RNA–Protein interactions for RNA: ENST00000587483.5

RUNDC3A-203, Transcript of RUN domain containing 3A, humanhuman

TSL 2

Gene RUNDC3A, Length 3,686 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RUNDC3A-203ENST00000587483 CFTRP13569 1480 aa15.93■□□□□ 0.14
RUNDC3A-203ENST00000587483 TRIM52Q96A61 297 aa15.92■□□□□ 0.14
RUNDC3A-203ENST00000587483 MAPKBP1O60336 1514 aa15.9■□□□□ 0.14
RUNDC3A-203ENST00000587483 FKBP8Q14318 412 aa15.9■□□□□ 0.14
RUNDC3A-203ENST00000587483 CC2D2AQ9P2K1 1620 aa15.89■□□□□ 0.13
RUNDC3A-203ENST00000587483 TIAM1Q13009 1591 aa15.88■□□□□ 0.13
RUNDC3A-203ENST00000587483 IGF1RP08069 1367 aa15.87■□□□□ 0.13
RUNDC3A-203ENST00000587483 NEFLP07196 543 aa15.87■□□□□ 0.13
RUNDC3A-203ENST00000587483 ARID3CA6NKF2 412 aa15.84■□□□□ 0.13
RUNDC3A-203ENST00000587483 SETD5Q9C0A6 1442 aa15.84■□□□□ 0.13
RUNDC3A-203ENST00000587483 PHLDB1Q86UU1 1377 aa15.83■□□□□ 0.12
RUNDC3A-203ENST00000587483 LRRC9Q6ZRR7 1453 aa15.82■□□□□ 0.12
RUNDC3A-203ENST00000587483 CARMIL1Q5VZK9 1371 aa15.82■□□□□ 0.12
RUNDC3A-203ENST00000587483 WDR97A6NE52 1622 aa15.81■□□□□ 0.12
RUNDC3A-203ENST00000587483 PRDM2Q13029 1718 aa15.8■□□□□ 0.12
RUNDC3A-203ENST00000587483 MAP3K1Q13233 1512 aa15.8■□□□□ 0.12
RUNDC3A-203ENST00000587483 TSHZ2Q9NRE2 1034 aa15.79■□□□□ 0.12
RUNDC3A-203ENST00000587483 IRX6P78412 446 aaPredicted RBP15.78■□□□□ 0.12
RUNDC3A-203ENST00000587483 FGD5Q6ZNL6 1462 aa15.78■□□□□ 0.12
RUNDC3A-203ENST00000587483 BCL11AQ9H165 835 aa15.77■□□□□ 0.12
RUNDC3A-203ENST00000587483 PCF11O94913 1555 aaKnown RBP15.75■□□□□ 0.11
RUNDC3A-203ENST00000587483 ANP32CO43423 234 aa15.74■□□□□ 0.11
RUNDC3A-203ENST00000587483 POLR3GLQ9BT43 218 aa15.74■□□□□ 0.11
RUNDC3A-203ENST00000587483 FHAD1B1AJZ9 1412 aa15.73■□□□□ 0.11
RUNDC3A-203ENST00000587483 CFAP43Q8NDM7 1665 aa15.73■□□□□ 0.11
RUNDC3A-203ENST00000587483 CADPSQ9ULU8 1353 aa15.72■□□□□ 0.11
RUNDC3A-203ENST00000587483 SENP3-EIF4A1A0A087X0R7 540 aa15.71■□□□□ 0.1
RUNDC3A-203ENST00000587483 FHOD3Q2V2M9 1422 aa15.7■□□□□ 0.1
RUNDC3A-203ENST00000587483 CHIC2Q9UKJ5 165 aa15.7■□□□□ 0.1
RUNDC3A-203ENST00000587483 PPP1R15AO75807 674 aaPredicted RBP15.69■□□□□ 0.1
RUNDC3A-203ENST00000587483 NESP48681 1621 aa15.66■□□□□ 0.1
RUNDC3A-203ENST00000587483 HNRNPUQ00839 825 aaKnown RBP eCLIP15.63■□□□□ 0.09
RUNDC3A-203ENST00000587483 TIMELESSQ9UNS1 1208 aa15.63■□□□□ 0.09
RUNDC3A-203ENST00000587483 RAD54L2Q9Y4B4 1467 aa15.62■□□□□ 0.09
RUNDC3A-203ENST00000587483 FYCO1Q9BQS8 1478 aa15.62■□□□□ 0.09
RUNDC3A-203ENST00000587483 PRKCSHP14314 528 aaPredicted RBP15.62■□□□□ 0.09
RUNDC3A-203ENST00000587483 ERICH6Q7L0X2 663 aa15.61■□□□□ 0.09
RUNDC3A-203ENST00000587483 RRP7BPQ9NSQ0 103 aa15.6■□□□□ 0.09
RUNDC3A-203ENST00000587483 CASKIN1Q8WXD9 1431 aa15.6■□□□□ 0.09
RUNDC3A-203ENST00000587483 FANCD2Q9BXW9 1451 aa15.59■□□□□ 0.09
RUNDC3A-203ENST00000587483 TONSLQ96HA7 1378 aa15.59■□□□□ 0.09
RUNDC3A-203ENST00000587483 FGD6Q6ZV73 1430 aa15.57■□□□□ 0.08
RUNDC3A-203ENST00000587483 EFCAB5A4FU69 1503 aa15.57■□□□□ 0.08
RUNDC3A-203ENST00000587483 CCER2I3L3R5 266 aa15.57■□□□□ 0.08
RUNDC3A-203ENST00000587483 ANP32EQ9BTT0 268 aa15.57■□□□□ 0.08
RUNDC3A-203ENST00000587483 CCDC18Q5T9S5 1454 aa15.56■□□□□ 0.08
RUNDC3A-203ENST00000587483 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP15.55■□□□□ 0.08
RUNDC3A-203ENST00000587483 FAM9BQ8IZU0 186 aa15.55■□□□□ 0.08
RUNDC3A-203ENST00000587483 ZNF326Q5BKZ1 582 aaKnown RBP15.55■□□□□ 0.08
RUNDC3A-203ENST00000587483 POLA1P09884 1462 aaPredicted RBP15.54■□□□□ 0.08
RUNDC3A-203ENST00000587483 CTTNBP2Q8WZ74 1663 aa15.54■□□□□ 0.08
RUNDC3A-203ENST00000587483 AQRO60306 1485 aaKnown RBP eCLIP15.54■□□□□ 0.08
RUNDC3A-203ENST00000587483 ABCA10Q8WWZ4 1543 aa15.54■□□□□ 0.08
RUNDC3A-203ENST00000587483 PTPRKQ15262 1439 aa15.54■□□□□ 0.08
RUNDC3A-203ENST00000587483 MTUS2Q5JR59 1369 aa15.54■□□□□ 0.08
RUNDC3A-203ENST00000587483 DNMBPQ6XZF7 1577 aa15.53■□□□□ 0.08
RUNDC3A-203ENST00000587483 TOPBP1Q92547 1522 aa15.52■□□□□ 0.07
RUNDC3A-203ENST00000587483 FMN1Q68DA7 1419 aa15.51■□□□□ 0.07
RUNDC3A-203ENST00000587483 FOXD1Q16676 465 aa15.51■□□□□ 0.07
RUNDC3A-203ENST00000587483 SNAPC4Q5SXM2 1469 aa15.5■□□□□ 0.07
RUNDC3A-203ENST00000587483 CUL7Q14999 1698 aa15.5■□□□□ 0.07
RUNDC3A-203ENST00000587483 PTPN23Q9H3S7 1636 aa15.5■□□□□ 0.07
RUNDC3A-203ENST00000587483 UACAQ9BZF9 1416 aa15.5■□□□□ 0.07
RUNDC3A-203ENST00000587483 HFM1A2PYH4 1435 aa15.5■□□□□ 0.07
RUNDC3A-203ENST00000587483 RBM19Q9Y4C8 960 aaKnown RBP15.48■□□□□ 0.07
RUNDC3A-203ENST00000587483 LRRIQ1Q96JM4 1722 aa15.48■□□□□ 0.07
RUNDC3A-203ENST00000587483 NAIPQ13075 1403 aa15.46■□□□□ 0.07
RUNDC3A-203ENST00000587483 NCOA2Q15596 1464 aa15.46■□□□□ 0.06
RUNDC3A-203ENST00000587483 ERCC6Q03468 1493 aa15.45■□□□□ 0.06
RUNDC3A-203ENST00000587483 MYOM3Q5VTT5 1437 aa15.44■□□□□ 0.06
RUNDC3A-203ENST00000587483 CDK11AQ9UQ88 783 aaPredicted RBP15.43■□□□□ 0.06
RUNDC3A-203ENST00000587483 PDS5BQ9NTI5 1447 aa15.43■□□□□ 0.06
RUNDC3A-203ENST00000587483 KDM5BQ9UGL1 1544 aa15.42■□□□□ 0.06
RUNDC3A-203ENST00000587483 TDRD9Q8NDG6 1382 aaKnown RBP15.42■□□□□ 0.06
RUNDC3A-203ENST00000587483 FBLN2P98095 1184 aa15.41■□□□□ 0.06
RUNDC3A-203ENST00000587483 SAMD9Q5K651 1589 aa15.4■□□□□ 0.06
RUNDC3A-203ENST00000587483 SUPT6HQ7KZ85 1726 aaKnown RBP15.4■□□□□ 0.06
RUNDC3A-203ENST00000587483 GRIN2BQ13224 1484 aa15.4■□□□□ 0.06
RUNDC3A-203ENST00000587483 HSPA5P11021 654 aaKnown RBP15.38■□□□□ 0.05
RUNDC3A-203ENST00000587483 WASHC2AQ641Q2 1341 aa15.37■□□□□ 0.05
RUNDC3A-203ENST00000587483 MRS2Q9HD23 443 aa15.37■□□□□ 0.05
RUNDC3A-203ENST00000587483 ZNF777Q9ULD5 760 aaPredicted RBP15.37■□□□□ 0.05
RUNDC3A-203ENST00000587483 SALL2Q9Y467 1007 aaPredicted RBP15.37■□□□□ 0.05
RUNDC3A-203ENST00000587483 URB2Q14146 1524 aaKnown RBP15.36■□□□□ 0.05
RUNDC3A-203ENST00000587483 EHBP1L1Q8N3D4 1523 aa15.36■□□□□ 0.05
RUNDC3A-203ENST00000587483 B4GALNT3Q6L9W6 998 aa15.36■□□□□ 0.05
RUNDC3A-203ENST00000587483 MAGI3Q5TCQ9 1506 aa15.35■□□□□ 0.05
RUNDC3A-203ENST00000587483 UGGT2Q9NYU1 1516 aa15.34■□□□□ 0.05
RUNDC3A-203ENST00000587483 GAPVD1Q14C86 1478 aa15.34■□□□□ 0.05
RUNDC3A-203ENST00000587483 ABCA5Q8WWZ7 1642 aa15.34■□□□□ 0.05
RUNDC3A-203ENST00000587483 DENND4BO75064 1496 aaPredicted RBP15.33■□□□□ 0.04
RUNDC3A-203ENST00000587483 THOC2Q8NI27 1593 aaKnown RBP15.33■□□□□ 0.04
RUNDC3A-203ENST00000587483 KDM6BO15054 1643 aa15.32■□□□□ 0.04
RUNDC3A-203ENST00000587483 EIF4G2P78344 907 aaKnown RBP eCLIP15.32■□□□□ 0.04
RUNDC3A-203ENST00000587483 CCDC184Q52MB2 194 aa15.31■□□□□ 0.04
RUNDC3A-203ENST00000587483 ARHGEF11O15085 1522 aa15.3■□□□□ 0.04
RUNDC3A-203ENST00000587483 GCC2Q8IWJ2 1684 aa15.3■□□□□ 0.04
RUNDC3A-203ENST00000587483 HECW1Q76N89 1606 aa15.3■□□□□ 0.04
RUNDC3A-203ENST00000587483 MSH5O43196 834 aa15.28■□□□□ 0.04
RUNDC3A-203ENST00000587483 L3MBTL2Q969R5 705 aa15.28■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms