RNA–Protein interactions for RNA: ENST00000593110.5

TUBD1-215, Transcript of tubulin delta 1, humanhuman

TSL 3

Gene TUBD1, Length 551 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBD1-215ENST00000593110 EIF4G3O43432 1585 aaKnown RBP18.47■□□□□ 0.55
TUBD1-215ENST00000593110 ARAP1Q96P48 1450 aa18.45■□□□□ 0.54
TUBD1-215ENST00000593110 POLA2Q14181 598 aa18.44■□□□□ 0.54
TUBD1-215ENST00000593110 TOPBP1Q92547 1522 aa18.42■□□□□ 0.54
TUBD1-215ENST00000593110 CHD1O14646 1710 aa18.4■□□□□ 0.54
TUBD1-215ENST00000593110 CYB5RLQ6IPT4 315 aa18.37■□□□□ 0.53
TUBD1-215ENST00000593110 TARBP1Q13395 1621 aaKnown RBP18.34■□□□□ 0.53
TUBD1-215ENST00000593110 DNMBPQ6XZF7 1577 aa18.32■□□□□ 0.52
TUBD1-215ENST00000593110 CCDC88BA6NC98 1476 aa18.3■□□□□ 0.52
TUBD1-215ENST00000593110 AQRO60306 1485 aaKnown RBP eCLIP18.28■□□□□ 0.52
TUBD1-215ENST00000593110 ABCC8Q09428 1581 aa18.28■□□□□ 0.52
TUBD1-215ENST00000593110 CLASP1Q7Z460 1538 aa18.22■□□□□ 0.51
TUBD1-215ENST00000593110 POLA1P09884 1462 aaPredicted RBP18.21■□□□□ 0.51
TUBD1-215ENST00000593110 ZBTB12Q9Y330 459 aaPredicted RBP18.2■□□□□ 0.5
TUBD1-215ENST00000593110 SNAPC4Q5SXM2 1469 aa18.12■□□□□ 0.49
TUBD1-215ENST00000593110 RAD54L2Q9Y4B4 1467 aa18.12■□□□□ 0.49
TUBD1-215ENST00000593110 WDR97A6NE52 1622 aa18.1■□□□□ 0.49
TUBD1-215ENST00000593110 FBLN2P98095 1184 aa18.1■□□□□ 0.49
TUBD1-215ENST00000593110 SYNJ1O43426 1573 aa18.08■□□□□ 0.48
TUBD1-215ENST00000593110 TDRD9Q8NDG6 1382 aaKnown RBP18.06■□□□□ 0.48
TUBD1-215ENST00000593110 MAGI1Q96QZ7 1491 aaPredicted RBP18.04■□□□□ 0.48
TUBD1-215ENST00000593110 SOGA1O94964 1423 aa18.03■□□□□ 0.48
TUBD1-215ENST00000593110 FGD5Q6ZNL6 1462 aa18.01■□□□□ 0.47
TUBD1-215ENST00000593110 SYNJ2O15056 1496 aa17.99■□□□□ 0.47
TUBD1-215ENST00000593110 GRIN2BQ13224 1484 aa17.97■□□□□ 0.47
TUBD1-215ENST00000593110 GAPVD1Q14C86 1478 aa17.97■□□□□ 0.47
TUBD1-215ENST00000593110 CUX1P39880 1505 aa17.96■□□□□ 0.47
TUBD1-215ENST00000593110 MKRN4PQ13434 485 aaPredicted RBP17.95■□□□□ 0.46
TUBD1-215ENST00000593110 CHMP7Q8WUX9 453 aaPredicted RBP17.93■□□□□ 0.46
TUBD1-215ENST00000593110 PBRM1Q86U86 1689 aa17.92■□□□□ 0.46
TUBD1-215ENST00000593110 ERCC6L2Q5T890 1561 aa17.89■□□□□ 0.45
TUBD1-215ENST00000593110 ABCA5Q8WWZ7 1642 aa17.86■□□□□ 0.45
TUBD1-215ENST00000593110 ABCA10Q8WWZ4 1543 aa17.8■□□□□ 0.44
TUBD1-215ENST00000593110 KIF13AQ9H1H9 1805 aa17.79■□□□□ 0.44
TUBD1-215ENST00000593110 CEP170Q5SW79 1584 aa17.79■□□□□ 0.44
TUBD1-215ENST00000593110 GRIN2AQ12879 1464 aa17.77■□□□□ 0.44
TUBD1-215ENST00000593110 SHROOM2Q13796 1616 aa17.77■□□□□ 0.44
TUBD1-215ENST00000593110 NUP160Q12769 1436 aa17.77■□□□□ 0.44
TUBD1-215ENST00000593110 RBM42Q9BTD8 480 aaKnown RBP17.76■□□□□ 0.43
TUBD1-215ENST00000593110 ADAMTS12P58397 1594 aa17.75■□□□□ 0.43
TUBD1-215ENST00000593110 SPDYE2BA6NHP3 402 aa17.67■□□□□ 0.42
TUBD1-215ENST00000593110 SPDYE6P0CI01 402 aa17.67■□□□□ 0.42
TUBD1-215ENST00000593110 SPDYE2Q495Y8 402 aa17.67■□□□□ 0.42
TUBD1-215ENST00000593110 FHAD1B1AJZ9 1412 aa17.6■□□□□ 0.41
TUBD1-215ENST00000593110 ZNF692Q9BU19 519 aaPredicted RBP17.59■□□□□ 0.41
TUBD1-215ENST00000593110 ABCC10Q5T3U5 1492 aa17.58■□□□□ 0.41
TUBD1-215ENST00000593110 DIP2BQ9P265 1576 aa17.57■□□□□ 0.4
TUBD1-215ENST00000593110 SPDYE4A6NLX3 237 aa17.57■□□□□ 0.4
TUBD1-215ENST00000593110 MAPKBP1O60336 1514 aa17.57■□□□□ 0.4
TUBD1-215ENST00000593110 BIVM-ERCC5R4GMW8 1640 aa17.55■□□□□ 0.4
TUBD1-215ENST00000593110 ERICH3Q5RHP9 1530 aa17.55■□□□□ 0.4
TUBD1-215ENST00000593110 WRNQ14191 1432 aaPredicted RBP eCLIP17.55■□□□□ 0.4
TUBD1-215ENST00000593110 PRG4Q92954 1404 aaPredicted RBP17.55■□□□□ 0.4
TUBD1-215ENST00000593110 RUSC2Q8N2Y8 1516 aa17.52■□□□□ 0.4
TUBD1-215ENST00000593110 TOP2BQ02880 1626 aa17.52■□□□□ 0.4
TUBD1-215ENST00000593110 KDM4FA0A1W2PPD8 638 aa17.52■□□□□ 0.4
TUBD1-215ENST00000593110 FKBP8Q14318 412 aa17.52■□□□□ 0.4
TUBD1-215ENST00000593110 ADCY10Q96PN6 1610 aa17.5■□□□□ 0.39
TUBD1-215ENST00000593110 AKT1S1Q96B36 256 aa17.49■□□□□ 0.39
TUBD1-215ENST00000593110 KDM6BO15054 1643 aa17.48■□□□□ 0.39
TUBD1-215ENST00000593110 SSUH2Q9Y2M2 353 aa17.48■□□□□ 0.39
TUBD1-215ENST00000593110 FAM69CQ0P6D2 419 aa17.46■□□□□ 0.39
TUBD1-215ENST00000593110 ILDR1Q86SU0 546 aaPredicted RBP17.44■□□□□ 0.38
TUBD1-215ENST00000593110 JPH4Q96JJ6 628 aa17.43■□□□□ 0.38
TUBD1-215ENST00000593110 TSPOAP1O95153 1857 aa17.37■□□□□ 0.37
TUBD1-215ENST00000593110 PPRC1Q5VV67 1664 aaKnown RBP17.34■□□□□ 0.37
TUBD1-215ENST00000593110 NPM1P06748 294 aaKnown RBP eCLIP17.3■□□□□ 0.36
TUBD1-215ENST00000593110 REM2Q8IYK8 340 aaPredicted RBP17.3■□□□□ 0.36
TUBD1-215ENST00000593110 KIAA0586Q9BVV6 1533 aa17.3■□□□□ 0.36
TUBD1-215ENST00000593110 ADGRL1O94910 1474 aa17.28■□□□□ 0.36
TUBD1-215ENST00000593110 GLI2P10070 1586 aa17.25■□□□□ 0.35
TUBD1-215ENST00000593110 HECW2Q9P2P5 1572 aa17.23■□□□□ 0.35
TUBD1-215ENST00000593110 ABCC2Q92887 1545 aa17.22■□□□□ 0.35
TUBD1-215ENST00000593110 COL17A1Q9UMD9 1497 aaPredicted RBP17.22■□□□□ 0.35
TUBD1-215ENST00000593110 PROM2Q8N271 834 aa17.2■□□□□ 0.34
TUBD1-215ENST00000593110 CUL7Q14999 1698 aa17.2■□□□□ 0.34
TUBD1-215ENST00000593110 ASXL2Q76L83 1435 aa17.19■□□□□ 0.34
TUBD1-215ENST00000593110 SPDYE1Q8NFV5 336 aaPredicted RBP17.18■□□□□ 0.34
TUBD1-215ENST00000593110 PLB1Q6P1J6 1458 aa17.17■□□□□ 0.34
TUBD1-215ENST00000593110 IGF1RP08069 1367 aa17.16■□□□□ 0.34
TUBD1-215ENST00000593110 PTPRGP23470 1445 aa17.16■□□□□ 0.34
TUBD1-215ENST00000593110 MAP3K4Q9Y6R4 1608 aa17.16■□□□□ 0.34
TUBD1-215ENST00000593110 UHRF1BP1LA0JNW5 1464 aa17.15■□□□□ 0.34
TUBD1-215ENST00000593110 CLEC11AQ9Y240 323 aa17.12■□□□□ 0.33
TUBD1-215ENST00000593110 TNIKQ9UKE5 1360 aa17.12■□□□□ 0.33
TUBD1-215ENST00000593110 EPRSP07814 1512 aaKnown RBP17.11■□□□□ 0.33
TUBD1-215ENST00000593110 PITPNM1O00562 1244 aa17.11■□□□□ 0.33
TUBD1-215ENST00000593110 SUPT5HO00267 1087 aaKnown RBP17.09■□□□□ 0.33
TUBD1-215ENST00000593110 KDM5BQ9UGL1 1544 aa17.09■□□□□ 0.33
TUBD1-215ENST00000593110 IQGAP2Q13576 1575 aa17.08■□□□□ 0.32
TUBD1-215ENST00000593110 KIF27Q86VH2 1401 aa17.08■□□□□ 0.32
TUBD1-215ENST00000593110 DISP1Q96F81 1524 aa17.07■□□□□ 0.32
TUBD1-215ENST00000593110 STAG3Q9UJ98 1225 aa17.07■□□□□ 0.32
TUBD1-215ENST00000593110 CARMIL2Q6F5E8 1435 aa17.06■□□□□ 0.32
TUBD1-215ENST00000593110 UACAQ9BZF9 1416 aa17.06■□□□□ 0.32
TUBD1-215ENST00000593110 TEX14Q8IWB6 1497 aa17.05■□□□□ 0.32
TUBD1-215ENST00000593110 ZCCHC11Q5TAX3 1644 aaKnown RBP17.04■□□□□ 0.32
TUBD1-215ENST00000593110 CHRDL2Q6WN34 429 aa17.01■□□□□ 0.31
TUBD1-215ENST00000593110 CARMIL1Q5VZK9 1371 aa17.01■□□□□ 0.31
TUBD1-215ENST00000593110 TTBK1Q5TCY1 1321 aaPredicted RBP16.99■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms