RNA–Protein interactions for RNA: ENST00000595437.5

FARP1-214, Transcript of FERM, ARH/RhoGEF and pleckstrin domain protein 1, humanhuman

TSL 1 (best) BASIC

Gene FARP1, Length 4,926 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FARP1-214ENST00000595437 TIMELESSQ9UNS1 1208 aa20.8■□□□□ 0.92
FARP1-214ENST00000595437 NCAPD3P42695 1498 aa20.78■□□□□ 0.92
FARP1-214ENST00000595437 FMN1Q68DA7 1419 aa20.77■□□□□ 0.92
FARP1-214ENST00000595437 EIF4G2P78344 907 aaKnown RBP eCLIP20.77■□□□□ 0.92
FARP1-214ENST00000595437 KANK4Q5T7N3 995 aaPredicted RBP20.77■□□□□ 0.91
FARP1-214ENST00000595437 ARHGAP35Q9NRY4 1499 aa20.75■□□□□ 0.91
FARP1-214ENST00000595437 ERCC6Q03468 1493 aa20.75■□□□□ 0.91
FARP1-214ENST00000595437 SCAF1Q9H7N4 1312 aaKnown RBP20.74■□□□□ 0.91
FARP1-214ENST00000595437 SETD5Q9C0A6 1442 aa20.73■□□□□ 0.91
FARP1-214ENST00000595437 CFDP1Q9UEE9 299 aaPredicted RBP20.72■□□□□ 0.91
FARP1-214ENST00000595437 HNRNPUQ00839 825 aaKnown RBP eCLIP20.72■□□□□ 0.916e-6■■□□□ 13.5
FARP1-214ENST00000595437 EIF4G1Q04637 1599 aaKnown RBP20.71■□□□□ 0.91
FARP1-214ENST00000595437 NPM1P06748 294 aaKnown RBP eCLIP20.71■□□□□ 0.91
FARP1-214ENST00000595437 FKBP8Q14318 412 aa20.66■□□□□ 0.9
FARP1-214ENST00000595437 FANCD2Q9BXW9 1451 aa20.65■□□□□ 0.9
FARP1-214ENST00000595437 TDRD9Q8NDG6 1382 aaKnown RBP20.65■□□□□ 0.9
FARP1-214ENST00000595437 GRWD1Q9BQ67 446 aaKnown RBP eCLIP20.62■□□□□ 0.892e-7■■□□□ 12.2
FARP1-214ENST00000595437 SIN3AQ96ST3 1273 aa20.61■□□□□ 0.89
FARP1-214ENST00000595437 KIF21BO75037 1637 aa20.61■□□□□ 0.89
FARP1-214ENST00000595437 FAM9BQ8IZU0 186 aa20.6■□□□□ 0.89
FARP1-214ENST00000595437 HIRIP3Q9BW71 556 aaPredicted RBP20.6■□□□□ 0.89
FARP1-214ENST00000595437 MRS2Q9HD23 443 aa20.58■□□□□ 0.89
FARP1-214ENST00000595437 RAB3GAP2Q9H2M9 1393 aa20.58■□□□□ 0.89
FARP1-214ENST00000595437 TMC1Q8TDI8 760 aa20.56■□□□□ 0.88
FARP1-214ENST00000595437 RTL5Q5HYW3 569 aaPredicted RBP20.55■□□□□ 0.88
FARP1-214ENST00000595437 KDM2AQ9Y2K7 1162 aa20.54■□□□□ 0.88
FARP1-214ENST00000595437 HMGXB3Q12766 1538 aa20.54■□□□□ 0.88
FARP1-214ENST00000595437 FHOD3Q2V2M9 1422 aa20.53■□□□□ 0.88
FARP1-214ENST00000595437 FGD5Q6ZNL6 1462 aa20.53■□□□□ 0.88
FARP1-214ENST00000595437 IGF1RP08069 1367 aa20.53■□□□□ 0.88
FARP1-214ENST00000595437 ERICH3Q5RHP9 1530 aa20.53■□□□□ 0.88
FARP1-214ENST00000595437 CARMIL2Q6F5E8 1435 aa20.52■□□□□ 0.88
FARP1-214ENST00000595437 SYNJ1O43426 1573 aa20.52■□□□□ 0.87
FARP1-214ENST00000595437 CFTRP13569 1480 aa20.51■□□□□ 0.87
FARP1-214ENST00000595437 CHGAP10645 457 aaKnown RBP20.47■□□□□ 0.87
FARP1-214ENST00000595437 KCNH8Q96L42 1107 aa20.47■□□□□ 0.87
FARP1-214ENST00000595437 NEFMP07197 916 aa20.46■□□□□ 0.87
FARP1-214ENST00000595437 TOP2BQ02880 1626 aa20.44■□□□□ 0.86
FARP1-214ENST00000595437 CANXP27824 592 aaKnown RBP20.44■□□□□ 0.86
FARP1-214ENST00000595437 BICRAQ9NZM4 1560 aa20.43■□□□□ 0.86
FARP1-214ENST00000595437 DHX57Q6P158 1386 aaKnown RBP20.42■□□□□ 0.86
FARP1-214ENST00000595437 CCER2I3L3R5 266 aa20.38■□□□□ 0.85
FARP1-214ENST00000595437 CCDC18Q5T9S5 1454 aa20.38■□□□□ 0.85
FARP1-214ENST00000595437 ESF1Q9H501 851 aaKnown RBP20.38■□□□□ 0.85
FARP1-214ENST00000595437 CARD11Q9BXL7 1154 aa20.37■□□□□ 0.85
FARP1-214ENST00000595437 ANP32AP39687 249 aaKnown RBP20.37■□□□□ 0.85
FARP1-214ENST00000595437 PEG3Q9GZU2 1588 aa20.36■□□□□ 0.85
FARP1-214ENST00000595437 PRXQ9BXM0 1461 aa20.36■□□□□ 0.85
FARP1-214ENST00000595437 GAPVD1Q14C86 1478 aa20.35■□□□□ 0.85
FARP1-214ENST00000595437 STAG3Q9UJ98 1225 aa20.34■□□□□ 0.85
FARP1-214ENST00000595437 WDR43Q15061 677 aaKnown RBP eCLIP20.34■□□□□ 0.85
FARP1-214ENST00000595437 CDCA8Q53HL2 280 aa20.34■□□□□ 0.85
FARP1-214ENST00000595437 PPP1R15AO75807 674 aaPredicted RBP20.34■□□□□ 0.85
FARP1-214ENST00000595437 RGL3Q3MIN7 710 aa20.32■□□□□ 0.84
FARP1-214ENST00000595437 RAD54L2Q9Y4B4 1467 aa20.31■□□□□ 0.84
FARP1-214ENST00000595437 MPHOSPH9Q99550 1183 aa20.3■□□□□ 0.84
FARP1-214ENST00000595437 CCDC136Q96JN2 1154 aa20.3■□□□□ 0.84
FARP1-214ENST00000595437 GOLGA6L2Q8N9W4 650 aaPredicted RBP20.29■□□□□ 0.84
FARP1-214ENST00000595437 ANKRD30AQ9BXX3 1397 aa20.29■□□□□ 0.84
FARP1-214ENST00000595437 CUX1P39880 1505 aa20.28■□□□□ 0.84
FARP1-214ENST00000595437 ZBTB47Q9UFB7 747 aaPredicted RBP20.27■□□□□ 0.84
FARP1-214ENST00000595437 ARAP1Q96P48 1450 aa20.25■□□□□ 0.83
FARP1-214ENST00000595437 LRRC9Q6ZRR7 1453 aa20.24■□□□□ 0.83
FARP1-214ENST00000595437 HSPA5P11021 654 aaKnown RBP20.24■□□□□ 0.83
FARP1-214ENST00000595437 SALL2Q9Y467 1007 aaPredicted RBP20.24■□□□□ 0.83
FARP1-214ENST00000595437 CASKIN1Q8WXD9 1431 aa20.22■□□□□ 0.83
FARP1-214ENST00000595437 PKD2Q13563 968 aa20.22■□□□□ 0.83
FARP1-214ENST00000595437 SLC24A1O60721 1099 aa20.21■□□□□ 0.83
FARP1-214ENST00000595437 RSPH4AQ5TD94 716 aa20.21■□□□□ 0.83
FARP1-214ENST00000595437 RRBP1Q9P2E9 1410 aaKnown RBP20.2■□□□□ 0.82
FARP1-214ENST00000595437 JPH4Q96JJ6 628 aa20.2■□□□□ 0.82
FARP1-214ENST00000595437 EFCAB5A4FU69 1503 aa20.18■□□□□ 0.82
FARP1-214ENST00000595437 DCAF11Q8TEB1 546 aa20.18■□□□□ 0.82
FARP1-214ENST00000595437 KNSTRNQ9Y448 316 aa20.17■□□□□ 0.82
FARP1-214ENST00000595437 FYCO1Q9BQS8 1478 aa20.17■□□□□ 0.82
FARP1-214ENST00000595437 FGD6Q6ZV73 1430 aa20.17■□□□□ 0.82
FARP1-214ENST00000595437 CC2D2AQ9P2K1 1620 aa20.17■□□□□ 0.82
FARP1-214ENST00000595437 KANK1Q14678 1352 aa20.16■□□□□ 0.82
FARP1-214ENST00000595437 UNC13AQ9UPW8 1703 aa20.16■□□□□ 0.82
FARP1-214ENST00000595437 NUP155O75694 1391 aa20.15■□□□□ 0.82
FARP1-214ENST00000595437 SUPT16HQ9Y5B9 1047 aaKnown RBP20.15■□□□□ 0.82
FARP1-214ENST00000595437 MYOM3Q5VTT5 1437 aa20.15■□□□□ 0.82
FARP1-214ENST00000595437 IRX6P78412 446 aaPredicted RBP20.14■□□□□ 0.82
FARP1-214ENST00000595437 PHLDB1Q86UU1 1377 aa20.14■□□□□ 0.81
FARP1-214ENST00000595437 TOPBP1Q92547 1522 aa20.13■□□□□ 0.81
FARP1-214ENST00000595437 FOXD1Q16676 465 aa20.12■□□□□ 0.81
FARP1-214ENST00000595437 EFCAB2Q5VUJ9 269 aa20.12■□□□□ 0.81
FARP1-214ENST00000595437 DNMBPQ6XZF7 1577 aa20.11■□□□□ 0.81
FARP1-214ENST00000595437 TMF1P82094 1093 aa20.11■□□□□ 0.81
FARP1-214ENST00000595437 L3MBTL2Q969R5 705 aa20.11■□□□□ 0.81
FARP1-214ENST00000595437 POLA1P09884 1462 aaPredicted RBP20.09■□□□□ 0.81
FARP1-214ENST00000595437 NPM2Q86SE8 214 aaKnown RBP20.08■□□□□ 0.81
FARP1-214ENST00000595437 GRIN2BQ13224 1484 aa20.08■□□□□ 0.8
FARP1-214ENST00000595437 PPP4R2Q9NY27 417 aa20.07■□□□□ 0.8
FARP1-214ENST00000595437 UACAQ9BZF9 1416 aa20.05■□□□□ 0.8
FARP1-214ENST00000595437 NESP48681 1621 aa20.04■□□□□ 0.8
FARP1-214ENST00000595437 CFAP53Q96M91 514 aa20.04■□□□□ 0.8
FARP1-214ENST00000595437 NCOA2Q15596 1464 aa20.03■□□□□ 0.8
FARP1-214ENST00000595437 UPF2Q9HAU5 1272 aaKnown RBP20.03■□□□□ 0.8
FARP1-214ENST00000595437 TIAM1Q13009 1591 aa20.02■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms