RNA–Protein interactions for RNA: ENST00000588284.1

CHMP1B-202, Transcript of charged multivesicular body protein 1B, humanhuman

TSL 3

Gene CHMP1B, Length 435 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1B-202ENST00000588284 CEP162Q5TB80 1403 aa16.64■□□□□ 0.25
CHMP1B-202ENST00000588284 FHAD1B1AJZ9 1412 aa16.62■□□□□ 0.25
CHMP1B-202ENST00000588284 CLIP1P30622 1438 aa16.58■□□□□ 0.24
CHMP1B-202ENST00000588284 PBRM1Q86U86 1689 aa16.58■□□□□ 0.24
CHMP1B-202ENST00000588284 EIF4G3O43432 1585 aaKnown RBP16.55■□□□□ 0.24
CHMP1B-202ENST00000588284 MAGI1Q96QZ7 1491 aaPredicted RBP16.54■□□□□ 0.24
CHMP1B-202ENST00000588284 SCAF1Q9H7N4 1312 aaKnown RBP16.54■□□□□ 0.24
CHMP1B-202ENST00000588284 CHMP7Q8WUX9 453 aaPredicted RBP16.52■□□□□ 0.24
CHMP1B-202ENST00000588284 SNAPC4Q5SXM2 1469 aa16.51■□□□□ 0.23
CHMP1B-202ENST00000588284 RANGAP1P46060 587 aaPredicted RBP16.51■□□□□ 0.23
CHMP1B-202ENST00000588284 ADAMTS12P58397 1594 aa16.51■□□□□ 0.23
CHMP1B-202ENST00000588284 SYNJ2O15056 1496 aa16.47■□□□□ 0.23
CHMP1B-202ENST00000588284 FBLN2P98095 1184 aa16.45■□□□□ 0.22
CHMP1B-202ENST00000588284 GRIN2AQ12879 1464 aa16.43■□□□□ 0.22
CHMP1B-202ENST00000588284 CTTNBP2Q8WZ74 1663 aa16.42■□□□□ 0.22
CHMP1B-202ENST00000588284 VPS8Q8N3P4 1428 aa16.41■□□□□ 0.22
CHMP1B-202ENST00000588284 APLP2Q06481 763 aa16.4■□□□□ 0.22
CHMP1B-202ENST00000588284 ARHGAP35Q9NRY4 1499 aa16.4■□□□□ 0.22
CHMP1B-202ENST00000588284 KIAA0586Q9BVV6 1533 aa16.4■□□□□ 0.22
CHMP1B-202ENST00000588284 EFCAB5A4FU69 1503 aa16.38■□□□□ 0.21
CHMP1B-202ENST00000588284 ARAP1Q96P48 1450 aa16.35■□□□□ 0.21
CHMP1B-202ENST00000588284 IQGAP2Q13576 1575 aa16.34■□□□□ 0.21
CHMP1B-202ENST00000588284 P3H3Q8IVL6 736 aa16.33■□□□□ 0.2
CHMP1B-202ENST00000588284 NUP160Q12769 1436 aa16.33■□□□□ 0.2
CHMP1B-202ENST00000588284 KCNA4P22459 653 aa16.32■□□□□ 0.2
CHMP1B-202ENST00000588284 NCBP3Q53F19 620 aaKnown RBP16.3■□□□□ 0.2
CHMP1B-202ENST00000588284 JPH4Q96JJ6 628 aa16.3■□□□□ 0.2
CHMP1B-202ENST00000588284 UGGT2Q9NYU1 1516 aa16.29■□□□□ 0.2
CHMP1B-202ENST00000588284 MAPK8IP2Q13387 824 aaPredicted RBP16.29■□□□□ 0.2
CHMP1B-202ENST00000588284 FMN1Q68DA7 1419 aa16.28■□□□□ 0.2
CHMP1B-202ENST00000588284 TRIM26Q12899 539 aaPredicted RBP16.28■□□□□ 0.2
CHMP1B-202ENST00000588284 SAMD9Q5K651 1589 aa16.26■□□□□ 0.19
CHMP1B-202ENST00000588284 CEP170Q5SW79 1584 aa16.26■□□□□ 0.19
CHMP1B-202ENST00000588284 FHOD3Q2V2M9 1422 aa16.26■□□□□ 0.19
CHMP1B-202ENST00000588284 CARMIL2Q6F5E8 1435 aa16.25■□□□□ 0.19
CHMP1B-202ENST00000588284 PPARGC1BQ86YN6 1023 aaKnown RBP16.22■□□□□ 0.19
CHMP1B-202ENST00000588284 CHD1O14646 1710 aa16.21■□□□□ 0.19
CHMP1B-202ENST00000588284 CASKIN1Q8WXD9 1431 aa16.2■□□□□ 0.18
CHMP1B-202ENST00000588284 CNKSR2Q8WXI2 1034 aa16.2■□□□□ 0.18
CHMP1B-202ENST00000588284 ATP1B4Q9UN42 357 aaPredicted RBP16.2■□□□□ 0.18
CHMP1B-202ENST00000588284 MAP3K1Q13233 1512 aa16.19■□□□□ 0.18
CHMP1B-202ENST00000588284 DISP1Q96F81 1524 aa16.18■□□□□ 0.18
CHMP1B-202ENST00000588284 FYCO1Q9BQS8 1478 aa16.16■□□□□ 0.18
CHMP1B-202ENST00000588284 PCGF6Q9BYE7 350 aa16.16■□□□□ 0.18
CHMP1B-202ENST00000588284 OSCARQ8IYS5 282 aa16.15■□□□□ 0.18
CHMP1B-202ENST00000588284 KIAA0556O60303 1618 aa16.15■□□□□ 0.18
CHMP1B-202ENST00000588284 PRG4Q92954 1404 aaPredicted RBP16.13■□□□□ 0.17
CHMP1B-202ENST00000588284 KANK4Q5T7N3 995 aaPredicted RBP16.1■□□□□ 0.17
CHMP1B-202ENST00000588284 DMRT2Q9Y5R5 561 aa16.1■□□□□ 0.17
CHMP1B-202ENST00000588284 PCF11O94913 1555 aaKnown RBP16.09■□□□□ 0.17
CHMP1B-202ENST00000588284 TTBK1Q5TCY1 1321 aaPredicted RBP16.08■□□□□ 0.16
CHMP1B-202ENST00000588284 CLASP1Q7Z460 1538 aa16.08■□□□□ 0.16
CHMP1B-202ENST00000588284 TIAM1Q13009 1591 aa16.08■□□□□ 0.16
CHMP1B-202ENST00000588284 PTPRGP23470 1445 aa16.07■□□□□ 0.16
CHMP1B-202ENST00000588284 SHROOM2Q13796 1616 aa16.07■□□□□ 0.16
CHMP1B-202ENST00000588284 CCDC18Q5T9S5 1454 aa16.05■□□□□ 0.16
CHMP1B-202ENST00000588284 LRRC9Q6ZRR7 1453 aa16.04■□□□□ 0.16
CHMP1B-202ENST00000588284 CDK11AQ9UQ88 783 aaPredicted RBP16.04■□□□□ 0.16
CHMP1B-202ENST00000588284 HECW1Q76N89 1606 aa16.04■□□□□ 0.16
CHMP1B-202ENST00000588284 MTUS2Q5JR59 1369 aa16.01■□□□□ 0.15
CHMP1B-202ENST00000588284 CFAP43Q8NDM7 1665 aa16■□□□□ 0.15
CHMP1B-202ENST00000588284 RAPGEF6Q8TEU7 1601 aa16■□□□□ 0.15
CHMP1B-202ENST00000588284 EPRSP07814 1512 aaKnown RBP15.99■□□□□ 0.15
CHMP1B-202ENST00000588284 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP15.99■□□□□ 0.15
CHMP1B-202ENST00000588284 NPM3O75607 178 aaKnown RBP15.99■□□□□ 0.15
CHMP1B-202ENST00000588284 HNRNPUL2Q1KMD3 747 aaKnown RBP15.99■□□□□ 0.15
CHMP1B-202ENST00000588284 PLB1Q6P1J6 1458 aa15.97■□□□□ 0.15
CHMP1B-202ENST00000588284 NUP153P49790 1475 aaKnown RBP15.96■□□□□ 0.14
CHMP1B-202ENST00000588284 UACAQ9BZF9 1416 aa15.95■□□□□ 0.14
CHMP1B-202ENST00000588284 ABCA8O94911 1581 aa15.95■□□□□ 0.14
CHMP1B-202ENST00000588284 PLEKHD1A6NEE1 506 aa15.94■□□□□ 0.14
CHMP1B-202ENST00000588284 ARID3CA6NKF2 412 aa15.92■□□□□ 0.14
CHMP1B-202ENST00000588284 EHBP1L1Q8N3D4 1523 aa15.92■□□□□ 0.14
CHMP1B-202ENST00000588284 RIMBP3CA6NJZ7 1639 aa15.91■□□□□ 0.14
CHMP1B-202ENST00000588284 RIMBP3BA6NNM3 1639 aa15.91■□□□□ 0.14
CHMP1B-202ENST00000588284 RIMBP3Q9UFD9 1639 aa15.91■□□□□ 0.14
CHMP1B-202ENST00000588284 ERCC6L2Q5T890 1561 aa15.9■□□□□ 0.14
CHMP1B-202ENST00000588284 LRRIQ1Q96JM4 1722 aa15.9■□□□□ 0.14
CHMP1B-202ENST00000588284 CDK13Q14004 1512 aaKnown RBP15.89■□□□□ 0.13
CHMP1B-202ENST00000588284 RRBP1Q9P2E9 1410 aaKnown RBP15.89■□□□□ 0.13
CHMP1B-202ENST00000588284 ATP10BO94823 1461 aa15.89■□□□□ 0.13
CHMP1B-202ENST00000588284 CCNB3Q8WWL7 1395 aa15.87■□□□□ 0.13
CHMP1B-202ENST00000588284 UHRF1BP1LA0JNW5 1464 aa15.87■□□□□ 0.13
CHMP1B-202ENST00000588284 RNF216Q9NWF9 866 aaPredicted RBP15.87■□□□□ 0.13
CHMP1B-202ENST00000588284 SUPT6HQ7KZ85 1726 aaKnown RBP15.86■□□□□ 0.13
CHMP1B-202ENST00000588284 PHLDB1Q86UU1 1377 aa15.86■□□□□ 0.13
CHMP1B-202ENST00000588284 TROQ12816 1431 aaPredicted RBP15.85■□□□□ 0.13
CHMP1B-202ENST00000588284 NCOA2Q15596 1464 aa15.85■□□□□ 0.13
CHMP1B-202ENST00000588284 ABCC2Q92887 1545 aa15.85■□□□□ 0.13
CHMP1B-202ENST00000588284 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP15.85■□□□□ 0.13
CHMP1B-202ENST00000588284 MAGI3Q5TCQ9 1506 aa15.83■□□□□ 0.12
CHMP1B-202ENST00000588284 MYOM3Q5VTT5 1437 aa15.81■□□□□ 0.12
CHMP1B-202ENST00000588284 ARHGEF11O15085 1522 aa15.8■□□□□ 0.12
CHMP1B-202ENST00000588284 NPM1P06748 294 aaKnown RBP eCLIP15.8■□□□□ 0.12
CHMP1B-202ENST00000588284 FAM50AQ14320 339 aaKnown RBP15.8■□□□□ 0.12
CHMP1B-202ENST00000588284 FGD6Q6ZV73 1430 aa15.78■□□□□ 0.12
CHMP1B-202ENST00000588284 MIA2Q96PC5 1412 aa15.78■□□□□ 0.12
CHMP1B-202ENST00000588284 KDM5BQ9UGL1 1544 aa15.78■□□□□ 0.12
CHMP1B-202ENST00000588284 HOXD11P31277 338 aaPredicted RBP15.77■□□□□ 0.12
CHMP1B-202ENST00000588284 ADCY10Q96PN6 1610 aa15.73■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms