RNA–Protein interactions for RNA: ENST00000589799.5

ZNF235-204, Transcript of zinc finger protein 235, humanhuman

TSL 1 (best) BASIC

Gene ZNF235, Length 955 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF235-204ENST00000589799 RIMBP3Q9UFD9 1639 aa12.38□□□□□ -0.43
ZNF235-204ENST00000589799 FANCD2Q9BXW9 1451 aa12.37□□□□□ -0.43
ZNF235-204ENST00000589799 WIZO95785 1651 aa12.34□□□□□ -0.43
ZNF235-204ENST00000589799 ARHGEF11O15085 1522 aa12.28□□□□□ -0.44
ZNF235-204ENST00000589799 URB2Q14146 1524 aaKnown RBP12.28□□□□□ -0.44
ZNF235-204ENST00000589799 IFNLR1Q8IU57 520 aaPredicted RBP12.28□□□□□ -0.44
ZNF235-204ENST00000589799 CFTRP13569 1480 aa12.25□□□□□ -0.45
ZNF235-204ENST00000589799 PRDM2Q13029 1718 aa12.23□□□□□ -0.45
ZNF235-204ENST00000589799 ZNF692Q9BU19 519 aaPredicted RBP12.22□□□□□ -0.45
ZNF235-204ENST00000589799 DSG3P32926 999 aa12.19□□□□□ -0.46
ZNF235-204ENST00000589799 ZNF608Q9ULD9 1512 aaPredicted RBP12.19□□□□□ -0.46
ZNF235-204ENST00000589799 IFT140Q96RY7 1462 aa12.18□□□□□ -0.46
ZNF235-204ENST00000589799 CYB5RLQ6IPT4 315 aa12.17□□□□□ -0.46
ZNF235-204ENST00000589799 CHD1O14646 1710 aa12.17□□□□□ -0.46
ZNF235-204ENST00000589799 KLHL34Q8N239 644 aa12.16□□□□□ -0.46
ZNF235-204ENST00000589799 EIF4G3O43432 1585 aaKnown RBP12.16□□□□□ -0.46
ZNF235-204ENST00000589799 SPDYE2BA6NHP3 402 aa12.15□□□□□ -0.46
ZNF235-204ENST00000589799 SPDYE6P0CI01 402 aa12.15□□□□□ -0.46
ZNF235-204ENST00000589799 SPDYE2Q495Y8 402 aa12.15□□□□□ -0.46
ZNF235-204ENST00000589799 TOP2AP11388 1531 aaKnown RBP12.15□□□□□ -0.46
ZNF235-204ENST00000589799 STAG3Q9UJ98 1225 aa12.14□□□□□ -0.47
ZNF235-204ENST00000589799 ARAP1Q96P48 1450 aa12.13□□□□□ -0.47
ZNF235-204ENST00000589799 PLCB2Q00722 1185 aa12.11□□□□□ -0.47
ZNF235-204ENST00000589799 PKD2Q13563 968 aa12.09□□□□□ -0.47
ZNF235-204ENST00000589799 SPOCK2Q92563 424 aa12.09□□□□□ -0.47
ZNF235-204ENST00000589799 SSUH2Q9Y2M2 353 aa12.09□□□□□ -0.47
ZNF235-204ENST00000589799 TOPBP1Q92547 1522 aa12.09□□□□□ -0.47
ZNF235-204ENST00000589799 PLCD3Q8N3E9 789 aa12.08□□□□□ -0.48
ZNF235-204ENST00000589799 RSF1Q96T23 1441 aaPredicted RBP12.06□□□□□ -0.48
ZNF235-204ENST00000589799 DNMBPQ6XZF7 1577 aa12.04□□□□□ -0.48
ZNF235-204ENST00000589799 ABCC8Q09428 1581 aa12.03□□□□□ -0.48
ZNF235-204ENST00000589799 TARBP1Q13395 1621 aaKnown RBP12.02□□□□□ -0.49
ZNF235-204ENST00000589799 AQRO60306 1485 aaKnown RBP eCLIP12.02□□□□□ -0.49
ZNF235-204ENST00000589799 MIER1Q8N108 512 aa12□□□□□ -0.49
ZNF235-204ENST00000589799 ECM2O94769 699 aaPredicted RBP11.98□□□□□ -0.49
ZNF235-204ENST00000589799 HAP1P54257 671 aaPredicted RBP11.98□□□□□ -0.49
ZNF235-204ENST00000589799 CCDC88BA6NC98 1476 aa11.97□□□□□ -0.49
ZNF235-204ENST00000589799 PLEKHG5O94827 1062 aa11.96□□□□□ -0.49
ZNF235-204ENST00000589799 CLASP1Q7Z460 1538 aa11.96□□□□□ -0.5
ZNF235-204ENST00000589799 SYNJ1O43426 1573 aa11.94□□□□□ -0.5
ZNF235-204ENST00000589799 POLA1P09884 1462 aaPredicted RBP11.93□□□□□ -0.5
ZNF235-204ENST00000589799 SNAPC4Q5SXM2 1469 aa11.92□□□□□ -0.5
ZNF235-204ENST00000589799 ZBTB47Q9UFB7 747 aaPredicted RBP11.92□□□□□ -0.5
ZNF235-204ENST00000589799 RAD54L2Q9Y4B4 1467 aa11.89□□□□□ -0.51
ZNF235-204ENST00000589799 ZBTB4Q9P1Z0 1013 aaPredicted RBP11.89□□□□□ -0.51
ZNF235-204ENST00000589799 WDR97A6NE52 1622 aa11.89□□□□□ -0.51
ZNF235-204ENST00000589799 TDRD9Q8NDG6 1382 aaKnown RBP11.88□□□□□ -0.51
ZNF235-204ENST00000589799 CHMP7Q8WUX9 453 aaPredicted RBP11.87□□□□□ -0.51
ZNF235-204ENST00000589799 MAGI1Q96QZ7 1491 aaPredicted RBP11.87□□□□□ -0.51
ZNF235-204ENST00000589799 SOGA1O94964 1423 aa11.86□□□□□ -0.51
ZNF235-204ENST00000589799 GAPVD1Q14C86 1478 aa11.85□□□□□ -0.51
ZNF235-204ENST00000589799 BBXQ8WY36 941 aaPredicted RBP11.84□□□□□ -0.51
ZNF235-204ENST00000589799 CIZ1Q9ULV3 898 aaPredicted RBP11.83□□□□□ -0.52
ZNF235-204ENST00000589799 PBRM1Q86U86 1689 aa11.83□□□□□ -0.52
ZNF235-204ENST00000589799 SYNJ2O15056 1496 aa11.83□□□□□ -0.52
ZNF235-204ENST00000589799 FGD5Q6ZNL6 1462 aa11.83□□□□□ -0.52
ZNF235-204ENST00000589799 GRIN2BQ13224 1484 aa11.82□□□□□ -0.52
ZNF235-204ENST00000589799 RGL2O15211 777 aa11.79□□□□□ -0.52
ZNF235-204ENST00000589799 VSIG10Q8N0Z9 540 aa11.78□□□□□ -0.52
ZNF235-204ENST00000589799 PAXIP1Q6ZW49 1069 aaPredicted RBP11.75□□□□□ -0.53
ZNF235-204ENST00000589799 CUX1P39880 1505 aa11.75□□□□□ -0.53
ZNF235-204ENST00000589799 KIF13AQ9H1H9 1805 aa11.74□□□□□ -0.53
ZNF235-204ENST00000589799 NPM1P06748 294 aaKnown RBP eCLIP11.74□□□□□ -0.53
ZNF235-204ENST00000589799 CFAP44Q96MT7 982 aa11.74□□□□□ -0.53
ZNF235-204ENST00000589799 ERCC6L2Q5T890 1561 aa11.74□□□□□ -0.53
ZNF235-204ENST00000589799 BCANQ96GW7 911 aa11.71□□□□□ -0.53
ZNF235-204ENST00000589799 ABCA5Q8WWZ7 1642 aa11.71□□□□□ -0.54
ZNF235-204ENST00000589799 CEP170Q5SW79 1584 aa11.7□□□□□ -0.54
ZNF235-204ENST00000589799 RBM42Q9BTD8 480 aaKnown RBP11.69□□□□□ -0.54
ZNF235-204ENST00000589799 CHGAP10645 457 aaKnown RBP11.68□□□□□ -0.54
ZNF235-204ENST00000589799 SPRYD3Q8NCJ5 442 aa11.68□□□□□ -0.54
ZNF235-204ENST00000589799 SPDYE1Q8NFV5 336 aaPredicted RBP11.68□□□□□ -0.54
ZNF235-204ENST00000589799 GRIN2AQ12879 1464 aa11.68□□□□□ -0.54
ZNF235-204ENST00000589799 GSE1Q14687 1217 aa11.67□□□□□ -0.54
ZNF235-204ENST00000589799 ADAMTS12P58397 1594 aa11.66□□□□□ -0.54
ZNF235-204ENST00000589799 SHROOM2Q13796 1616 aa11.65□□□□□ -0.54
ZNF235-204ENST00000589799 ABCA10Q8WWZ4 1543 aa11.65□□□□□ -0.55
ZNF235-204ENST00000589799 AKT1S1Q96B36 256 aa11.63□□□□□ -0.55
ZNF235-204ENST00000589799 NUP160Q12769 1436 aa11.62□□□□□ -0.55
ZNF235-204ENST00000589799 CLEC11AQ9Y240 323 aa11.61□□□□□ -0.55
ZNF235-204ENST00000589799 ILDR1Q86SU0 546 aaPredicted RBP11.6□□□□□ -0.55
ZNF235-204ENST00000589799 KDM6BO15054 1643 aa11.6□□□□□ -0.55
ZNF235-204ENST00000589799 PRR29P0C7W0 189 aa11.58□□□□□ -0.56
ZNF235-204ENST00000589799 DCAF8Q5TAQ9 597 aa11.58□□□□□ -0.56
ZNF235-204ENST00000589799 FAM69CQ0P6D2 419 aa11.57□□□□□ -0.56
ZNF235-204ENST00000589799 TAOK2Q9UL54 1235 aa11.57□□□□□ -0.56
ZNF235-204ENST00000589799 DIP2BQ9P265 1576 aa11.57□□□□□ -0.56
ZNF235-204ENST00000589799 TSPOAP1O95153 1857 aa11.57□□□□□ -0.56
ZNF235-204ENST00000589799 ABCC10Q5T3U5 1492 aa11.57□□□□□ -0.56
ZNF235-204ENST00000589799 FHAD1B1AJZ9 1412 aa11.56□□□□□ -0.56
ZNF235-204ENST00000589799 NUBP1P53384 320 aa11.56□□□□□ -0.56
ZNF235-204ENST00000589799 KDM2AQ9Y2K7 1162 aa11.56□□□□□ -0.56
ZNF235-204ENST00000589799 PRG4Q92954 1404 aaPredicted RBP11.55□□□□□ -0.56
ZNF235-204ENST00000589799 HS6ST3Q8IZP7 471 aa11.55□□□□□ -0.56
ZNF235-204ENST00000589799 FAM212AQ96EL1 285 aa11.55□□□□□ -0.56
ZNF235-204ENST00000589799 MAPKBP1O60336 1514 aa11.55□□□□□ -0.56
ZNF235-204ENST00000589799 KDM4FA0A1W2PPD8 638 aa11.53□□□□□ -0.56
ZNF235-204ENST00000589799 WRNQ14191 1432 aaPredicted RBP eCLIP11.52□□□□□ -0.56
ZNF235-204ENST00000589799 TSHZ2Q9NRE2 1034 aa11.52□□□□□ -0.57
ZNF235-204ENST00000589799 ADCY10Q96PN6 1610 aa11.51□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 75.2 ms