RNA–Protein interactions for RNA: ENST00000596240.5

LINC00347-204, long intergenic non-protein coding RNA 347, humanhuman

TSL 3

Gene LINC00347, Length 802 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00347-204ENST00000596240 SPDYE6P0CI01 402 aa14.85□□□□□ -0.03
LINC00347-204ENST00000596240 SPDYE2Q495Y8 402 aa14.85□□□□□ -0.03
LINC00347-204ENST00000596240 ZNF692Q9BU19 519 aaPredicted RBP14.79□□□□□ -0.04
LINC00347-204ENST00000596240 SSUH2Q9Y2M2 353 aa14.78□□□□□ -0.04
LINC00347-204ENST00000596240 SPDYE4A6NLX3 237 aa14.75□□□□□ -0.05
LINC00347-204ENST00000596240 AKT1S1Q96B36 256 aa14.75□□□□□ -0.05
LINC00347-204ENST00000596240 SUPT5HO00267 1087 aaKnown RBP14.71□□□□□ -0.05
LINC00347-204ENST00000596240 TOPBP1Q92547 1522 aa14.71□□□□□ -0.06
LINC00347-204ENST00000596240 DNMBPQ6XZF7 1577 aa14.69□□□□□ -0.06
LINC00347-204ENST00000596240 REM2Q8IYK8 340 aaPredicted RBP14.69□□□□□ -0.06
LINC00347-204ENST00000596240 FKBP8Q14318 412 aa14.66□□□□□ -0.06
LINC00347-204ENST00000596240 EIF4G3O43432 1585 aaKnown RBP14.65□□□□□ -0.06
LINC00347-204ENST00000596240 ZNF608Q9ULD9 1512 aaPredicted RBP14.64□□□□□ -0.07
LINC00347-204ENST00000596240 TARBP1Q13395 1621 aaKnown RBP14.63□□□□□ -0.07
LINC00347-204ENST00000596240 IFT140Q96RY7 1462 aa14.63□□□□□ -0.07
LINC00347-204ENST00000596240 ABCC8Q09428 1581 aa14.58□□□□□ -0.08
LINC00347-204ENST00000596240 POLA1P09884 1462 aaPredicted RBP14.57□□□□□ -0.08
LINC00347-204ENST00000596240 PITPNM1O00562 1244 aa14.55□□□□□ -0.08
LINC00347-204ENST00000596240 WDR97A6NE52 1622 aa14.54□□□□□ -0.08
LINC00347-204ENST00000596240 CHD1O14646 1710 aa14.54□□□□□ -0.08
LINC00347-204ENST00000596240 CUX1P39880 1505 aa14.53□□□□□ -0.08
LINC00347-204ENST00000596240 PROM2Q8N271 834 aa14.5□□□□□ -0.09
LINC00347-204ENST00000596240 FGD5Q6ZNL6 1462 aa14.49□□□□□ -0.09
LINC00347-204ENST00000596240 RAD54L2Q9Y4B4 1467 aa14.47□□□□□ -0.09
LINC00347-204ENST00000596240 CHRDL2Q6WN34 429 aa14.47□□□□□ -0.09
LINC00347-204ENST00000596240 RIMBP3CA6NJZ7 1639 aa14.46□□□□□ -0.09
LINC00347-204ENST00000596240 RIMBP3BA6NNM3 1639 aa14.46□□□□□ -0.09
LINC00347-204ENST00000596240 RIMBP3Q9UFD9 1639 aa14.46□□□□□ -0.09
LINC00347-204ENST00000596240 AQRO60306 1485 aaKnown RBP eCLIP14.45□□□□□ -0.1
LINC00347-204ENST00000596240 SPDYE1Q8NFV5 336 aaPredicted RBP14.44□□□□□ -0.1
LINC00347-204ENST00000596240 CLEC11AQ9Y240 323 aa14.44□□□□□ -0.1
LINC00347-204ENST00000596240 PBRM1Q86U86 1689 aa14.42□□□□□ -0.1
LINC00347-204ENST00000596240 ABCA5Q8WWZ7 1642 aa14.4□□□□□ -0.1
LINC00347-204ENST00000596240 ARHGEF11O15085 1522 aa14.4□□□□□ -0.1
LINC00347-204ENST00000596240 BIVM-ERCC5R4GMW8 1640 aa14.39□□□□□ -0.11
LINC00347-204ENST00000596240 SOGA1O94964 1423 aa14.38□□□□□ -0.11
LINC00347-204ENST00000596240 SNAPC4Q5SXM2 1469 aa14.37□□□□□ -0.11
LINC00347-204ENST00000596240 SYNJ1O43426 1573 aa14.35□□□□□ -0.11
LINC00347-204ENST00000596240 TDRD9Q8NDG6 1382 aaKnown RBP14.34□□□□□ -0.11
LINC00347-204ENST00000596240 TOP2BQ02880 1626 aa14.34□□□□□ -0.11
LINC00347-204ENST00000596240 TRIM41Q8WV44 630 aa14.34□□□□□ -0.11
LINC00347-204ENST00000596240 CLASP1Q7Z460 1538 aa14.34□□□□□ -0.11
LINC00347-204ENST00000596240 ABCA10Q8WWZ4 1543 aa14.33□□□□□ -0.12
LINC00347-204ENST00000596240 MAGI1Q96QZ7 1491 aaPredicted RBP14.32□□□□□ -0.12
LINC00347-204ENST00000596240 GRIN2BQ13224 1484 aa14.3□□□□□ -0.12
LINC00347-204ENST00000596240 PIP4P2Q8N4L2 257 aa14.29□□□□□ -0.12
LINC00347-204ENST00000596240 ARAP1Q96P48 1450 aa14.27□□□□□ -0.12
LINC00347-204ENST00000596240 ADAMTS12P58397 1594 aa14.26□□□□□ -0.13
LINC00347-204ENST00000596240 SYNJ2O15056 1496 aa14.26□□□□□ -0.13
LINC00347-204ENST00000596240 GAPVD1Q14C86 1478 aa14.26□□□□□ -0.13
LINC00347-204ENST00000596240 FXR2P51116 673 aaKnown RBP eCLIP14.26□□□□□ -0.13
LINC00347-204ENST00000596240 WRNQ14191 1432 aaPredicted RBP eCLIP14.24□□□□□ -0.13
LINC00347-204ENST00000596240 PRR29P0C7W0 189 aa14.24□□□□□ -0.13
LINC00347-204ENST00000596240 STAG3Q9UJ98 1225 aa14.22□□□□□ -0.13
LINC00347-204ENST00000596240 CHADLQ6NUI6 762 aa14.19□□□□□ -0.14
LINC00347-204ENST00000596240 POTEHQ6S545 545 aa14.19□□□□□ -0.14
LINC00347-204ENST00000596240 CEP170Q5SW79 1584 aa14.17□□□□□ -0.14
LINC00347-204ENST00000596240 GRIN2AQ12879 1464 aa14.17□□□□□ -0.14
LINC00347-204ENST00000596240 ERICH3Q5RHP9 1530 aa14.15□□□□□ -0.14
LINC00347-204ENST00000596240 PRKAR2AP13861 404 aaKnown RBP14.14□□□□□ -0.15
LINC00347-204ENST00000596240 SHROOM2Q13796 1616 aa14.13□□□□□ -0.15
LINC00347-204ENST00000596240 CREBZFQ9NS37 354 aa14.12□□□□□ -0.15
LINC00347-204ENST00000596240 NUP160Q12769 1436 aa14.12□□□□□ -0.15
LINC00347-204ENST00000596240 ERCC6L2Q5T890 1561 aa14.12□□□□□ -0.15
LINC00347-204ENST00000596240 CHMP7Q8WUX9 453 aaPredicted RBP14.1□□□□□ -0.15
LINC00347-204ENST00000596240 RUSC2Q8N2Y8 1516 aa14.08□□□□□ -0.16
LINC00347-204ENST00000596240 FHAD1B1AJZ9 1412 aa14.07□□□□□ -0.16
LINC00347-204ENST00000596240 CYB5RLQ6IPT4 315 aa14.07□□□□□ -0.16
LINC00347-204ENST00000596240 FBXO3Q9UK99 471 aa14.03□□□□□ -0.16
LINC00347-204ENST00000596240 CUL7Q14999 1698 aa14.02□□□□□ -0.16
LINC00347-204ENST00000596240 MNX1P50219 401 aaPredicted RBP13.97□□□□□ -0.17
LINC00347-204ENST00000596240 VASPP50552 380 aaPredicted RBP13.97□□□□□ -0.17
LINC00347-204ENST00000596240 MIER1Q8N108 512 aa13.97□□□□□ -0.17
LINC00347-204ENST00000596240 FARP1Q9Y4F1 1045 aaPredicted RBP13.95□□□□□ -0.18
LINC00347-204ENST00000596240 PLCD3Q8N3E9 789 aa13.93□□□□□ -0.18
LINC00347-204ENST00000596240 KIF27Q86VH2 1401 aa13.92□□□□□ -0.18
LINC00347-204ENST00000596240 IGF1RP08069 1367 aa13.9□□□□□ -0.18
LINC00347-204ENST00000596240 KIF13AQ9H1H9 1805 aa13.9□□□□□ -0.18
LINC00347-204ENST00000596240 PRG4Q92954 1404 aaPredicted RBP13.89□□□□□ -0.19
LINC00347-204ENST00000596240 ADCY10Q96PN6 1610 aa13.86□□□□□ -0.19
LINC00347-204ENST00000596240 KIAA0586Q9BVV6 1533 aa13.85□□□□□ -0.19
LINC00347-204ENST00000596240 EVX2Q03828 476 aa13.83□□□□□ -0.2
LINC00347-204ENST00000596240 IQGAP2Q13576 1575 aa13.83□□□□□ -0.2
LINC00347-204ENST00000596240 HAX1O00165 279 aa13.82□□□□□ -0.2
LINC00347-204ENST00000596240 IFNLR1Q8IU57 520 aaPredicted RBP13.81□□□□□ -0.2
LINC00347-204ENST00000596240 C19orf67A6NJJ6 358 aa13.79□□□□□ -0.2
LINC00347-204ENST00000596240 PLEKHG5O94827 1062 aa13.79□□□□□ -0.2
LINC00347-204ENST00000596240 JPH4Q96JJ6 628 aa13.79□□□□□ -0.2
LINC00347-204ENST00000596240 CARMIL1Q5VZK9 1371 aa13.79□□□□□ -0.2
LINC00347-204ENST00000596240 MAPKBP1O60336 1514 aa13.79□□□□□ -0.2
LINC00347-204ENST00000596240 CTTNBP2Q8WZ74 1663 aa13.79□□□□□ -0.2
LINC00347-204ENST00000596240 DIP2BQ9P265 1576 aa13.77□□□□□ -0.21
LINC00347-204ENST00000596240 NPM1P06748 294 aaKnown RBP eCLIP13.74□□□□□ -0.21
LINC00347-204ENST00000596240 DISP1Q96F81 1524 aa13.74□□□□□ -0.21
LINC00347-204ENST00000596240 KIAA0556O60303 1618 aa13.73□□□□□ -0.21
LINC00347-204ENST00000596240 CD44P16070 742 aaKnown RBP13.73□□□□□ -0.21
LINC00347-204ENST00000596240 UGGT2Q9NYU1 1516 aa13.73□□□□□ -0.21
LINC00347-204ENST00000596240 RAPGEF2Q9Y4G8 1499 aa13.73□□□□□ -0.21
LINC00347-204ENST00000596240 KLHL34Q8N239 644 aa13.72□□□□□ -0.21
LINC00347-204ENST00000596240 RASEFQ8IZ41 740 aa13.71□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms