RNA–Protein interactions for RNA: ENST00000587788.1

SDF2-206, Transcript of stromal cell derived factor 2, humanhuman

TSL 3

Gene SDF2, Length 444 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF2-206ENST00000587788 URB2Q14146 1524 aaKnown RBP9.66□□□□□ -0.86
SDF2-206ENST00000587788 FBXO3Q9UK99 471 aa9.62□□□□□ -0.87
SDF2-206ENST00000587788 TOPBP1Q92547 1522 aa9.58□□□□□ -0.88
SDF2-206ENST00000587788 DNMBPQ6XZF7 1577 aa9.58□□□□□ -0.88
SDF2-206ENST00000587788 TARBP1Q13395 1621 aaKnown RBP9.53□□□□□ -0.88
SDF2-206ENST00000587788 CUX1P39880 1505 aa9.52□□□□□ -0.88
SDF2-206ENST00000587788 VASPP50552 380 aaPredicted RBP9.52□□□□□ -0.89
SDF2-206ENST00000587788 OSCARQ8IYS5 282 aa9.52□□□□□ -0.89
SDF2-206ENST00000587788 SSUH2Q9Y2M2 353 aa9.52□□□□□ -0.89
SDF2-206ENST00000587788 ABCC8Q09428 1581 aa9.51□□□□□ -0.89
SDF2-206ENST00000587788 SPDYE2BA6NHP3 402 aa9.51□□□□□ -0.89
SDF2-206ENST00000587788 SPDYE6P0CI01 402 aa9.51□□□□□ -0.89
SDF2-206ENST00000587788 CACNB1Q02641 598 aaPredicted RBP9.51□□□□□ -0.89
SDF2-206ENST00000587788 SPDYE2Q495Y8 402 aa9.51□□□□□ -0.89
SDF2-206ENST00000587788 WDR97A6NE52 1622 aa9.5□□□□□ -0.89
SDF2-206ENST00000587788 EIF4G3O43432 1585 aaKnown RBP9.5□□□□□ -0.89
SDF2-206ENST00000587788 POLA1P09884 1462 aaPredicted RBP9.49□□□□□ -0.89
SDF2-206ENST00000587788 ZNF608Q9ULD9 1512 aaPredicted RBP9.49□□□□□ -0.89
SDF2-206ENST00000587788 BIVM-ERCC5R4GMW8 1640 aa9.48□□□□□ -0.89
SDF2-206ENST00000587788 FGD5Q6ZNL6 1462 aa9.47□□□□□ -0.89
SDF2-206ENST00000587788 IFT140Q96RY7 1462 aa9.47□□□□□ -0.89
SDF2-206ENST00000587788 SYNJ1O43426 1573 aa9.46□□□□□ -0.89
SDF2-206ENST00000587788 ZNF692Q9BU19 519 aaPredicted RBP9.46□□□□□ -0.9
SDF2-206ENST00000587788 RAD54L2Q9Y4B4 1467 aa9.46□□□□□ -0.9
SDF2-206ENST00000587788 TOP2BQ02880 1626 aa9.44□□□□□ -0.9
SDF2-206ENST00000587788 CHD1O14646 1710 aa9.43□□□□□ -0.9
SDF2-206ENST00000587788 PBRM1Q86U86 1689 aa9.43□□□□□ -0.9
SDF2-206ENST00000587788 IFNLR1Q8IU57 520 aaPredicted RBP9.41□□□□□ -0.9
SDF2-206ENST00000587788 DNAJC5Q9H3Z4 198 aa9.41□□□□□ -0.9
SDF2-206ENST00000587788 SOGA1O94964 1423 aa9.4□□□□□ -0.9
SDF2-206ENST00000587788 AQRO60306 1485 aaKnown RBP eCLIP9.4□□□□□ -0.91
SDF2-206ENST00000587788 WRNQ14191 1432 aaPredicted RBP eCLIP9.39□□□□□ -0.91
SDF2-206ENST00000587788 ABCA5Q8WWZ7 1642 aa9.39□□□□□ -0.91
SDF2-206ENST00000587788 TDRD9Q8NDG6 1382 aaKnown RBP9.37□□□□□ -0.91
SDF2-206ENST00000587788 ABCA10Q8WWZ4 1543 aa9.36□□□□□ -0.91
SDF2-206ENST00000587788 STAG3Q9UJ98 1225 aa9.35□□□□□ -0.91
SDF2-206ENST00000587788 SNAPC4Q5SXM2 1469 aa9.34□□□□□ -0.91
SDF2-206ENST00000587788 GAPVD1Q14C86 1478 aa9.32□□□□□ -0.92
SDF2-206ENST00000587788 TRIM41Q8WV44 630 aa9.31□□□□□ -0.92
SDF2-206ENST00000587788 GRIN2BQ13224 1484 aa9.31□□□□□ -0.92
SDF2-206ENST00000587788 SLC24A1O60721 1099 aa9.3□□□□□ -0.92
SDF2-206ENST00000587788 ADAMTS12P58397 1594 aa9.29□□□□□ -0.92
SDF2-206ENST00000587788 MAGI1Q96QZ7 1491 aaPredicted RBP9.29□□□□□ -0.92
SDF2-206ENST00000587788 RIMBP3CA6NJZ7 1639 aa9.27□□□□□ -0.93
SDF2-206ENST00000587788 RIMBP3BA6NNM3 1639 aa9.27□□□□□ -0.93
SDF2-206ENST00000587788 RIMBP3Q9UFD9 1639 aa9.27□□□□□ -0.93
SDF2-206ENST00000587788 SYNJ2O15056 1496 aa9.26□□□□□ -0.93
SDF2-206ENST00000587788 CLASP1Q7Z460 1538 aa9.26□□□□□ -0.93
SDF2-206ENST00000587788 ERICH3Q5RHP9 1530 aa9.25□□□□□ -0.93
SDF2-206ENST00000587788 PKD2Q13563 968 aa9.24□□□□□ -0.93
SDF2-206ENST00000587788 SPOCK2Q92563 424 aa9.23□□□□□ -0.93
SDF2-206ENST00000587788 CEP170Q5SW79 1584 aa9.23□□□□□ -0.93
SDF2-206ENST00000587788 GRIN2AQ12879 1464 aa9.21□□□□□ -0.93
SDF2-206ENST00000587788 ARHGEF11O15085 1522 aa9.21□□□□□ -0.93
SDF2-206ENST00000587788 RBM42Q9BTD8 480 aaKnown RBP9.21□□□□□ -0.94
SDF2-206ENST00000587788 CUL7Q14999 1698 aa9.2□□□□□ -0.94
SDF2-206ENST00000587788 PLCD3Q8N3E9 789 aa9.19□□□□□ -0.94
SDF2-206ENST00000587788 CHMP7Q8WUX9 453 aaPredicted RBP9.19□□□□□ -0.94
SDF2-206ENST00000587788 AKT1S1Q96B36 256 aa9.19□□□□□ -0.94
SDF2-206ENST00000587788 FHAD1B1AJZ9 1412 aa9.19□□□□□ -0.94
SDF2-206ENST00000587788 RUSC2Q8N2Y8 1516 aa9.18□□□□□ -0.94
SDF2-206ENST00000587788 KIF27Q86VH2 1401 aa9.17□□□□□ -0.94
SDF2-206ENST00000587788 KLHL34Q8N239 644 aa9.17□□□□□ -0.94
SDF2-206ENST00000587788 SHROOM2Q13796 1616 aa9.16□□□□□ -0.94
SDF2-206ENST00000587788 NUP160Q12769 1436 aa9.16□□□□□ -0.94
SDF2-206ENST00000587788 MIER1Q8N108 512 aa9.16□□□□□ -0.94
SDF2-206ENST00000587788 ERCC6L2Q5T890 1561 aa9.16□□□□□ -0.94
SDF2-206ENST00000587788 ARAP1Q96P48 1450 aa9.15□□□□□ -0.94
SDF2-206ENST00000587788 LOC105371045A0A1W2PR82 267 aa9.15□□□□□ -0.94
SDF2-206ENST00000587788 IGF1RP08069 1367 aa9.14□□□□□ -0.95
SDF2-206ENST00000587788 SPDYE1Q8NFV5 336 aaPredicted RBP9.12□□□□□ -0.95
SDF2-206ENST00000587788 ZBTB47Q9UFB7 747 aaPredicted RBP9.11□□□□□ -0.95
SDF2-206ENST00000587788 CTTNBP2Q8WZ74 1663 aa9.1□□□□□ -0.95
SDF2-206ENST00000587788 REM2Q8IYK8 340 aaPredicted RBP9.09□□□□□ -0.95
SDF2-206ENST00000587788 CARMIL1Q5VZK9 1371 aa9.09□□□□□ -0.95
SDF2-206ENST00000587788 PLEKHG5O94827 1062 aa9.08□□□□□ -0.96
SDF2-206ENST00000587788 CYB5RLQ6IPT4 315 aa9.06□□□□□ -0.96
SDF2-206ENST00000587788 KIAA0586Q9BVV6 1533 aa9.05□□□□□ -0.96
SDF2-206ENST00000587788 IQGAP2Q13576 1575 aa9.05□□□□□ -0.96
SDF2-206ENST00000587788 RAPGEF2Q9Y4G8 1499 aa9.05□□□□□ -0.96
SDF2-206ENST00000587788 ECM2O94769 699 aaPredicted RBP9.05□□□□□ -0.96
SDF2-206ENST00000587788 EEA1Q15075 1411 aa9.05□□□□□ -0.96
SDF2-206ENST00000587788 TRIM26Q12899 539 aaPredicted RBP9.04□□□□□ -0.96
SDF2-206ENST00000587788 PRG4Q92954 1404 aaPredicted RBP9.04□□□□□ -0.96
SDF2-206ENST00000587788 PRXQ9BXM0 1461 aa9.03□□□□□ -0.96
SDF2-206ENST00000587788 HRCP23327 699 aa9.03□□□□□ -0.96
SDF2-206ENST00000587788 PLCB2Q00722 1185 aa9.03□□□□□ -0.96
SDF2-206ENST00000587788 FAM9AQ8IZU1 332 aaPredicted RBP9.03□□□□□ -0.96
SDF2-206ENST00000587788 PCGF6Q9BYE7 350 aa9.03□□□□□ -0.96
SDF2-206ENST00000587788 CREBZFQ9NS37 354 aa9.02□□□□□ -0.97
SDF2-206ENST00000587788 MNX1P50219 401 aaPredicted RBP9.01□□□□□ -0.97
SDF2-206ENST00000587788 JPH4Q96JJ6 628 aa9.01□□□□□ -0.97
SDF2-206ENST00000587788 RGL2O15211 777 aa9□□□□□ -0.97
SDF2-206ENST00000587788 NUBP1P53384 320 aa9□□□□□ -0.97
SDF2-206ENST00000587788 ADCY10Q96PN6 1610 aa8.99□□□□□ -0.97
SDF2-206ENST00000587788 PITPNM1O00562 1244 aa8.99□□□□□ -0.97
SDF2-206ENST00000587788 PRR29P0C7W0 189 aa8.99□□□□□ -0.97
SDF2-206ENST00000587788 CLEC11AQ9Y240 323 aa8.99□□□□□ -0.97
SDF2-206ENST00000587788 DISP1Q96F81 1524 aa8.99□□□□□ -0.97
SDF2-206ENST00000587788 UGGT2Q9NYU1 1516 aa8.99□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 76.2 ms