RNA–Protein interactions for RNA: ENST00000590523.1

LINC00662-206, long intergenic non-protein coding RNA 662, humanhuman

TSL 1 (best) BASIC

Gene LINC00662, Length 2,053 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00662-206ENST00000590523 LAMC3Q9Y6N6 1575 aa18.53■□□□□ 0.56
LINC00662-206ENST00000590523 FANCD2Q9BXW9 1451 aa18.51■□□□□ 0.55
LINC00662-206ENST00000590523 SENP3Q9H4L4 574 aaPredicted RBP18.5■□□□□ 0.55
LINC00662-206ENST00000590523 CFAP43Q8NDM7 1665 aa18.5■□□□□ 0.55
LINC00662-206ENST00000590523 LRRC9Q6ZRR7 1453 aa18.49■□□□□ 0.55
LINC00662-206ENST00000590523 PDS5BQ9NTI5 1447 aa18.46■□□□□ 0.55
LINC00662-206ENST00000590523 DNMBPQ6XZF7 1577 aa18.45■□□□□ 0.54
LINC00662-206ENST00000590523 EFCAB5A4FU69 1503 aa18.45■□□□□ 0.54
LINC00662-206ENST00000590523 RAB3GAP2Q9H2M9 1393 aa18.44■□□□□ 0.54
LINC00662-206ENST00000590523 SETD5Q9C0A6 1442 aa18.43■□□□□ 0.54
LINC00662-206ENST00000590523 ABCA10Q8WWZ4 1543 aa18.42■□□□□ 0.54
LINC00662-206ENST00000590523 PHF23Q9BUL5 403 aaPredicted RBP18.42■□□□□ 0.54
LINC00662-206ENST00000590523 CUL7Q14999 1698 aa18.41■□□□□ 0.54
LINC00662-206ENST00000590523 AQRO60306 1485 aaKnown RBP eCLIP18.4■□□□□ 0.54
LINC00662-206ENST00000590523 MAPKBP1O60336 1514 aa18.4■□□□□ 0.54
LINC00662-206ENST00000590523 FYCO1Q9BQS8 1478 aa18.4■□□□□ 0.54
LINC00662-206ENST00000590523 PCF11O94913 1555 aaKnown RBP18.39■□□□□ 0.54
LINC00662-206ENST00000590523 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP18.39■□□□□ 0.53
LINC00662-206ENST00000590523 PHLDB1Q86UU1 1377 aa18.36■□□□□ 0.53
LINC00662-206ENST00000590523 ITGAEP38570 1179 aa18.36■□□□□ 0.53
LINC00662-206ENST00000590523 TIMELESSQ9UNS1 1208 aa18.36■□□□□ 0.53
LINC00662-206ENST00000590523 CTTNBP2Q8WZ74 1663 aa18.35■□□□□ 0.53
LINC00662-206ENST00000590523 CASKIN1Q8WXD9 1431 aa18.35■□□□□ 0.53
LINC00662-206ENST00000590523 TOPBP1Q92547 1522 aa18.34■□□□□ 0.53
LINC00662-206ENST00000590523 POLA1P09884 1462 aaPredicted RBP18.32■□□□□ 0.52
LINC00662-206ENST00000590523 KIF21AQ7Z4S6 1674 aa18.31■□□□□ 0.52
LINC00662-206ENST00000590523 FMN1Q68DA7 1419 aa18.29■□□□□ 0.52
LINC00662-206ENST00000590523 ERCC6Q03468 1493 aa18.27■□□□□ 0.52
LINC00662-206ENST00000590523 RAD54L2Q9Y4B4 1467 aa18.27■□□□□ 0.52
LINC00662-206ENST00000590523 FHOD3Q2V2M9 1422 aa18.27■□□□□ 0.52
LINC00662-206ENST00000590523 FAM50AQ14320 339 aaKnown RBP18.27■□□□□ 0.51
LINC00662-206ENST00000590523 WDR97A6NE52 1622 aa18.26■□□□□ 0.51
LINC00662-206ENST00000590523 URB2Q14146 1524 aaKnown RBP18.25■□□□□ 0.51
LINC00662-206ENST00000590523 ANP32EQ9BTT0 268 aa18.21■□□□□ 0.51
LINC00662-206ENST00000590523 SUPT16HQ9Y5B9 1047 aaKnown RBP18.21■□□□□ 0.51
LINC00662-206ENST00000590523 THOC2Q8NI27 1593 aaKnown RBP18.21■□□□□ 0.5
LINC00662-206ENST00000590523 SAMD9Q5K651 1589 aa18.2■□□□□ 0.5
LINC00662-206ENST00000590523 P3H3Q8IVL6 736 aa18.19■□□□□ 0.5
LINC00662-206ENST00000590523 FGD6Q6ZV73 1430 aa18.19■□□□□ 0.5
LINC00662-206ENST00000590523 SNAPC4Q5SXM2 1469 aa18.19■□□□□ 0.5
LINC00662-206ENST00000590523 MRC2Q9UBG0 1479 aa18.19■□□□□ 0.5
LINC00662-206ENST00000590523 ATP1B4Q9UN42 357 aaPredicted RBP18.18■□□□□ 0.5
LINC00662-206ENST00000590523 ABCA5Q8WWZ7 1642 aa18.18■□□□□ 0.5
LINC00662-206ENST00000590523 MTUS2Q5JR59 1369 aa18.13■□□□□ 0.49
LINC00662-206ENST00000590523 HFM1A2PYH4 1435 aa18.13■□□□□ 0.49
LINC00662-206ENST00000590523 SIN3AQ96ST3 1273 aa18.12■□□□□ 0.49
LINC00662-206ENST00000590523 PPP1R15AO75807 674 aaPredicted RBP18.11■□□□□ 0.49
LINC00662-206ENST00000590523 SUPT6HQ7KZ85 1726 aaKnown RBP18.11■□□□□ 0.49
LINC00662-206ENST00000590523 GAPVD1Q14C86 1478 aa18.11■□□□□ 0.49
LINC00662-206ENST00000590523 EHBP1L1Q8N3D4 1523 aa18.1■□□□□ 0.49
LINC00662-206ENST00000590523 GRIN2BQ13224 1484 aa18.1■□□□□ 0.49
LINC00662-206ENST00000590523 CCDC18Q5T9S5 1454 aa18.1■□□□□ 0.49
LINC00662-206ENST00000590523 UACAQ9BZF9 1416 aa18.1■□□□□ 0.49
LINC00662-206ENST00000590523 TSHZ2Q9NRE2 1034 aa18.1■□□□□ 0.49
LINC00662-206ENST00000590523 PTPN23Q9H3S7 1636 aa18.08■□□□□ 0.49
LINC00662-206ENST00000590523 MYOM3Q5VTT5 1437 aa18.08■□□□□ 0.49
LINC00662-206ENST00000590523 WDR62O43379 1518 aa18.07■□□□□ 0.48
LINC00662-206ENST00000590523 LRRIQ1Q96JM4 1722 aa18.07■□□□□ 0.48
LINC00662-206ENST00000590523 NCOA2Q15596 1464 aa18.06■□□□□ 0.48
LINC00662-206ENST00000590523 CCER2I3L3R5 266 aa18.05■□□□□ 0.48
LINC00662-206ENST00000590523 TONSLQ96HA7 1378 aa18.05■□□□□ 0.48
LINC00662-206ENST00000590523 DDX10Q13206 875 aaKnown RBP18.04■□□□□ 0.48
LINC00662-206ENST00000590523 BCL11AQ9H165 835 aa18.04■□□□□ 0.48
LINC00662-206ENST00000590523 TDRD9Q8NDG6 1382 aaKnown RBP18.02■□□□□ 0.48
LINC00662-206ENST00000590523 ARHGEF11O15085 1522 aa18.02■□□□□ 0.47
LINC00662-206ENST00000590523 UGGT2Q9NYU1 1516 aa18.02■□□□□ 0.47
LINC00662-206ENST00000590523 NAIPQ13075 1403 aa18.02■□□□□ 0.47
LINC00662-206ENST00000590523 PTPRKQ15262 1439 aa17.99■□□□□ 0.47
LINC00662-206ENST00000590523 ANP32CO43423 234 aa17.99■□□□□ 0.47
LINC00662-206ENST00000590523 HECW1Q76N89 1606 aa17.98■□□□□ 0.47
LINC00662-206ENST00000590523 TCOF1Q13428 1488 aaKnown RBP17.98■□□□□ 0.47
LINC00662-206ENST00000590523 TARBP1Q13395 1621 aaKnown RBP17.98■□□□□ 0.47
LINC00662-206ENST00000590523 AKNAQ7Z591 1439 aa17.98■□□□□ 0.47
LINC00662-206ENST00000590523 GCC2Q8IWJ2 1684 aa17.97■□□□□ 0.47
LINC00662-206ENST00000590523 KCNH8Q96L42 1107 aa17.96■□□□□ 0.47
LINC00662-206ENST00000590523 IFT140Q96RY7 1462 aa17.95■□□□□ 0.46
LINC00662-206ENST00000590523 PBRM1Q86U86 1689 aa17.94■□□□□ 0.46
LINC00662-206ENST00000590523 IQGAP2Q13576 1575 aa17.92■□□□□ 0.46
LINC00662-206ENST00000590523 MIA2Q96PC5 1412 aa17.91■□□□□ 0.46
LINC00662-206ENST00000590523 MAGI3Q5TCQ9 1506 aa17.89■□□□□ 0.45
LINC00662-206ENST00000590523 ZNF608Q9ULD9 1512 aaPredicted RBP17.88■□□□□ 0.45
LINC00662-206ENST00000590523 ADAMTS12P58397 1594 aa17.88■□□□□ 0.45
LINC00662-206ENST00000590523 EPRSP07814 1512 aaKnown RBP17.87■□□□□ 0.45
LINC00662-206ENST00000590523 KDM5BQ9UGL1 1544 aa17.87■□□□□ 0.45
LINC00662-206ENST00000590523 NEFLP07196 543 aa17.86■□□□□ 0.45
LINC00662-206ENST00000590523 DNAJC5Q9H3Z4 198 aa17.86■□□□□ 0.45
LINC00662-206ENST00000590523 HIRIP3Q9BW71 556 aaPredicted RBP17.82■□□□□ 0.44
LINC00662-206ENST00000590523 FKBP8Q14318 412 aa17.81■□□□□ 0.44
LINC00662-206ENST00000590523 ROCK1Q13464 1354 aa17.79■□□□□ 0.44
LINC00662-206ENST00000590523 EIF4G3O43432 1585 aaKnown RBP17.78■□□□□ 0.44
LINC00662-206ENST00000590523 RRP7BPQ9NSQ0 103 aa17.77■□□□□ 0.44
LINC00662-206ENST00000590523 DENND4BO75064 1496 aaPredicted RBP17.76■□□□□ 0.43
LINC00662-206ENST00000590523 CDK13Q14004 1512 aaKnown RBP17.75■□□□□ 0.43
LINC00662-206ENST00000590523 TRIM52Q96A61 297 aa17.75■□□□□ 0.43
LINC00662-206ENST00000590523 EIF4G2P78344 907 aaKnown RBP eCLIP17.73■□□□□ 0.43
LINC00662-206ENST00000590523 KDM6BO15054 1643 aa17.73■□□□□ 0.43
LINC00662-206ENST00000590523 DNMT1P26358 1616 aaKnown RBP17.73■□□□□ 0.43
LINC00662-206ENST00000590523 MPHOSPH9Q99550 1183 aa17.73■□□□□ 0.43
LINC00662-206ENST00000590523 CHIC2Q9UKJ5 165 aa17.73■□□□□ 0.43
LINC00662-206ENST00000590523 KIAA0586Q9BVV6 1533 aa17.72■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms