RNA–Protein interactions for RNA: ENST00000596240.5

LINC00347-204, long intergenic non-protein coding RNA 347, humanhuman

TSL 3

Gene LINC00347, Length 802 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00347-204ENST00000596240 AEBP2Q6ZN18 517 aaPredicted RBP26.75■■□□□ 1.87
LINC00347-204ENST00000596240 CHIC1Q5VXU3 224 aa25.86■■□□□ 1.73
LINC00347-204ENST00000596240 PHF23Q9BUL5 403 aaPredicted RBP22.82■■□□□ 1.24
LINC00347-204ENST00000596240 SENP3Q9H4L4 574 aaPredicted RBP22.55■■□□□ 1.2
LINC00347-204ENST00000596240 FOXD1Q16676 465 aa21.06■□□□□ 0.96
LINC00347-204ENST00000596240 PLPPR3Q6T4P5 718 aa20.86■□□□□ 0.93
LINC00347-204ENST00000596240 PPP6R1Q9UPN7 881 aa20.2■□□□□ 0.82
LINC00347-204ENST00000596240 ADRA2BP18089 450 aa20.16■□□□□ 0.82
LINC00347-204ENST00000596240 NISCHQ9Y2I1 1504 aa20.03■□□□□ 0.8
LINC00347-204ENST00000596240 PIAS4Q8N2W9 510 aaPredicted RBP19.78■□□□□ 0.76
LINC00347-204ENST00000596240 MSH5O43196 834 aa19.34■□□□□ 0.69
LINC00347-204ENST00000596240 PPP4R3CPQ6ZMV5 832 aa18.43■□□□□ 0.54
LINC00347-204ENST00000596240 MAPK8IP2Q13387 824 aaPredicted RBP18.36■□□□□ 0.53
LINC00347-204ENST00000596240 SCAF1Q9H7N4 1312 aaKnown RBP18.23■□□□□ 0.51
LINC00347-204ENST00000596240 CCDC180Q9P1Z9 1646 aa18.04■□□□□ 0.48
LINC00347-204ENST00000596240 DMRT2Q9Y5R5 561 aa18.02■□□□□ 0.48
LINC00347-204ENST00000596240 POTEDQ86YR6 584 aa18■□□□□ 0.47
LINC00347-204ENST00000596240 KCNA4P22459 653 aa17.9■□□□□ 0.46
LINC00347-204ENST00000596240 CNKSR2Q8WXI2 1034 aa17.88■□□□□ 0.45
LINC00347-204ENST00000596240 NCBP3Q53F19 620 aaKnown RBP17.78■□□□□ 0.44
LINC00347-204ENST00000596240 ABCC9O60706 1549 aa17.76■□□□□ 0.43
LINC00347-204ENST00000596240 NPM3O75607 178 aaKnown RBP17.67■□□□□ 0.42
LINC00347-204ENST00000596240 HOXD11P31277 338 aaPredicted RBP17.58■□□□□ 0.4
LINC00347-204ENST00000596240 RNF216Q9NWF9 866 aaPredicted RBP17.58■□□□□ 0.4
LINC00347-204ENST00000596240 DCAF8L1A6NGE4 600 aa17.26■□□□□ 0.35
LINC00347-204ENST00000596240 DNAJC5BQ9UF47 199 aa17.06■□□□□ 0.32
LINC00347-204ENST00000596240 RB1CC1Q8TDY2 1594 aa17■□□□□ 0.31
LINC00347-204ENST00000596240 SLC4A1APQ9BWU0 796 aaKnown RBP16.94■□□□□ 0.3
LINC00347-204ENST00000596240 NACADO15069 1562 aa16.91■□□□□ 0.3
LINC00347-204ENST00000596240 UNC13AQ9UPW8 1703 aa16.81■□□□□ 0.28
LINC00347-204ENST00000596240 SLC4A2P04920 1241 aa16.76■□□□□ 0.27
LINC00347-204ENST00000596240 MYO15BQ96JP2 1530 aa16.74■□□□□ 0.27
LINC00347-204ENST00000596240 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16.73■□□□□ 0.27
LINC00347-204ENST00000596240 ZCCHC6Q5VYS8 1495 aaKnown RBP16.69■□□□□ 0.26
LINC00347-204ENST00000596240 RNF39Q9H2S5 420 aa16.64■□□□□ 0.25
LINC00347-204ENST00000596240 BICRAQ9NZM4 1560 aa16.6■□□□□ 0.25
LINC00347-204ENST00000596240 DCAF1Q9Y4B6 1507 aa16.59■□□□□ 0.25
LINC00347-204ENST00000596240 DCAF8L2P0C7V8 631 aa16.54■□□□□ 0.24
LINC00347-204ENST00000596240 ZBTB22O15209 634 aa16.53■□□□□ 0.24
LINC00347-204ENST00000596240 U3KPZ7 1027 aaPredicted RBP16.53■□□□□ 0.24
LINC00347-204ENST00000596240 PABPN1Q86U42 306 aaKnown RBP eCLIP16.44■□□□□ 0.22
LINC00347-204ENST00000596240 FOXD4L1Q9NU39 408 aa16.43■□□□□ 0.22
LINC00347-204ENST00000596240 SCRIBQ14160 1630 aa16.39■□□□□ 0.21
LINC00347-204ENST00000596240 EHMT2Q96KQ7 1210 aa16.37■□□□□ 0.21
LINC00347-204ENST00000596240 C1QBPQ07021 282 aaKnown RBP16.35■□□□□ 0.21
LINC00347-204ENST00000596240 SHROOM4Q9ULL8 1493 aa16.33■□□□□ 0.2
LINC00347-204ENST00000596240 CACNB1Q02641 598 aaPredicted RBP16.3■□□□□ 0.2
LINC00347-204ENST00000596240 MYCNP04198 464 aaPredicted RBP16.25■□□□□ 0.19
LINC00347-204ENST00000596240 CSRNP3Q8WYN3 585 aa16.24■□□□□ 0.19
LINC00347-204ENST00000596240 SPINK5Q9NQ38 1064 aaPredicted RBP16.14■□□□□ 0.17
LINC00347-204ENST00000596240 EIF4G1Q04637 1599 aaKnown RBP16.13■□□□□ 0.17
LINC00347-204ENST00000596240 CC2D2AQ9P2K1 1620 aa16.12■□□□□ 0.17
LINC00347-204ENST00000596240 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.07■□□□□ 0.16
LINC00347-204ENST00000596240 HNRNPUL2Q1KMD3 747 aaKnown RBP16.07■□□□□ 0.16
LINC00347-204ENST00000596240 SAMD1Q6SPF0 538 aaPredicted RBP16.06■□□□□ 0.16
LINC00347-204ENST00000596240 CAPN15O75808 1086 aa16■□□□□ 0.15
LINC00347-204ENST00000596240 ATF5Q9Y2D1 282 aaPredicted RBP15.99■□□□□ 0.15
LINC00347-204ENST00000596240 CECR2Q9BXF3 1484 aa15.97■□□□□ 0.15
LINC00347-204ENST00000596240 TRHP20396 242 aaPredicted RBP15.91■□□□□ 0.14
LINC00347-204ENST00000596240 APLP2Q06481 763 aa15.89■□□□□ 0.13
LINC00347-204ENST00000596240 ZNF219Q9P2Y4 722 aaPredicted RBP15.81■□□□□ 0.12
LINC00347-204ENST00000596240 ATXN8OSP0DMR3 200 aa15.79■□□□□ 0.12
LINC00347-204ENST00000596240 DSG3P32926 999 aa15.79■□□□□ 0.12
LINC00347-204ENST00000596240 ABCB7O75027 752 aa15.77■□□□□ 0.12
LINC00347-204ENST00000596240 SMARCA4P51532 1647 aa15.66■□□□□ 0.1
LINC00347-204ENST00000596240 POLA2Q14181 598 aa15.6■□□□□ 0.09
LINC00347-204ENST00000596240 NCAPD3P42695 1498 aa15.57■□□□□ 0.08
LINC00347-204ENST00000596240 ATAD2BQ9ULI0 1458 aa15.57■□□□□ 0.08
LINC00347-204ENST00000596240 HMGXB3Q12766 1538 aa15.57■□□□□ 0.08
LINC00347-204ENST00000596240 BAZ1AQ9NRL2 1556 aaPredicted RBP15.54■□□□□ 0.08
LINC00347-204ENST00000596240 SMARCA2P51531 1590 aa15.53■□□□□ 0.08
LINC00347-204ENST00000596240 PEG3Q9GZU2 1588 aa15.53■□□□□ 0.08
LINC00347-204ENST00000596240 MROH2BQ7Z745 1585 aa15.45■□□□□ 0.06
LINC00347-204ENST00000596240 BAZ1BQ9UIG0 1483 aaKnown RBP15.4■□□□□ 0.06
LINC00347-204ENST00000596240 NESP48681 1621 aa15.34■□□□□ 0.05
LINC00347-204ENST00000596240 WIZO95785 1651 aa15.32■□□□□ 0.04
LINC00347-204ENST00000596240 THOC2Q8NI27 1593 aaKnown RBP15.28■□□□□ 0.04
LINC00347-204ENST00000596240 ERCC6Q03468 1493 aa15.27■□□□□ 0.04
LINC00347-204ENST00000596240 CUX2O14529 1486 aa15.27■□□□□ 0.03
LINC00347-204ENST00000596240 MKRN4PQ13434 485 aaPredicted RBP15.26■□□□□ 0.03
LINC00347-204ENST00000596240 KIF21AQ7Z4S6 1674 aa15.25■□□□□ 0.03
LINC00347-204ENST00000596240 LAMC3Q9Y6N6 1575 aa15.25■□□□□ 0.03
LINC00347-204ENST00000596240 ZBTB12Q9Y330 459 aaPredicted RBP15.2■□□□□ 0.02
LINC00347-204ENST00000596240 OSCARQ8IYS5 282 aa15.14■□□□□ 0.01
LINC00347-204ENST00000596240 FBLN2P98095 1184 aa15.13■□□□□ 0.01
LINC00347-204ENST00000596240 RSF1Q96T23 1441 aaPredicted RBP15.12■□□□□ 0.01
LINC00347-204ENST00000596240 TOP2AP11388 1531 aaKnown RBP15.12■□□□□ 0.01
LINC00347-204ENST00000596240 CADPSQ9ULU8 1353 aa15.05■□□□□ -0
LINC00347-204ENST00000596240 PDS5BQ9NTI5 1447 aa15.04■□□□□ -0
LINC00347-204ENST00000596240 PRDM2Q13029 1718 aa15.03■□□□□ -0
LINC00347-204ENST00000596240 WDR62O43379 1518 aa15.02■□□□□ -0
LINC00347-204ENST00000596240 MRC2Q9UBG0 1479 aa15□□□□□ -0.01
LINC00347-204ENST00000596240 CFTRP13569 1480 aa14.98□□□□□ -0.01
LINC00347-204ENST00000596240 DNAJC5Q9H3Z4 198 aa14.98□□□□□ -0.01
LINC00347-204ENST00000596240 CEP164Q9UPV0 1460 aa14.95□□□□□ -0.02
LINC00347-204ENST00000596240 FANCD2Q9BXW9 1451 aa14.94□□□□□ -0.02
LINC00347-204ENST00000596240 RBM42Q9BTD8 480 aaKnown RBP14.92□□□□□ -0.02
LINC00347-204ENST00000596240 CCDC88BA6NC98 1476 aa14.87□□□□□ -0.03
LINC00347-204ENST00000596240 URB2Q14146 1524 aaKnown RBP14.87□□□□□ -0.03
LINC00347-204ENST00000596240 SPDYE2BA6NHP3 402 aa14.85□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 58.2 ms