RNA–Protein interactions for RNA: ENST00000594465.7

PDE4C-206, Transcript of phosphodiesterase 4C, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PDE4C, Length 2,988 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE4C-206ENST00000594465 SUPT16HQ9Y5B9 1047 aaKnown RBP17.4■□□□□ 0.38
PDE4C-206ENST00000594465 PRDM2Q13029 1718 aa17.39■□□□□ 0.37
PDE4C-206ENST00000594465 ARHGAP35Q9NRY4 1499 aa17.38■□□□□ 0.37
PDE4C-206ENST00000594465 TOPBP1Q92547 1522 aa17.37■□□□□ 0.37
PDE4C-206ENST00000594465 TDRD9Q8NDG6 1382 aaKnown RBP17.37■□□□□ 0.37
PDE4C-206ENST00000594465 POLA1P09884 1462 aaPredicted RBP17.36■□□□□ 0.37
PDE4C-206ENST00000594465 ERICH6Q7L0X2 663 aa17.31■□□□□ 0.36
PDE4C-206ENST00000594465 DNMBPQ6XZF7 1577 aa17.3■□□□□ 0.36
PDE4C-206ENST00000594465 URB2Q14146 1524 aaKnown RBP17.29■□□□□ 0.36
PDE4C-206ENST00000594465 PDS5BQ9NTI5 1447 aa17.27■□□□□ 0.35
PDE4C-206ENST00000594465 ABCA10Q8WWZ4 1543 aa17.25■□□□□ 0.35
PDE4C-206ENST00000594465 LAMC3Q9Y6N6 1575 aa17.23■□□□□ 0.35
PDE4C-206ENST00000594465 FHOD3Q2V2M9 1422 aa17.22■□□□□ 0.35
PDE4C-206ENST00000594465 FAM50AQ14320 339 aaKnown RBP17.19■□□□□ 0.34
PDE4C-206ENST00000594465 CCNB3Q8WWL7 1395 aa17.16■□□□□ 0.34
PDE4C-206ENST00000594465 GAPVD1Q14C86 1478 aa17.15■□□□□ 0.34
PDE4C-206ENST00000594465 KIF21AQ7Z4S6 1674 aa17.11■□□□□ 0.33
PDE4C-206ENST00000594465 ARID3CA6NKF2 412 aa17.11■□□□□ 0.33
PDE4C-206ENST00000594465 AQRO60306 1485 aaKnown RBP eCLIP17.11■□□□□ 0.333e-6■■■■□ 24.7
PDE4C-206ENST00000594465 FHAD1B1AJZ9 1412 aa17.09■□□□□ 0.33
PDE4C-206ENST00000594465 RRBP1Q9P2E9 1410 aaKnown RBP17.09■□□□□ 0.33
PDE4C-206ENST00000594465 SLC24A1O60721 1099 aa17.09■□□□□ 0.33
PDE4C-206ENST00000594465 PHLDB1Q86UU1 1377 aa17.08■□□□□ 0.33
PDE4C-206ENST00000594465 DHX57Q6P158 1386 aaKnown RBP17.07■□□□□ 0.32
PDE4C-206ENST00000594465 LRRC9Q6ZRR7 1453 aa17.06■□□□□ 0.32
PDE4C-206ENST00000594465 TIAM1Q13009 1591 aa17.06■□□□□ 0.32
PDE4C-206ENST00000594465 PCF11O94913 1555 aaKnown RBP17.03■□□□□ 0.32
PDE4C-206ENST00000594465 CUL7Q14999 1698 aa17.01■□□□□ 0.31
PDE4C-206ENST00000594465 RBM19Q9Y4C8 960 aaKnown RBP17.01■□□□□ 0.31
PDE4C-206ENST00000594465 RAB3GAP2Q9H2M9 1393 aa16.99■□□□□ 0.31
PDE4C-206ENST00000594465 ABCA5Q8WWZ7 1642 aa16.98■□□□□ 0.31
PDE4C-206ENST00000594465 FBLN2P98095 1184 aa16.98■□□□□ 0.31
PDE4C-206ENST00000594465 MTUS2Q5JR59 1369 aa16.98■□□□□ 0.31
PDE4C-206ENST00000594465 CASKIN1Q8WXD9 1431 aa16.97■□□□□ 0.31
PDE4C-206ENST00000594465 MRC2Q9UBG0 1479 aa16.97■□□□□ 0.31
PDE4C-206ENST00000594465 WDR97A6NE52 1622 aa16.96■□□□□ 0.31
PDE4C-206ENST00000594465 ZNF608Q9ULD9 1512 aaPredicted RBP16.96■□□□□ 0.31
PDE4C-206ENST00000594465 FMN1Q68DA7 1419 aa16.96■□□□□ 0.31
PDE4C-206ENST00000594465 TARBP1Q13395 1621 aaKnown RBP16.94■□□□□ 0.3
PDE4C-206ENST00000594465 BCANQ96GW7 911 aa16.94■□□□□ 0.3
PDE4C-206ENST00000594465 EFCAB5A4FU69 1503 aa16.93■□□□□ 0.3
PDE4C-206ENST00000594465 MAP3K1Q13233 1512 aa16.93■□□□□ 0.3
PDE4C-206ENST00000594465 ERCC6Q03468 1493 aa16.93■□□□□ 0.3
PDE4C-206ENST00000594465 FYCO1Q9BQS8 1478 aa16.92■□□□□ 0.3
PDE4C-206ENST00000594465 CTTNBP2Q8WZ74 1663 aa16.92■□□□□ 0.3
PDE4C-206ENST00000594465 SIN3AQ96ST3 1273 aa16.92■□□□□ 0.3
PDE4C-206ENST00000594465 MYT1LQ9UL68 1186 aa16.9■□□□□ 0.3
PDE4C-206ENST00000594465 SETD5Q9C0A6 1442 aa16.9■□□□□ 0.3
PDE4C-206ENST00000594465 FKBP8Q14318 412 aa16.87■□□□□ 0.29
PDE4C-206ENST00000594465 GRIN2BQ13224 1484 aa16.86■□□□□ 0.29
PDE4C-206ENST00000594465 SNAPC4Q5SXM2 1469 aa16.86■□□□□ 0.29
PDE4C-206ENST00000594465 CHIC2Q9UKJ5 165 aa16.86■□□□□ 0.29
PDE4C-206ENST00000594465 CHMP7Q8WUX9 453 aaPredicted RBP16.86■□□□□ 0.29
PDE4C-206ENST00000594465 MSH5O43196 834 aa16.84■□□□□ 0.29
PDE4C-206ENST00000594465 CFAP43Q8NDM7 1665 aa16.83■□□□□ 0.28
PDE4C-206ENST00000594465 IFT140Q96RY7 1462 aa16.82■□□□□ 0.28
PDE4C-206ENST00000594465 FGD6Q6ZV73 1430 aa16.81■□□□□ 0.28
PDE4C-206ENST00000594465 RRP7BPQ9NSQ0 103 aa16.8■□□□□ 0.28
PDE4C-206ENST00000594465 SAMD9Q5K651 1589 aa16.8■□□□□ 0.28
PDE4C-206ENST00000594465 NEFLP07196 543 aa16.8■□□□□ 0.28
PDE4C-206ENST00000594465 PBRM1Q86U86 1689 aa16.79■□□□□ 0.28
PDE4C-206ENST00000594465 NCOA2Q15596 1464 aa16.78■□□□□ 0.28
PDE4C-206ENST00000594465 ADAMTS12P58397 1594 aa16.77■□□□□ 0.27
PDE4C-206ENST00000594465 ANO8Q9HCE9 1232 aaPredicted RBP16.77■□□□□ 0.27
PDE4C-206ENST00000594465 IQGAP2Q13576 1575 aa16.76■□□□□ 0.27
PDE4C-206ENST00000594465 FANCIQ9NVI1 1328 aa16.76■□□□□ 0.27
PDE4C-206ENST00000594465 PTPRKQ15262 1439 aa16.76■□□□□ 0.27
PDE4C-206ENST00000594465 HIRIP3Q9BW71 556 aaPredicted RBP16.75■□□□□ 0.27
PDE4C-206ENST00000594465 WDR62O43379 1518 aa16.75■□□□□ 0.27
PDE4C-206ENST00000594465 DEKP35659 375 aaKnown RBP16.74■□□□□ 0.27
PDE4C-206ENST00000594465 CDK13Q14004 1512 aaKnown RBP16.74■□□□□ 0.27
PDE4C-206ENST00000594465 KCNH8Q96L42 1107 aa16.74■□□□□ 0.27
PDE4C-206ENST00000594465 MAPKBP1O60336 1514 aa16.74■□□□□ 0.27
PDE4C-206ENST00000594465 MYOM3Q5VTT5 1437 aa16.72■□□□□ 0.27
PDE4C-206ENST00000594465 LRRIQ1Q96JM4 1722 aa16.72■□□□□ 0.27
PDE4C-206ENST00000594465 MAGI3Q5TCQ9 1506 aa16.72■□□□□ 0.27
PDE4C-206ENST00000594465 TRIM52Q96A61 297 aa16.71■□□□□ 0.27
PDE4C-206ENST00000594465 EPRSP07814 1512 aaKnown RBP16.69■□□□□ 0.26
PDE4C-206ENST00000594465 GRIN2AQ12879 1464 aa16.68■□□□□ 0.26
PDE4C-206ENST00000594465 JPH4Q96JJ6 628 aa16.68■□□□□ 0.26
PDE4C-206ENST00000594465 KIAA0586Q9BVV6 1533 aa16.68■□□□□ 0.26
PDE4C-206ENST00000594465 EIF4G3O43432 1585 aaKnown RBP16.67■□□□□ 0.26
PDE4C-206ENST00000594465 ZNF644Q9H582 1327 aaPredicted RBP16.67■□□□□ 0.26
PDE4C-206ENST00000594465 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP16.67■□□□□ 0.26
PDE4C-206ENST00000594465 ZNF777Q9ULD5 760 aaPredicted RBP16.65■□□□□ 0.26
PDE4C-206ENST00000594465 ERICH6BQ5W0A0 696 aa16.65■□□□□ 0.26
PDE4C-206ENST00000594465 THOC2Q8NI27 1593 aaKnown RBP16.64■□□□□ 0.25
PDE4C-206ENST00000594465 CCDC18Q5T9S5 1454 aa16.64■□□□□ 0.25
PDE4C-206ENST00000594465 EHBP1L1Q8N3D4 1523 aa16.64■□□□□ 0.25
PDE4C-206ENST00000594465 DISP1Q96F81 1524 aa16.64■□□□□ 0.25
PDE4C-206ENST00000594465 SUPT6HQ7KZ85 1726 aaKnown RBP16.63■□□□□ 0.25
PDE4C-206ENST00000594465 FOXD1Q16676 465 aa16.62■□□□□ 0.25
PDE4C-206ENST00000594465 CDK11AQ9UQ88 783 aaPredicted RBP16.62■□□□□ 0.25
PDE4C-206ENST00000594465 UGGT2Q9NYU1 1516 aa16.62■□□□□ 0.25
PDE4C-206ENST00000594465 NAIPQ13075 1403 aa16.62■□□□□ 0.25
PDE4C-206ENST00000594465 HECW1Q76N89 1606 aa16.61■□□□□ 0.25
PDE4C-206ENST00000594465 DDX10Q13206 875 aaKnown RBP16.61■□□□□ 0.25
PDE4C-206ENST00000594465 HFM1A2PYH4 1435 aa16.6■□□□□ 0.25
PDE4C-206ENST00000594465 PPP1R15AO75807 674 aaPredicted RBP16.6■□□□□ 0.25
PDE4C-206ENST00000594465 PTPN23Q9H3S7 1636 aa16.59■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms