07□□□□□ -0.32
MCM3-205ENST00000596288 RAD54L2Q9Y4B4 1467 aa13.06□□□□□ -0.32
MCM3-205ENST00000596288 PHLDB1Q86UU1 1377 aa13.06□□□□□ -0.32
MCM3-205ENST00000596288 WDR97A6NE52 1622 aa13.06□□□□□ -0.32
MCM3-205ENST00000596288 BCL11AQ9H165 835 aa13.06□□□□□ -0.32
MCM3-205ENST00000596288 RAB3GAP2Q9H2M9 1393 aa13.04□□□□□ -0.32
MCM3-205ENST00000596288 NESP48681 1621 aa13.04□□□□□ -0.32
MCM3-205ENST00000596288 ATP1B4Q9UN42 357 aaPredicted RBP13.03□□□□□ -0.32
MCM3-205ENST00000596288 CUL7Q14999 1698 aa13.03□□□□□ -0.32
MCM3-205ENST00000596288 FHAD1B1AJZ9 1412 aa13.03□□□□□ -0.32
MCM3-205ENST00000596288 CTTNBP2Q8WZ74 1663 aa13.02□□□□□ -0.32
MCM3-205ENST00000596288 HIRIP3Q9BW71 556 aaPredicted RBP13.02□□□□□ -0.32
MCM3-205ENST00000596288 EFCAB5A4FU69 1503 aa13.02□□□□□ -0.33
MCM3-205ENST00000596288 FYCO1Q9BQS8 1478 aa13□□□□□ -0.33
MCM3-205ENST00000596288 AQRO60306 1485 aaKnown RBP eCLIP13□□□□□ -0.339e-8■■■■■ 47.8
MCM3-205ENST00000596288 FHOD3Q2V2M9 1422 aa12.99□□□□□ -0.33
MCM3-205ENST00000596288 URB2Q14146 1524 aaKnown RBP12.98□□□□□ -0.33
MCM3-205ENST00000596288 ABCA5Q8WWZ7 1642 aa12.98□□□□□ -0.33
MCM3-205ENST00000596288 CASKIN1Q8WXD9 1431 aa12.97□□□□□ -0.33
MCM3-205ENST00000596288 SETD5Q9C0A6 1442 aa12.97□□□□□ -0.33
MCM3-205ENST00000596288 SNAPC4Q5SXM2 1469 aa12.97□□□□□ -0.33
MCM3-205ENST00000596288 KCNH8Q96L42 1107 aa12.96□□□□□ -0.33
MCM3-205ENST00000596288 LAMC3Q9Y6N6 1575 aa12.96□□□□□ -0.33
MCM3-205ENST00000596288 LRRIQ1Q96JM4 1722 aa12.96□□□□□ -0.33
MCM3-205ENST00000596288 SAMD9Q5K651 1589 aa12.95□□□□□ -0.34
MCM3-205ENST00000596288 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP12.94□□□□□ -0.34
MCM3-205ENST00000596288 CNGB1Q14028 1251 aaPredicted RBP12.92□□□□□ -0.34
MCM3-205ENST00000596288 P3H3Q8IVL6 736 aa12.92□□□□□ -0.34
MCM3-205ENST00000596288 FMN1Q68DA7 1419 aa12.88□□□□□ -0.35
MCM3-205ENST00000596288 GRIN2BQ13224 1484 aa12.87□□□□□ -0.35
MCM3-205ENST00000596288 FGD6Q6ZV73 1430 aa12.87□□□□□ -0.35
MCM3-205ENST00000596288 TARBP1Q13395 1621 aaKnown RBP12.86□□□□□ -0.35
MCM3-205ENST00000596288 KIF21AQ7Z4S6 1674 aa12.86□□□□□ -0.35
MCM3-205ENST00000596288 GAPVD1Q14C86 1478 aa12.85□□□□□ -0.35
MCM3-205ENST00000596288 PTPRKQ15262 1439 aa12.85□□□□□ -0.35
MCM3-205ENST00000596288 THOC2Q8NI27 1593 aaKnown RBP12.85□□□□□ -0.35
MCM3-205ENST00000596288 FAM50AQ14320 339 aaKnown RBP12.85□□□□□ -0.35
MCM3-205ENST00000596288 TDRD9Q8NDG6 1382 aaKnown RBP12.85□□□□□ -0.35
MCM3-205ENST00000596288 SIN3AQ96ST3 1273 aa12.84□□□□□ -0.35
MCM3-205ENST00000596288 SUPT16HQ9Y5B9 1047 aaKnown RBP12.84□□□□□ -0.35
MCM3-205ENST00000596288 ARHGEF11O15085 1522 aa12.83□□□□□ -0.36
MCM3-205ENST00000596288 ANP32EQ9BTT0 268 aa12.83□□□□□ -0.36
MCM3-205ENST00000596288 DNAJC5BQ9UF47 199 aa12.82□□□□□ -0.36
MCM3-205ENST00000596288 MAGI3Q5TCQ9 1506 aa12.82□□□□□ -0.36
MCM3-205ENST00000596288 PTPN23Q9H3S7 1636 aa12.81□□□□□ -0.36
MCM3-205ENST00000596288 SENP3-EIF4A1A0A087X0R7 540 aa12.81□□□□□ -0.36
MCM3-205ENST00000596288 TSHZ2Q9NRE2 1034 aa12.81□□□□□ -0.36
MCM3-205ENST00000596288 HFM1A2PYH4 1435 aa12.81□□□□□ -0.36
MCM3-205ENST00000596288 NCOA2Q15596 1464 aa12.8□□□□□ -0.36
MCM3-205ENST00000596288 TIMELESSQ9UNS1 1208 aa12.8□□□□□ -0.36
MCM3-205ENST00000596288 PDS5BQ9NTI5 1447 aa12.79□□□□□ -0.36
MCM3-205ENST00000596288 TRIM52Q96A61 297 aa12.79□□□□□ -0.36
MCM3-205ENST00000596288 UGGT2Q9NYU1 1516 aa12.79□□□□□ -0.36
MCM3-205ENST00000596288 CCDC18Q5T9S5 1454 aa12.79□□□□□ -0.36
MCM3-205ENST00000596288 EHBP1L1Q8N3D4 1523 aa12.79□□□□□ -0.36
MCM3-205ENST00000596288 SUPT6HQ7KZ85 1726 aaKnown RBP12.78□□□□□ -0.36
MCM3-205ENST00000596288 MYOM3Q5VTT5 1437 aa12.78□□□□□ -0.36
MCM3-205ENST00000596288 PBRM1Q86U86 1689 aa12.78□□□□□ -0.36
MCM3-205ENST00000596288 KDM5BQ9UGL1 1544 aa12.78□□□□□ -0.36
MCM3-205ENST00000596288 DDX10Q13206 875 aaKnown RBP12.78□□□□□ -0.36
MCM3-205ENST00000596288 NAIPQ13075 1403 aa12.77□□□□□ -0.37
MCM3-205ENST00000596288 UACAQ9BZF9 1416 aa12.76□□□□□ -0.37
MCM3-205ENST00000596288 MTUS2Q5JR59 1369 aa12.76□□□□□ -0.37
MCM3-205ENST00000596288 PPP1R15AO75807 674 aaPredicted RBP12.76□□□□□ -0.37
MCM3-205ENST00000596288 IRX6P78412 446 aaPredicted RBP12.75□□□□□ -0.37
MCM3-205ENST00000596288 ADAMTS12P58397 1594 aa12.74□□□□□ -0.37
MCM3-205ENST00000596288 DENND4BO75064 1496 aaPredicted RBP12.74□□□□□ -0.37
MCM3-205ENST00000596288 TCOF1Q13428 1488 aaKnown RBP12.74□□□□□ -0.37
MCM3-205ENST00000596288 FKBP8Q14318 412 aa12.73□□□□□ -0.37
MCM3-205ENST00000596288 GCC2Q8IWJ2 1684 aa12.72□□□□□ -0.37
MCM3-205ENST00000596288 IQGAP2Q13576 1575 aa12.71□□□□□ -0.37
MCM3-205ENST00000596288 AEBP2Q6ZN18 517 aaPredicted RBP12.71□□□□□ -0.37
MCM3-205ENST00000596288 HECW1Q76N89 1606 aa12.71□□□□□ -0.38
MCM3-205ENST00000596288 WDR62O43379 1518 aa12.69□□□□□ -0.38
MCM3-205ENST00000596288 PLPPR3Q6T4P5 718 aa12.69□□□□□ -0.38
MCM3-205ENST00000596288 KDM6BO15054 1643 aa12.69□□□□□ -0.38
MCM3-205ENST00000596288 ARID3CA6NKF2 412 aa12.69□□□□□ -0.38
MCM3-205ENST00000596288 EPRSP07814 1512 aaKnown RBP12.68□□□□□ -0.38
MCM3-205ENST00000596288 AKNAQ7Z591 1439 aa12.67□□□□□ -0.38
MCM3-205ENST00000596288 CDK13Q14004 1512 aaKnown RBP12.66□□□□□ -0.38
MCM3-205ENST00000596288 MRC2Q9UBG0 1479 aa12.65□□□□□ -0.39
MCM3-205ENST00000596288 TONSLQ96HA7 1378 aa12.63□□□□□ -0.39
MCM3-205ENST00000596288 MIA2Q96PC5 1412 aa12.63□□□□□ -0.39
MCM3-205ENST00000596288 ERICH6Q7L0X2 663 aa12.62□□□□□ -0.39
MCM3-205ENST00000596288 DISP1Q96F81 1524 aa12.61□□□□□ -0.39
MCM3-205ENST00000596288 ZNF608Q9ULD9 1512 aaPredicted RBP12.61□□□□□ -0.39
MCM3-205ENST00000596288 KIAA0556O60303 1618 aa12.61□□□□□ -0.39
MCM3-205ENST00000596288 CCER2I3L3R5 266 aa12.6□□□□□ -0.39
MCM3-205ENST00000596288 NUP153P49790 1475 aaKnown RBP12.57□□□□□ -0.4
MCM3-205ENST00000596288 IFT140Q96RY7 1462 aa12.57□□□□□ -0.4
MCM3-205ENST00000596288 RRP7BPQ9NSQ0 103 aa12.57□□□□□ -0.4
MCM3-205ENST00000596288 DNMT1P26358 1616 aaKnown RBP12.57□□□□□ -0.4
MCM3-205ENST00000596288 KIAA0586Q9BVV6 1533 aa12.57□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 10.7 ms