RNA–Protein interactions for RNA: ENST00000591025.1

ZNF488-202, Transcript of zinc finger protein 488, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene ZNF488, Length 3,372 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF488-202ENST00000591025 CUX2O14529 1486 aa17.75■□□□□ 0.43
ZNF488-202ENST00000591025 ITGAEP38570 1179 aa17.74■□□□□ 0.43
ZNF488-202ENST00000591025 URB2Q14146 1524 aaKnown RBP17.74■□□□□ 0.43
ZNF488-202ENST00000591025 IGF1RP08069 1367 aa17.73■□□□□ 0.43
ZNF488-202ENST00000591025 TOPBP1Q92547 1522 aa17.73■□□□□ 0.43
ZNF488-202ENST00000591025 TARBP1Q13395 1621 aaKnown RBP17.69■□□□□ 0.42
ZNF488-202ENST00000591025 CARMIL1Q5VZK9 1371 aa17.67■□□□□ 0.42
ZNF488-202ENST00000591025 FGD5Q6ZNL6 1462 aa17.64■□□□□ 0.41
ZNF488-202ENST00000591025 TIAM1Q13009 1591 aa17.64■□□□□ 0.41
ZNF488-202ENST00000591025 RAB3GAP2Q9H2M9 1393 aa17.63■□□□□ 0.41
ZNF488-202ENST00000591025 MAP3K1Q13233 1512 aa17.61■□□□□ 0.41
ZNF488-202ENST00000591025 ABCA5Q8WWZ7 1642 aa17.61■□□□□ 0.41
ZNF488-202ENST00000591025 ABCA10Q8WWZ4 1543 aa17.61■□□□□ 0.41
ZNF488-202ENST00000591025 LRRC9Q6ZRR7 1453 aa17.58■□□□□ 0.41
ZNF488-202ENST00000591025 POLA1P09884 1462 aaPredicted RBP17.57■□□□□ 0.4
ZNF488-202ENST00000591025 MAPKBP1O60336 1514 aa17.56■□□□□ 0.4
ZNF488-202ENST00000591025 PHLDB1Q86UU1 1377 aa17.56■□□□□ 0.4
ZNF488-202ENST00000591025 SETD5Q9C0A6 1442 aa17.56■□□□□ 0.4
ZNF488-202ENST00000591025 P3H3Q8IVL6 736 aa17.56■□□□□ 0.4
ZNF488-202ENST00000591025 IFT140Q96RY7 1462 aa17.55■□□□□ 0.4
ZNF488-202ENST00000591025 FAM50AQ14320 339 aaKnown RBP17.54■□□□□ 0.4
ZNF488-202ENST00000591025 FHAD1B1AJZ9 1412 aa17.54■□□□□ 0.4
ZNF488-202ENST00000591025 ATP1B4Q9UN42 357 aaPredicted RBP17.53■□□□□ 0.4
ZNF488-202ENST00000591025 ERCC6Q03468 1493 aa17.5■□□□□ 0.39
ZNF488-202ENST00000591025 PCF11O94913 1555 aaKnown RBP17.5■□□□□ 0.39
ZNF488-202ENST00000591025 PBRM1Q86U86 1689 aa17.48■□□□□ 0.39
ZNF488-202ENST00000591025 CFAP43Q8NDM7 1665 aa17.48■□□□□ 0.39
ZNF488-202ENST00000591025 SIN3AQ96ST3 1273 aa17.47■□□□□ 0.39
ZNF488-202ENST00000591025 FHOD3Q2V2M9 1422 aa17.47■□□□□ 0.39
ZNF488-202ENST00000591025 CUL7Q14999 1698 aa17.46■□□□□ 0.39
ZNF488-202ENST00000591025 RAD54L2Q9Y4B4 1467 aa17.46■□□□□ 0.39
ZNF488-202ENST00000591025 SUPT16HQ9Y5B9 1047 aaKnown RBP17.46■□□□□ 0.39
ZNF488-202ENST00000591025 KCNH8Q96L42 1107 aa17.42■□□□□ 0.38
ZNF488-202ENST00000591025 FYCO1Q9BQS8 1478 aa17.41■□□□□ 0.38
ZNF488-202ENST00000591025 MYT1Q01538 1121 aa17.4■□□□□ 0.38
ZNF488-202ENST00000591025 CASKIN1Q8WXD9 1431 aa17.39■□□□□ 0.38
ZNF488-202ENST00000591025 EFCAB5A4FU69 1503 aa17.39■□□□□ 0.37
ZNF488-202ENST00000591025 EIF4G3O43432 1585 aaKnown RBP17.39■□□□□ 0.37
ZNF488-202ENST00000591025 DDX10Q13206 875 aaKnown RBP17.37■□□□□ 0.37
ZNF488-202ENST00000591025 AQRO60306 1485 aaKnown RBP eCLIP17.36■□□□□ 0.37
ZNF488-202ENST00000591025 TIMELESSQ9UNS1 1208 aa17.35■□□□□ 0.37
ZNF488-202ENST00000591025 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP17.34■□□□□ 0.37
ZNF488-202ENST00000591025 ADAMTS12P58397 1594 aa17.32■□□□□ 0.36
ZNF488-202ENST00000591025 FMN1Q68DA7 1419 aa17.31■□□□□ 0.36
ZNF488-202ENST00000591025 PPP1R15AO75807 674 aaPredicted RBP17.31■□□□□ 0.36
ZNF488-202ENST00000591025 CTTNBP2Q8WZ74 1663 aa17.31■□□□□ 0.36
ZNF488-202ENST00000591025 FGD6Q6ZV73 1430 aa17.31■□□□□ 0.36
ZNF488-202ENST00000591025 HIRIP3Q9BW71 556 aaPredicted RBP17.3■□□□□ 0.36
ZNF488-202ENST00000591025 MTUS2Q5JR59 1369 aa17.28■□□□□ 0.36
ZNF488-202ENST00000591025 MAGI1Q96QZ7 1491 aaPredicted RBP17.28■□□□□ 0.36
ZNF488-202ENST00000591025 SNAPC4Q5SXM2 1469 aa17.27■□□□□ 0.36
ZNF488-202ENST00000591025 GRIN2BQ13224 1484 aa17.26■□□□□ 0.35
ZNF488-202ENST00000591025 GAPVD1Q14C86 1478 aa17.26■□□□□ 0.35
ZNF488-202ENST00000591025 CCDC18Q5T9S5 1454 aa17.25■□□□□ 0.35
ZNF488-202ENST00000591025 TDRD9Q8NDG6 1382 aaKnown RBP17.24■□□□□ 0.35
ZNF488-202ENST00000591025 TONSLQ96HA7 1378 aa17.23■□□□□ 0.35
ZNF488-202ENST00000591025 PTPRKQ15262 1439 aa17.23■□□□□ 0.35
ZNF488-202ENST00000591025 HFM1A2PYH4 1435 aa17.21■□□□□ 0.35
ZNF488-202ENST00000591025 ANP32CO43423 234 aa17.2■□□□□ 0.34
ZNF488-202ENST00000591025 UACAQ9BZF9 1416 aa17.19■□□□□ 0.34
ZNF488-202ENST00000591025 SAMD9Q5K651 1589 aa17.19■□□□□ 0.34
ZNF488-202ENST00000591025 TSHZ2Q9NRE2 1034 aa17.19■□□□□ 0.34
ZNF488-202ENST00000591025 NCOA2Q15596 1464 aa17.19■□□□□ 0.34
ZNF488-202ENST00000591025 PTPN23Q9H3S7 1636 aa17.18■□□□□ 0.34
ZNF488-202ENST00000591025 ZNF608Q9ULD9 1512 aaPredicted RBP17.18■□□□□ 0.34
ZNF488-202ENST00000591025 MYOM3Q5VTT5 1437 aa17.18■□□□□ 0.34
ZNF488-202ENST00000591025 CCER2I3L3R5 266 aa17.18■□□□□ 0.34
ZNF488-202ENST00000591025 BCANQ96GW7 911 aa17.17■□□□□ 0.34
ZNF488-202ENST00000591025 LRRIQ1Q96JM4 1722 aa17.16■□□□□ 0.34
ZNF488-202ENST00000591025 NAIPQ13075 1403 aa17.16■□□□□ 0.34
ZNF488-202ENST00000591025 FKBP8Q14318 412 aa17.16■□□□□ 0.34
ZNF488-202ENST00000591025 SUPT6HQ7KZ85 1726 aaKnown RBP17.13■□□□□ 0.33
ZNF488-202ENST00000591025 TRIM52Q96A61 297 aa17.12■□□□□ 0.33
ZNF488-202ENST00000591025 EHBP1L1Q8N3D4 1523 aa17.12■□□□□ 0.33
ZNF488-202ENST00000591025 SYNJ2O15056 1496 aa17.12■□□□□ 0.33
ZNF488-202ENST00000591025 SHROOM2Q13796 1616 aa17.09■□□□□ 0.33
ZNF488-202ENST00000591025 UGGT2Q9NYU1 1516 aa17.08■□□□□ 0.33
ZNF488-202ENST00000591025 RRP7BPQ9NSQ0 103 aa17.08■□□□□ 0.33
ZNF488-202ENST00000591025 CHD1O14646 1710 aa17.08■□□□□ 0.32
ZNF488-202ENST00000591025 NEFLP07196 543 aa17.08■□□□□ 0.32
ZNF488-202ENST00000591025 CHIC2Q9UKJ5 165 aa17.07■□□□□ 0.32
ZNF488-202ENST00000591025 MAGI3Q5TCQ9 1506 aa17.07■□□□□ 0.32
ZNF488-202ENST00000591025 NUP160Q12769 1436 aa17.07■□□□□ 0.32
ZNF488-202ENST00000591025 ARHGEF11O15085 1522 aa17.05■□□□□ 0.32
ZNF488-202ENST00000591025 KDM5BQ9UGL1 1544 aa17.05■□□□□ 0.32
ZNF488-202ENST00000591025 GRIN2AQ12879 1464 aa17.04■□□□□ 0.32
ZNF488-202ENST00000591025 CLASP1Q7Z460 1538 aa17.04■□□□□ 0.32
ZNF488-202ENST00000591025 TCOF1Q13428 1488 aaKnown RBP17.02■□□□□ 0.31
ZNF488-202ENST00000591025 CEP170Q5SW79 1584 aa17■□□□□ 0.31
ZNF488-202ENST00000591025 HECW1Q76N89 1606 aa16.99■□□□□ 0.31
ZNF488-202ENST00000591025 HSPA5P11021 654 aaKnown RBP16.98■□□□□ 0.31
ZNF488-202ENST00000591025 DENND4BO75064 1496 aaPredicted RBP16.98■□□□□ 0.31
ZNF488-202ENST00000591025 ARID3CA6NKF2 412 aa16.98■□□□□ 0.31
ZNF488-202ENST00000591025 EPRSP07814 1512 aaKnown RBP16.98■□□□□ 0.31
ZNF488-202ENST00000591025 GCC2Q8IWJ2 1684 aa16.97■□□□□ 0.31
ZNF488-202ENST00000591025 WASHC2AQ641Q2 1341 aa16.96■□□□□ 0.31
ZNF488-202ENST00000591025 KDM6BO15054 1643 aa16.95■□□□□ 0.3
ZNF488-202ENST00000591025 IQGAP2Q13576 1575 aa16.95■□□□□ 0.3
ZNF488-202ENST00000591025 CDK13Q14004 1512 aaKnown RBP16.95■□□□□ 0.3
ZNF488-202ENST00000591025 AKNAQ7Z591 1439 aa16.95■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms