RNA–Protein interactions for RNA: ENST00000595541.1

SIN3B-206, Transcript of SIN3 transcription regulator family member B, humanhuman

TSL 2 BASIC

Gene SIN3B, Length 2,767 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIN3B-206ENST00000595541 TIAM1Q13009 1591 aa23.52■■□□□ 1.36
SIN3B-206ENST00000595541 IGF1RP08069 1367 aa23.5■■□□□ 1.35
SIN3B-206ENST00000595541 PPP1R15AO75807 674 aaPredicted RBP23.5■■□□□ 1.35
SIN3B-206ENST00000595541 NCAPD3P42695 1498 aa23.49■■□□□ 1.35
SIN3B-206ENST00000595541 CFTRP13569 1480 aa23.48■■□□□ 1.35
SIN3B-206ENST00000595541 FAM50AQ14320 339 aaKnown RBP23.47■■□□□ 1.35
SIN3B-206ENST00000595541 LRRC9Q6ZRR7 1453 aa23.46■■□□□ 1.35
SIN3B-206ENST00000595541 HMGXB3Q12766 1538 aa23.44■■□□□ 1.34
SIN3B-206ENST00000595541 MAP3K1Q13233 1512 aa23.42■■□□□ 1.34
SIN3B-206ENST00000595541 TRIM52Q96A61 297 aa23.41■■□□□ 1.34
SIN3B-206ENST00000595541 P3H3Q8IVL6 736 aa23.4■■□□□ 1.34
SIN3B-206ENST00000595541 CARMIL1Q5VZK9 1371 aa23.37■■□□□ 1.33
SIN3B-206ENST00000595541 ATP1B4Q9UN42 357 aaPredicted RBP23.34■■□□□ 1.33
SIN3B-206ENST00000595541 RBM19Q9Y4C8 960 aaKnown RBP23.3■■□□□ 1.32
SIN3B-206ENST00000595541 PCF11O94913 1555 aaKnown RBP23.29■■□□□ 1.32
SIN3B-206ENST00000595541 CCER2I3L3R5 266 aa23.28■■□□□ 1.32
SIN3B-206ENST00000595541 TIMELESSQ9UNS1 1208 aa23.27■■□□□ 1.32
SIN3B-206ENST00000595541 ANP32CO43423 234 aa23.26■■□□□ 1.31
SIN3B-206ENST00000595541 FGD5Q6ZNL6 1462 aa23.25■■□□□ 1.31
SIN3B-206ENST00000595541 CFAP43Q8NDM7 1665 aa23.24■■□□□ 1.31
SIN3B-206ENST00000595541 FHAD1B1AJZ9 1412 aa23.23■■□□□ 1.31
SIN3B-206ENST00000595541 NEFLP07196 543 aa23.23■■□□□ 1.31
SIN3B-206ENST00000595541 FHOD3Q2V2M9 1422 aa23.22■■□□□ 1.31
SIN3B-206ENST00000595541 PRDM2Q13029 1718 aa23.14■■□□□ 1.3
SIN3B-206ENST00000595541 PTPRKQ15262 1439 aa23.14■■□□□ 1.29
SIN3B-206ENST00000595541 CADPSQ9ULU8 1353 aa23.13■■□□□ 1.29
SIN3B-206ENST00000595541 TONSLQ96HA7 1378 aa23.12■■□□□ 1.29
SIN3B-206ENST00000595541 BCL11AQ9H165 835 aa23.12■■□□□ 1.29
SIN3B-206ENST00000595541 MSH5O43196 834 aa23.11■■□□□ 1.29
SIN3B-206ENST00000595541 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP23.09■■□□□ 1.29
SIN3B-206ENST00000595541 FYCO1Q9BQS8 1478 aa23.08■■□□□ 1.29
SIN3B-206ENST00000595541 FGD6Q6ZV73 1430 aa23.08■■□□□ 1.29
SIN3B-206ENST00000595541 IRX6P78412 446 aaPredicted RBP23.08■■□□□ 1.29
SIN3B-206ENST00000595541 CCDC18Q5T9S5 1454 aa23.08■■□□□ 1.28
SIN3B-206ENST00000595541 CASKIN1Q8WXD9 1431 aa23.07■■□□□ 1.28
SIN3B-206ENST00000595541 RAD54L2Q9Y4B4 1467 aa23.05■■□□□ 1.28
SIN3B-206ENST00000595541 AQRO60306 1485 aaKnown RBP eCLIP23.04■■□□□ 1.284e-7■■■■■ 40
SIN3B-206ENST00000595541 HNRNPUQ00839 825 aaKnown RBP eCLIP23.03■■□□□ 1.28
SIN3B-206ENST00000595541 KDM5BQ9UGL1 1544 aa23.03■■□□□ 1.28
SIN3B-206ENST00000595541 UACAQ9BZF9 1416 aa23.02■■□□□ 1.28
SIN3B-206ENST00000595541 HFM1A2PYH4 1435 aa23■■□□□ 1.27
SIN3B-206ENST00000595541 PTPN23Q9H3S7 1636 aa22.99■■□□□ 1.27
SIN3B-206ENST00000595541 NAIPQ13075 1403 aa22.98■■□□□ 1.27
SIN3B-206ENST00000595541 WASHC2AQ641Q2 1341 aa22.96■■□□□ 1.27
SIN3B-206ENST00000595541 EFCAB5A4FU69 1503 aa22.96■■□□□ 1.27
SIN3B-206ENST00000595541 SNAPC4Q5SXM2 1469 aa22.96■■□□□ 1.27
SIN3B-206ENST00000595541 CCDC184Q52MB2 194 aa22.95■■□□□ 1.27
SIN3B-206ENST00000595541 MTUS2Q5JR59 1369 aa22.94■■□□□ 1.26
SIN3B-206ENST00000595541 FANCD2Q9BXW9 1451 aa22.92■■□□□ 1.26
SIN3B-206ENST00000595541 HSPA5P11021 654 aaKnown RBP22.92■■□□□ 1.26
SIN3B-206ENST00000595541 LRRIQ1Q96JM4 1722 aa22.9■■□□□ 1.26
SIN3B-206ENST00000595541 ABCA10Q8WWZ4 1543 aa22.9■■□□□ 1.26
SIN3B-206ENST00000595541 POLA1P09884 1462 aaPredicted RBP22.89■■□□□ 1.26
SIN3B-206ENST00000595541 FMN1Q68DA7 1419 aa22.89■■□□□ 1.25
SIN3B-206ENST00000595541 NCOA2Q15596 1464 aa22.88■■□□□ 1.25
SIN3B-206ENST00000595541 DENND4BO75064 1496 aaPredicted RBP22.87■■□□□ 1.25
SIN3B-206ENST00000595541 RRP7BPQ9NSQ0 103 aa22.87■■□□□ 1.25
SIN3B-206ENST00000595541 CTTNBP2Q8WZ74 1663 aa22.86■■□□□ 1.25
SIN3B-206ENST00000595541 MYOM3Q5VTT5 1437 aa22.85■■□□□ 1.25
SIN3B-206ENST00000595541 CHIC2Q9UKJ5 165 aa22.85■■□□□ 1.25
SIN3B-206ENST00000595541 FANCIQ9NVI1 1328 aa22.84■■□□□ 1.25
SIN3B-206ENST00000595541 C11orf95C9JLR9 678 aaPredicted RBP22.84■■□□□ 1.25
SIN3B-206ENST00000595541 CDK11AQ9UQ88 783 aaPredicted RBP22.84■■□□□ 1.25
SIN3B-206ENST00000595541 TOPBP1Q92547 1522 aa22.83■■□□□ 1.25
SIN3B-206ENST00000595541 DNMBPQ6XZF7 1577 aa22.82■■□□□ 1.24
SIN3B-206ENST00000595541 CC2D2AQ9P2K1 1620 aa22.8■■□□□ 1.24
SIN3B-206ENST00000595541 CUL7Q14999 1698 aa22.79■■□□□ 1.24
SIN3B-206ENST00000595541 GRIN2BQ13224 1484 aa22.78■■□□□ 1.24
SIN3B-206ENST00000595541 FOXD1Q16676 465 aa22.77■■□□□ 1.24
SIN3B-206ENST00000595541 KDM6BO15054 1643 aa22.77■■□□□ 1.23
SIN3B-206ENST00000595541 NESP48681 1621 aa22.76■■□□□ 1.23
SIN3B-206ENST00000595541 MAGI3Q5TCQ9 1506 aa22.76■■□□□ 1.23
SIN3B-206ENST00000595541 EIF4G2P78344 907 aaKnown RBP eCLIP22.75■■□□□ 1.238e-7■■■□□ 18.2
SIN3B-206ENST00000595541 FAM9BQ8IZU0 186 aa22.75■■□□□ 1.23
SIN3B-206ENST00000595541 SAMD9Q5K651 1589 aa22.74■■□□□ 1.23
SIN3B-206ENST00000595541 L3MBTL2Q969R5 705 aa22.74■■□□□ 1.23
SIN3B-206ENST00000595541 PRKRIP1Q9H875 184 aaPredicted RBP22.73■■□□□ 1.23
SIN3B-206ENST00000595541 CNTLNQ9NXG0 1405 aa22.73■■□□□ 1.23
SIN3B-206ENST00000595541 PPP4R2Q9NY27 417 aa22.73■■□□□ 1.23
SIN3B-206ENST00000595541 TDRD9Q8NDG6 1382 aaKnown RBP22.73■■□□□ 1.23
SIN3B-206ENST00000595541 B4GALNT3Q6L9W6 998 aa22.72■■□□□ 1.23
SIN3B-206ENST00000595541 SUPT6HQ7KZ85 1726 aaKnown RBP22.72■■□□□ 1.23
SIN3B-206ENST00000595541 UGGT2Q9NYU1 1516 aa22.71■■□□□ 1.23
SIN3B-206ENST00000595541 MPHOSPH9Q99550 1183 aa22.69■■□□□ 1.22
SIN3B-206ENST00000595541 ARHGEF11O15085 1522 aa22.69■■□□□ 1.22
SIN3B-206ENST00000595541 EHBP1L1Q8N3D4 1523 aa22.68■■□□□ 1.22
SIN3B-206ENST00000595541 CCDC7Q96M83 1385 aa22.67■■□□□ 1.22
SIN3B-206ENST00000595541 NBPF8Q3BBV2 869 aa22.67■■□□□ 1.22
SIN3B-206ENST00000595541 MRS2Q9HD23 443 aa22.67■■□□□ 1.22
SIN3B-206ENST00000595541 ERICH6BQ5W0A0 696 aa22.67■■□□□ 1.22
SIN3B-206ENST00000595541 NCOA1Q15788 1441 aa22.66■■□□□ 1.22
SIN3B-206ENST00000595541 HECW1Q76N89 1606 aa22.65■■□□□ 1.22
SIN3B-206ENST00000595541 ERICH6Q7L0X2 663 aa22.63■■□□□ 1.21
SIN3B-206ENST00000595541 GCC2Q8IWJ2 1684 aa22.63■■□□□ 1.21
SIN3B-206ENST00000595541 PRKCSHP14314 528 aaPredicted RBP22.62■■□□□ 1.21
SIN3B-206ENST00000595541 TCOF1Q13428 1488 aaKnown RBP22.62■■□□□ 1.21
SIN3B-206ENST00000595541 URB2Q14146 1524 aaKnown RBP22.61■■□□□ 1.21
SIN3B-206ENST00000595541 ZBED9Q6R2W3 1325 aa22.61■■□□□ 1.21
SIN3B-206ENST00000595541 ARID3CA6NKF2 412 aa22.6■■□□□ 1.21
SIN3B-206ENST00000595541 THOC2Q8NI27 1593 aaKnown RBP22.6■■□□□ 1.21
Retrieved 100 of 20,778 RNA–protein pairs in 63.4 ms